CsaV3_1G001160 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G001160
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	ATP-dependent RNA helicase
Location	chr1 : 646275 .. 650322 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCCTTATGACCATAGATACGCCGATCCTAATTCCTACCGCGACCGTCGAAGGTAATGTTTGTATTTTGAATTTATTTTTCTTTTTCTTGATTTCCCTATGGTGCTTATGATCTCTCTCCTTTTTCTGGGTGTCTTTTGATCTTAAATCCCCAGTGACCTAGTGGGTTTTCAGCCTGCTGCGCCACCGCCAATAGCAGGGCGTGAATCCTTGTATAAAGGCTACCAACCTCCTCCAGCTCCATACTATGGTCGTGAAAGAGGTGGTGGAGGTGCTTTACCTAATGCTGGAGGCGTCAATGGCCTCCCTCGATTTCAGCCTCCTGCAGGATCGTTTAATATTGGCCGGGGTGGTGGTGGTGGTTTCGGTAGCAGCGGTGGTGGCAGGAGGACGTTTGATGCGGAGAGGGGTGGGAGAAGAATTGGTGGGAGTATTGGTTTTGGAGGTGGACGTGGTGGAGGGACGGGATTTGATGGCCGTGGTGGCGGAAGAGGGGGTGGACGAGGTGGTGGTGGTTCTTCAAGAGGGGATTTGGATAACATTGTCCTTCCGAGTCAGAATTTTGGCAATTTGGTGCCTTTTGAAAAGAATTTCTACACTGAGTGTCCTTCTGTGCGTGCAATGACGGAGTCTGAAGTTAAGATTTATAGAGAGAGACGTGATATTAGGGTGGAAGGATACGATGTCCCGAGACCGATTAGGAGTTTTCAGGAGGCGAATTTTCCTGGTATTTTAAATATTCCATGAATTGAATGAGATTGTATTATGTTCCAGTGTTCAAGAAACTTGTTGATTGTTTCTTTATTTCCTTTGTTAGCTTACTGCCTTGATGTAATTGCGAAATTGGGATTTGTTGAGCCAACTCCAATTCAGGCTCAAGGATGGCCGATGGCCTTGAAAGGAAGAGATTTGGTTGGCATTGCTGAAACTGGCTCTGGGAAGACTCTTGCCTATCTACTGCCAGCTGTAATACACATTAGTGCCCAGCCTCGTTTATGTCAGTGTTGTATTACAGATTTTCAGCCTTAGTTTCTTTTTGTTGCCACTCTTCTTTCGACCATTAACATTGTGATAATTTGTTCTCCATCTACATTCATCCAGCGCGTGGTGAAGGTCCCATTGTGTTGGTGTTAGCACCCACTAGAGAATTAGCTGTTCAAATTCAGCAAGAGGCTACTAAATTCGGACTGCATGCTAATATTAGAAGTACTTGCGTTTATGGTGGGGCTCCAAAAGGGCCTCAAATTCGTGATCTCAAAAATGGTAATTGTGCTCAATGAAATGTTTTTTACTCTGTTTGTTGTTGGTTACTTGCAAGAATTTAGCAACTTCATTGTGTCTCTCAGGTGTTGAGATTGTTATTGCTACACCTGGTCGGCTCATAGATATGCTGGAAGCTGGCCACACAAACTTGCGGCGAGTGACTTACCTTGTTTTAGATGAAGCAGATAGAATGCTGGACATGGGATTTGAGCCTCAAATAAGGACAATCGTTAGCCAAGTATGATATTCCACCACCACTTCCTTCCCCTTTAAATTGATAGATAATGGAATTGCATGTGGAGACTTACAATTACTGTTATTTATGGCTCTAGTTGGGAGCGCTTGACAAACTTTACAGTTTTGATGGTACTTGTGGAAAATTTTCCATTTATTATGAGGCAGTGTTCAGTTCTCAAATTATTCTGAATGTGGAATTGAAAAACGTTCTCTTAAGAGCTCTTTAGAAGAATATCCTATTTATTATCATGTAGTACTCGATTATCAATTCTGTCTAAGAGCATTTTTCTCTTTACAGATCCGACCGGATAGGCAGACATTATATTGGAGTGCCACATGGCCAAGGGAGGTTGAGAAATTGGCTAGACAATTTTTGCGTAATGCATATAAGGTTATATTGAAAAAACCCCTTTGTGTCAATTATCACTCTGCTTCCATATCCCCTGTAGTTGTTAATGTTATAGAAACAGATAATGACAATTAAATGCTGTGATGTGATACATCAGGTCATTATTGGTTCCCCAGATCTTAAAGCTAACCAGTCTATAAACCAAGTTGTTGAAGTTTTGCCAGAGGCTGAGAAATATAGAAGGTTTGTTAAAAGTTTGCGACATTCCACAAAATACGTGAACAACCAACCAGGGAGATTCTCTTCCTATTTTTACATTTATCATATTTTTCTCATGCAGGTTAATAAAATTGCTCGGAGAAGTAATGGATGGTAGTCGTATTCTGATTTTTGTGGAAACAAAAAAGGGCTGTGATAAAGTAACGAGGCAATTGAGAATGGATGGATGGCCAGCTCTATCCATTCACGGTGACAAAAAGCAGGCTGAAAGGGACTTGGTTTTGTCAGAATTTAAGAGTGGGAGAAACCCAATAATGACAGCCACGGATGTGGCTGCAAGAGGGCTTGGTAGGATTACTACATGTCAGGTGTTTTAGGTTTTAATCTAGGCCCCGTTTGATAACAAATTCGTTTTTAGTTTTCTATTTTTAAACTTTATACTTGATTCCTCCAATTTTCTTGGTATCGTTTTCATCTTTCATAAAATACATACATTTGGATTCTTTGTAAACTTCCAAAAACAAAAACAAGATTTAAGAAACAAAAATTTCTTCAAAATTTGACTTGGTTTTTGGAAACATTGTTAGAAAATGGATAGCAAAATATTGAAACTTATAGATGGAAGTAGTGTTTAGAAGCTTACTTTTCAAGAACCAAAAACAAAATGTTTATCAAACGAGGCCTTGCGTGTTCATTTTCAAATTCTAATGAGTCGGCCAGCTGCTGTCCAGTTCCTGAATATAATTTGTGGCTTGGGTGCAGAGGAAAGTTCTATCGTGCAATGTGCAGCATGATGATTGTTAATGTGAGACTGCTTGGTTTCGTCTCCTATTTGAAACTGCATATGCTTTTGGTTTCTTTCTTTGGACTAATGAGATCCTTTTGATTCCCCGCACTGTGACATAGGTTTAGTTTCTTTTGGGCTTTTCTTTTTGCATCCTCTGGGGTAGTGGTGGTGTCTTATGGTGAAGGAAGAAGGTTTGGTTTAAAGGAAACAGACCCTACCCCCTTTTTTTACTGGCTGCAAGTACATTAGCAAGTCATGGCATGAATGTCATATGAACGCAAAGATGATGCTATTTTGAGGTTTTTCAATGATGTTCTTTTCCAGGTTAAAGGGGAGGGAAATCCTATTCTCTATGTATTCAAAGATTTGTAAATCCTCTGTATCAATGGGTCGGTAAAAGGATAACGAGGAAGCAGAGACTTTGATGTTACTTAAAAAGATCATTTCATTGAGGTGCCTGAGATAGTTATTTAACATATTTTGGTCCTCTATAGTTATCCAAGTATTCAGTTGGTACCCATCCACAATTAAGGAGCTGGTTGTTTTTGCAGCCTGGTTGACTCATTCATTATTGCATTGTTGGTATGGAAGTCGTCGTGGTGACAGCTGCTACTTATCCCTGCAAAGTTAAGGTGGGCACATTTATGTAGTAATGAATGTGTTATCGTACTTTTGGTCATCAGATCTTAAGAGTGCAGGGATAAGGTTTTTTGCAGTTTTATCCATGCTCCCATATTGCATGTCTTATTTTATCTAACGTCCACCATCTTTTGTAGATGTGAAAGATATAAAATGTGTGATCAACTTTGATTTCCCATCAAGCCTCGAGGACTACGTCCACAGGATAGGCCGAACGGGTCGTGCTGGTGCAAAGGGAACTGCATTCACATTCTTTACTCATGAGAATGCAAAACACGCTAGAGATCTTATAAAGATACTGCGAGAAGCAGGGCAGATTGTCACCCCTGCGTTGTCTGCTTTAGCCTCATCTAGTGGCTTTGGAGGTAACTTTTCTCGTAATCCACACTAAGTCAGAAGTGGATGATTACAATTTGAACATTATTGTTTCTTGTGTGTTAGGTTCTGGTGCTAAATTTCGCTCCCAAGGACACAGAGGTGGGTTTGGTAATCGAACAATGGTTTCGGGATCAAATGCGATCCCTCTTGGTTTGACGACCAGACCACGCTAG

mRNA sequence

ATGAATCCTTATGACCATAGATACGCCGATCCTAATTCCTACCGCGACCGTCGAAGTGACCTAGTGGGTTTTCAGCCTGCTGCGCCACCGCCAATAGCAGGGCGTGAATCCTTGTATAAAGGCTACCAACCTCCTCCAGCTCCATACTATGGTCGTGAAAGAGGTGGTGGAGGTGCTTTACCTAATGCTGGAGGCGTCAATGGCCTCCCTCGATTTCAGCCTCCTGCAGGATCGTTTAATATTGGCCGGGGTGGTGGTGGTGGTTTCGGTAGCAGCGGTGGTGGCAGGAGGACGTTTGATGCGGAGAGGGGTGGGAGAAGAATTGGTGGGAGTATTGGTTTTGGAGGTGGACGTGGTGGAGGGACGGGATTTGATGGCCGTGGTGGCGGAAGAGGGGGTGGACGAGGTGGTGGTGGTTCTTCAAGAGGGGATTTGGATAACATTGTCCTTCCGAGTCAGAATTTTGGCAATTTGGTGCCTTTTGAAAAGAATTTCTACACTGAGTGTCCTTCTGTGCGTGCAATGACGGAGTCTGAAGTTAAGATTTATAGAGAGAGACGTGATATTAGGGTGGAAGGATACGATGTCCCGAGACCGATTAGGAGTTTTCAGGAGGCGAATTTTCCTGCTTACTGCCTTGATGTAATTGCGAAATTGGGATTTGTTGAGCCAACTCCAATTCAGGCTCAAGGATGGCCGATGGCCTTGAAAGGAAGAGATTTGGTTGGCATTGCTGAAACTGGCTCTGGGAAGACTCTTGCCTATCTACTGCCAGCTGTAATACACATTAGTGCCCAGCCTCGTTTATCGCGTGGTGAAGGTCCCATTGTGTTGGTGTTAGCACCCACTAGAGAATTAGCTGTTCAAATTCAGCAAGAGGCTACTAAATTCGGACTGCATGCTAATATTAGAAGTACTTGCGTTTATGGTGGGGCTCCAAAAGGGCCTCAAATTCGTGATCTCAAAAATGGTGTTGAGATTGTTATTGCTACACCTGGTCGGCTCATAGATATGCTGGAAGCTGGCCACACAAACTTGCGGCGAGTGACTTACCTTGTTTTAGATGAAGCAGATAGAATGCTGGACATGGGATTTGAGCCTCAAATAAGGACAATCGTTAGCCAAATCCGACCGGATAGGCAGACATTATATTGGAGTGCCACATGGCCAAGGGAGGTTGAGAAATTGGCTAGACAATTTTTGCGTAATGCATATAAGGTCATTATTGGTTCCCCAGATCTTAAAGCTAACCAGTCTATAAACCAAGTTGTTGAAGTTTTGCCAGAGGCTGAGAAATATAGAAGGTTAATAAAATTGCTCGGAGAAGTAATGGATGGTAGTCGTATTCTGATTTTTGTGGAAACAAAAAAGGGCTGTGATAAAGTAACGAGGCAATTGAGAATGGATGGATGGCCAGCTCTATCCATTCACGGTGACAAAAAGCAGGCTGAAAGGGACTTGGTTTTGTCAGAATTTAAGAGTGGGAGAAACCCAATAATGACAGCCACGGATGTGGCTGCAAGAGGGCTTGATGTGAAAGATATAAAATGTGTGATCAACTTTGATTTCCCATCAAGCCTCGAGGACTACGTCCACAGGATAGGCCGAACGGGTCGTGCTGGTGCAAAGGGAACTGCATTCACATTCTTTACTCATGAGAATGCAAAACACGCTAGAGATCTTATAAAGATACTGCGAGAAGCAGGGCAGATTGTCACCCCTGCGTTGTCTGCTTTAGCCTCATCTAGTGGCTTTGGAGGTTCTGGTGCTAAATTTCGCTCCCAAGGACACAGAGGTGGGTTTGGTAATCGAACAATGGTTTCGGGATCAAATGCGATCCCTCTTGGTTTGACGACCAGACCACGCTAG

Coding sequence (CDS)

ATGAATCCTTATGACCATAGATACGCCGATCCTAATTCCTACCGCGACCGTCGAAGTGACCTAGTGGGTTTTCAGCCTGCTGCGCCACCGCCAATAGCAGGGCGTGAATCCTTGTATAAAGGCTACCAACCTCCTCCAGCTCCATACTATGGTCGTGAAAGAGGTGGTGGAGGTGCTTTACCTAATGCTGGAGGCGTCAATGGCCTCCCTCGATTTCAGCCTCCTGCAGGATCGTTTAATATTGGCCGGGGTGGTGGTGGTGGTTTCGGTAGCAGCGGTGGTGGCAGGAGGACGTTTGATGCGGAGAGGGGTGGGAGAAGAATTGGTGGGAGTATTGGTTTTGGAGGTGGACGTGGTGGAGGGACGGGATTTGATGGCCGTGGTGGCGGAAGAGGGGGTGGACGAGGTGGTGGTGGTTCTTCAAGAGGGGATTTGGATAACATTGTCCTTCCGAGTCAGAATTTTGGCAATTTGGTGCCTTTTGAAAAGAATTTCTACACTGAGTGTCCTTCTGTGCGTGCAATGACGGAGTCTGAAGTTAAGATTTATAGAGAGAGACGTGATATTAGGGTGGAAGGATACGATGTCCCGAGACCGATTAGGAGTTTTCAGGAGGCGAATTTTCCTGCTTACTGCCTTGATGTAATTGCGAAATTGGGATTTGTTGAGCCAACTCCAATTCAGGCTCAAGGATGGCCGATGGCCTTGAAAGGAAGAGATTTGGTTGGCATTGCTGAAACTGGCTCTGGGAAGACTCTTGCCTATCTACTGCCAGCTGTAATACACATTAGTGCCCAGCCTCGTTTATCGCGTGGTGAAGGTCCCATTGTGTTGGTGTTAGCACCCACTAGAGAATTAGCTGTTCAAATTCAGCAAGAGGCTACTAAATTCGGACTGCATGCTAATATTAGAAGTACTTGCGTTTATGGTGGGGCTCCAAAAGGGCCTCAAATTCGTGATCTCAAAAATGGTGTTGAGATTGTTATTGCTACACCTGGTCGGCTCATAGATATGCTGGAAGCTGGCCACACAAACTTGCGGCGAGTGACTTACCTTGTTTTAGATGAAGCAGATAGAATGCTGGACATGGGATTTGAGCCTCAAATAAGGACAATCGTTAGCCAAATCCGACCGGATAGGCAGACATTATATTGGAGTGCCACATGGCCAAGGGAGGTTGAGAAATTGGCTAGACAATTTTTGCGTAATGCATATAAGGTCATTATTGGTTCCCCAGATCTTAAAGCTAACCAGTCTATAAACCAAGTTGTTGAAGTTTTGCCAGAGGCTGAGAAATATAGAAGGTTAATAAAATTGCTCGGAGAAGTAATGGATGGTAGTCGTATTCTGATTTTTGTGGAAACAAAAAAGGGCTGTGATAAAGTAACGAGGCAATTGAGAATGGATGGATGGCCAGCTCTATCCATTCACGGTGACAAAAAGCAGGCTGAAAGGGACTTGGTTTTGTCAGAATTTAAGAGTGGGAGAAACCCAATAATGACAGCCACGGATGTGGCTGCAAGAGGGCTTGATGTGAAAGATATAAAATGTGTGATCAACTTTGATTTCCCATCAAGCCTCGAGGACTACGTCCACAGGATAGGCCGAACGGGTCGTGCTGGTGCAAAGGGAACTGCATTCACATTCTTTACTCATGAGAATGCAAAACACGCTAGAGATCTTATAAAGATACTGCGAGAAGCAGGGCAGATTGTCACCCCTGCGTTGTCTGCTTTAGCCTCATCTAGTGGCTTTGGAGGTTCTGGTGCTAAATTTCGCTCCCAAGGACACAGAGGTGGGTTTGGTAATCGAACAATGGTTTCGGGATCAAATGCGATCCCTCTTGGTTTGACGACCAGACCACGCTAG

Protein sequence

MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGALPNAGGVNGLPRFQPPAGSFNIGRGGGGGFGSSGGGRRTFDAERGGRRIGGSIGFGGGRGGGTGFDGRGGGRGGGRGGGGSSRGDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRDLVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINFDFPSSLEDYVHRIGRTGRAGAKGTAFTFFTHENAKHARDLIKILREAGQIVTPALSALASSSGFGGSGAKFRSQGHRGGFGNRTMVSGSNAIPLGLTTRPR

Homology

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BLAST of CsaV3_1G001160 vs. NCBI nr
Match: XP_004138092.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucumis sativus])

HSP 1 Score: 1042.0 bits (2693), Expect = 8.4e-301
Identity = 622/622 (100.00%), Postives = 622/622 (100.00%), Query Frame = 0


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60

Query: 61  PNAGGVNGLPRFQPXXXXXXXXXXXXXXXXXXXXXXRTFDAERGGXXXXXXXXXXXXXXX 120
           PNAGGVNGLPRFQPXXXXXXXXXXXXXXXXXXXXXXRTFDAERGGXXXXXXXXXXXXXXX
Sbjct: 61  PNAGGVNGLPRFQPXXXXXXXXXXXXXXXXXXXXXXRTFDAERGGXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           XXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180

Query: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD
Sbjct: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240

Query: 241 LVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300
           LVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH
Sbjct: 241 LVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM
Sbjct: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINFDFPSSLEDYVHRXXXXXXX 540
           KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINFDFPSSLEDYVHRXXXXXXX
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINFDFPSSLEDYVHRXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXIKILREAGQIVTPALSALASSSGFGGSGAKFRSQGHRGG 600
           XXXXXXXXXXXXXXXXXXXXXIKILREAGQIVTPALSALASSSGFGGSGAKFRSQGHRGG
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXIKILREAGQIVTPALSALASSSGFGGSGAKFRSQGHRGG 600

Query: 601 FGNRTMVSGSNAIPLGLTTRPR 623
           FGNRTMVSGSNAIPLGLTTRPR
Sbjct: 601 FGNRTMVSGSNAIPLGLTTRPR 622

[Close]

BLAST of CsaV3_1G001160 vs. NCBI nr
Match: XP_008464517.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucumis melo])

HSP 1 Score: 1006.1 bits (2600), Expect = 5.1e-290
Identity = 601/622 (96.62%), Postives = 607/622 (97.59%), Query Frame = 0


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60

Query: 61  PNAGGVNGLPRFQPXXXXXXXXXXXXXXXXXXXXXXRTFDAERGGXXXXXXXXXXXXXXX 120
            NAGGVNGLPRFQP XXXXXXXXXXXXXXXXXXXXX  FD+ERG XXXXXXXXXXXXXXX
Sbjct: 61  ANAGGVNGLPRFQPPXXXXXXXXXXXXXXXXXXXXXXXFDSERGXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           XXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVR MTESEV
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVRVMTESEV 180

Query: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           KIYRERRDIRVEGYDVP+PIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD
Sbjct: 181 KIYRERRDIRVEGYDVPKPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240

Query: 241 LVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300
           L+GIAETGSGKTLAYLLPA+IHISAQPRLS GEGPIVLVLAPTRELAVQIQQEATKFGL 
Sbjct: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM
Sbjct: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGS DLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSSDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLL EVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINFDFPSSLEDYVHRXXXXXXX 540
           KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVIN+DFPSSLEDYVHRXXXXXXX
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXIKILREAGQIVTPALSALASSSGFGGSGAKFRSQGHRGG 600
           XXXXXXXXXXXXXXXXXXX  IKILREAGQIVTPALS LASSSGFGGSGAKFR QGHRGG
Sbjct: 541 XXXXXXXXXXXXXXXXXXXDLIKILREAGQIVTPALSTLASSSGFGGSGAKFRPQGHRGG 600

Query: 601 FGNRTMVSGSNAIPLGLTTRPR 623
           FG+RTMVSGSNAIPLGL TRPR
Sbjct: 601 FGHRTMVSGSNAIPLGLATRPR 622

[Close]

BLAST of CsaV3_1G001160 vs. NCBI nr
Match: XP_022987231.1 (DEAD-box ATP-dependent RNA helicase 20-like [Cucurbita maxima])

HSP 1 Score: 936.0 bits (2418), Expect = 6.5e-269
Identity = 544/625 (87.04%), Postives = 564/625 (90.24%), Query Frame = 0


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           MNPYDHRYADPNSYR+RRSDLVG QPAAPPP+AGRES+YKG+ PPP PYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRERRSDLVGPQPAAPPPMAGRESMYKGFHPPPVPYYGRERGGGGAL 60

Query: 61  PNAGGVNGLPRFQPXXXXXXXXXXXXXXXXXXXXXXRTFDAERGG---XXXXXXXXXXXX 120
           PNAGG NG PRFQP                         D   GG   XXXXXXXXXXXX
Sbjct: 61  PNAGGFNGFPRFQPPAGPFNIGRSGN-------------DFGSGGXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTE 180
           XXXXXXXXXXXXXXXXXXX       DLDNIVLPSQNFG+LVPFEKNFYTECPSVRAMTE
Sbjct: 121 XXXXXXXXXXXXXXXXXXXRGGSSRGDLDNIVLPSQNFGDLVPFEKNFYTECPSVRAMTE 180

Query: 181 SEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALK 240
           SEVK+YRERRDIRVEGYDVP+PIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMA+K
Sbjct: 181 SEVKMYRERRDIRVEGYDVPKPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMAMK 240

Query: 241 GRDLVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKF 300
           GRDL+GIAETGSGKTLAYLLPA+IHISAQPRL  G+GPIVLVLAPTRELAVQIQQE TKF
Sbjct: 241 GRDLIGIAETGSGKTLAYLLPALIHISAQPRLVHGQGPIVLVLAPTRELAVQIQQEVTKF 300

Query: 301 GLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEA 360
           GL ANIRSTC+YGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNL+RVTYLVLDEA
Sbjct: 301 GLRANIRSTCIYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLQRVTYLVLDEA 360

Query: 361 DRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKAN 420
           DRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFL NAYKVIIGS DLKAN
Sbjct: 361 DRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLHNAYKVIIGSSDLKAN 420

Query: 421 QSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIH 480
           QSINQVVEVLPEAEKYRRLIKLL EVMDGSR+LIFVETKKGCDKVTRQLRMDGWPALSIH
Sbjct: 421 QSINQVVEVLPEAEKYRRLIKLLVEVMDGSRVLIFVETKKGCDKVTRQLRMDGWPALSIH 480

Query: 481 GDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINFDFPSSLEDYVHRXXXX 540
           GDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVIN+DFPSSLEDYVHRXXXX
Sbjct: 481 GDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXIKILREAGQIVTPALSALASSSGFGGSGAKFRSQGH 600
           XXXXXXXXXXXXXXXXXXXXXXXX   LREAGQIV+PALSALA+SS  GGS +K+R QGH
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXLREAGQIVSPALSALATSSATGGSSSKYRPQGH 600

Query: 601 RGGFGNRTMVSGSNAIPLGLTTRPR 623
           RG  GNRTMVSG NAIP+GL TRPR
Sbjct: 601 RGFGGNRTMVSGPNAIPIGL-TRPR 611

[Close]

BLAST of CsaV3_1G001160 vs. NCBI nr
Match: XP_022965035.1 (DEAD-box ATP-dependent RNA helicase 20-like [Cucurbita moschata])

HSP 1 Score: 933.3 bits (2411), Expect = 4.2e-268
Identity = 542/622 (87.14%), Postives = 559/622 (89.87%), Query Frame = 0


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           MNPYDHRYADPNSYR+RRSDLVG QPAAPPPIAGRES+YKG+ PPP PYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRERRSDLVGPQPAAPPPIAGRESMYKGFHPPPVPYYGRERGGGGAL 60

Query: 61  PNAGGVNGLPRFQPXXXXXXXXXXXXXXXXXXXXXXRTFDAERGGXXXXXXXXXXXXXXX 120
           PNAGG NG PRFQP                               XXXXXXXXXXXXXXX
Sbjct: 61  PNAGGFNGFPRFQPPAGPFNIGRSGNDFG----------SGXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           XXXXXXXXXXXXXXXX       DLDNIVLPSQNFG+LVPFEKNFYTECPSVRAMTESEV
Sbjct: 121 XXXXXXXXXXXXXXXXRGGSSRGDLDNIVLPSQNFGDLVPFEKNFYTECPSVRAMTESEV 180

Query: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           K+YRERRDIRVEGYDVP+PIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMA+KGRD
Sbjct: 181 KMYRERRDIRVEGYDVPKPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMAMKGRD 240

Query: 241 LVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300
           L+GIAETGSGKTLAYLLPA+IHISAQPRL  G+GPIVLVLAPTRELAVQIQQE TKFGL 
Sbjct: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLVHGQGPIVLVLAPTRELAVQIQQEVTKFGLR 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTC+YGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNL+RVTYLVLDEADRM
Sbjct: 301 ANIRSTCIYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLQRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFL NAYKVIIGS DLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLHNAYKVIIGSSDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLL EVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINFDFPSSLEDYVHRXXXXXXX 540
           KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVIN+DFPSSLEDYVHRXXXXXXX
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXIKILREAGQIVTPALSALASSSGFGGSGAKFRSQGHRGG 600
           XXXXXXXXXXXXXXXXXXXXX      AGQIV+PALSALASSSG GGS +K+R QGHRG 
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXAGQIVSPALSALASSSGTGGSSSKYRPQGHRGF 600

Query: 601 FGNRTMVSGSNAIPLGLTTRPR 623
            GNRTMVSG NAIP+GL TRPR
Sbjct: 601 GGNRTMVSGPNAIPIGL-TRPR 611

[Close]

BLAST of CsaV3_1G001160 vs. NCBI nr
Match: XP_023516950.1 (DEAD-box ATP-dependent RNA helicase 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 932.6 bits (2409), Expect = 7.2e-268
Identity = 539/622 (86.66%), Postives = 558/622 (89.71%), Query Frame = 0


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           MNPYDHRYADPNSYR+RRSDLVG QPAAPPP+AGRES+YKG+ PPP PYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRERRSDLVGPQPAAPPPMAGRESMYKGFHPPPVPYYGRERGGGGAL 60

Query: 61  PNAGGVNGLPRFQPXXXXXXXXXXXXXXXXXXXXXXRTFDAERGGXXXXXXXXXXXXXXX 120
           PNAGG NG PRFQP                               XXXXXXXXXXXXXXX
Sbjct: 61  PNAGGFNGFPRFQPPAGPFNIGRSGNDFG----------SGXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           XXXXXXXXXXXXXX         DLDNIVLPSQNFG+LVPFEKNFYTECPSVRAMTESEV
Sbjct: 121 XXXXXXXXXXXXXXAGRGGSSRGDLDNIVLPSQNFGDLVPFEKNFYTECPSVRAMTESEV 180

Query: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           K+YRERRDIRVEGYDVP+PIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMA+KGRD
Sbjct: 181 KMYRERRDIRVEGYDVPKPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMAMKGRD 240

Query: 241 LVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300
           L+GIAETGSGKTLAYLLPA+IHISAQPRL  G+GPIVLVLAPTRELAVQIQQE TKFGL 
Sbjct: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLVHGQGPIVLVLAPTRELAVQIQQEVTKFGLR 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTC+YGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNL+RVTYLVLDEADRM
Sbjct: 301 ANIRSTCIYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLQRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFL +AYKVIIGS DLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLHDAYKVIIGSSDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLL EVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINFDFPSSLEDYVHRXXXXXXX 540
           KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVIN+DFPSSLEDYVHRXXXXXXX
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXIKILREAGQIVTPALSALASSSGFGGSGAKFRSQGHRGG 600
           XXXXXXXXXXXXXXXXXXXXX    REAGQIV+PALSALASSS  GGS +K+R QGHRG 
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXREAGQIVSPALSALASSSATGGSSSKYRPQGHRGF 600

Query: 601 FGNRTMVSGSNAIPLGLTTRPR 623
            GNRTMVSG NAIP+GL TRPR
Sbjct: 601 GGNRTMVSGPNAIPIGL-TRPR 611

[Close]

BLAST of CsaV3_1G001160 vs. TAIR10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 677.2 bits (1746), Expect = 9.8e-195
Identity = 384/593 (64.76%), Postives = 436/593 (73.52%), Query Frame = 0


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGA- 60
           M+ YD R+ADPNSYR R    VG                +   P  APY  R  GGGG  
Sbjct: 1   MSSYDRRFADPNSYRQRSGAPVGSS--------------QPMDPSAAPYNPRYTGGGGGY 60

Query: 61  ------LPNAGGVNGLPRFQPXXXXXXXXXXXXXXXXXXXXXXRTFDAERGGXXXXXXXX 120
                   +  G N  P FQP                        F   RG         
Sbjct: 61  GPSPVMAGDNSGYNRYPSFQPPSGG--------------------FSVGRG--------- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVR 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX  +LD++ LP QNFGNLV FEKNFY E P+V+
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKRELDSVSLPKQNFGNLVHFEKNFYVESPTVQ 180

Query: 181 AMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWP 240
           AMTE +V +YR  RDI VEG DVP+P++ FQ+ANFP   L+ IAKLGF EPTPIQAQGWP
Sbjct: 181 AMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWP 240

Query: 241 MALKGRDLVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQE 300
           MALKGRDL+GIAETGSGKTLAYLLPA++H+SAQPRL + +GPIVL+LAPTRELAVQIQ+E
Sbjct: 241 MALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEE 300

Query: 301 ATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLV 360
           + KFGL + +RSTC+YGGAPKGPQIRDL+ GVEIVIATPGRLIDMLE  HTNL+RVTYLV
Sbjct: 301 SRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLV 360

Query: 361 LDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPD 420
           LDEADRMLDMGFEPQIR IVSQIRPDRQTL WSATWPREVE LARQFLR+ YK IIGS D
Sbjct: 361 LDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTD 420

Query: 421 LKANQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPA 480
           LKANQSINQV+E++P  EKY RL+ LL ++MDGS+ILIFVETK+GCD+VTRQLRMDGWPA
Sbjct: 421 LKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPA 480

Query: 481 LSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINFDFPSSLEDYVHR 540
           L+IHGDK Q+ERD VL+EFKSGR+PIMTATDVAARGLDVKDIKCV+N+DFP++LEDY+HR
Sbjct: 481 LAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHR 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXIKILREAGQIVTPALSALASSSGFG 587
                                       +KIL+EAGQ+V P LSAL  SSG G
Sbjct: 541 IGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTLSALVRSSGSG 550

[Close]

BLAST of CsaV3_1G001160 vs. TAIR10
Match: AT1G55150.1 (DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 615.5 bits (1586), Expect = 3.5e-176
Identity = 312/449 (69.49%), Postives = 381/449 (84.86%), Query Frame = 0


Query: 158 LVPFEKNFYTECPSVRAMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIA 217
           L PFEKNFY E P+V AMT++EV+ YR+ R+I VEG D+P+P++SF++  FP Y L+ + 
Sbjct: 56  LTPFEKNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVK 115

Query: 218 KLGFVEPTPIQAQGWPMALKGRDLVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIV 277
           K GF EPTPIQ+QGWPMA+KGRDL+GIAETGSGKTL+YLLPA++H++AQP L+ G+GPIV
Sbjct: 116 KAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIV 175

Query: 278 LVLAPTRELAVQIQQEATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLID 337
           LVLAPTRELAVQIQQEA+KFG  + I++TC+YGG PKGPQ+RDL+ GVEIVIATPGRLID
Sbjct: 176 LVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLID 235

Query: 338 MLEAGHTNLRRVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLA 397
           M+E+ +TNLRRVTYLVLDEADRMLDMGF+PQIR IVS IRPDRQTLYWSATWP+EVE+L+
Sbjct: 236 MMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLS 295

Query: 398 RQFLRNAYKVIIGSPDLKANQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKK 457
           ++FL N YKVIIGS DLKAN++I Q+V+V+ E++KY +L+KLL ++MDGSRIL+F++TKK
Sbjct: 296 KKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKK 355

Query: 458 GCDKVTRQLRMDGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKC 517
           GCD++TRQLRMDGWPALSIHGDK QAERD VLSEF+SG++PIMTATDVAARGLDVKD+K 
Sbjct: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKY 415

Query: 518 VINFDFPSSLEDYVHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKILREAGQIVTPALS 577
           VIN+DFP SLEDYVHR  XXXXXXXXXXXXXXXX            IL+EAGQ V+P L+
Sbjct: 416 VINYDFPGSLEDYVHRIGXXXXXXXXXXXXXXXXVANARFAKELTNILQEAGQKVSPELA 475

Query: 578 ALASSS-----GFGGSGAKFRSQGHRGGF 602
           ++  S+     G GG    FR +G R G+
Sbjct: 476 SMGRSTAPPPPGLGG----FRDRGSRRGW 500

[Close]

BLAST of CsaV3_1G001160 vs. TAIR10
Match: AT3G01540.2 (DEAD box RNA helicase 1)

HSP 1 Score: 406.8 bits (1044), Expect = 2.5e-113
Identity = 213/418 (50.96%), Postives = 274/418 (65.55%), Query Frame = 0


Query: 170 PSVRAMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQA 229
           PS    +E   + Y  R +I V G  VP P+ SF+   FP   L  +   GF  PTPIQA
Sbjct: 127 PSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQA 186

Query: 230 QGWPMALKGRDLVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQ 289
           Q WP+A++GRD+V IA+TGSGKTL YL+P  +H+      SR  GP +LVL+PTRELA Q
Sbjct: 187 QSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSR-MGPTILVLSPTRELATQ 246

Query: 290 IQQEATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRV 349
           IQ+EA KFG  + I  TC+YGGAPKGPQ+RDL+ G +IV+ATPGRL D+LE    +LR++
Sbjct: 247 IQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQI 306

Query: 350 TYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVII 409
           +YLVLDEADRMLDMGFEPQIR IV +I   RQTL ++ATWP+ V K+A   L N  +V I
Sbjct: 307 SYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNI 366

Query: 410 GSPD-LKANQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRM 469
           G+ D L AN+SI Q +EV+   EK RRL ++L     GS+++IF  TK+ CD++TR L  
Sbjct: 367 GNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTR 426

Query: 470 DGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINFDFPSSLE 529
             + A +IHGDK Q ERD VL++F+SGR P++ ATDVAARGLDVKDI+ V+N+DFP+ +E
Sbjct: 427 Q-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVE 486

Query: 530 DYVHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKILREAGQIVTPALSALASSSGFG 587
           DYVHR                            IKIL  A Q V P +  +A+  G G
Sbjct: 487 DYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGGGG 542

[Close]

BLAST of CsaV3_1G001160 vs. TAIR10
Match: AT3G06480.1 (DEAD box RNA helicase family protein)

HSP 1 Score: 383.3 bits (983), Expect = 2.9e-106
Identity = 211/423 (49.88%), Postives = 280/423 (66.19%), Query Frame = 0


Query: 178 SEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALK 237
           S V+IYR++ ++   G ++P P  +F+ +  P   L  +   GF  PTPIQAQ WP+AL+
Sbjct: 412 SPVEIYRKQHEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQ 471

Query: 238 GRDLVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKF 297
            RD+V IA+TGSGKTL YL+PA I +      SR  GP VL+LAPTRELA QIQ EA +F
Sbjct: 472 SRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSR-NGPTVLILAPTRELATQIQDEALRF 531

Query: 298 GLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEA 357
           G  + I  TC+YGGAPKGPQ+++L+ G +IV+ATPGRL D+LE    + ++V+ LVLDEA
Sbjct: 532 GRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEA 591

Query: 358 DRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPD-LKA 417
           DRMLDMGFEPQIR IV++I P RQTL ++ATWP+EV K+A   L N  +V IG  D L A
Sbjct: 592 DRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAA 651

Query: 418 NQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSI 477
           N++I Q VEV+P+ EK RRL ++L     GS+++IF  TK+ CD + R +    + A+ I
Sbjct: 652 NKAITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVGRH-FGAVVI 711

Query: 478 HGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINFDFPSSLEDYVHRXXX 537
           HGDK Q ERD VL++F+SG++ ++ ATDVAARGLD+KDI+ VIN+DFP+ +EDYVHR   
Sbjct: 712 HGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGR 771

Query: 538 XXXXXXXXXXXXXXXXXXXXXXXXXIKILREAGQIVTPALSALASSSGFGGSGAKFRSQG 597
             XXX                    IK+L  A Q V P +  +A   G G  G  + SQ 
Sbjct: 772 TGXXXATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQVRDIAMRGG-GXXGPGY-SQD 830

Query: 598 HRG 600
            RG
Sbjct: 832 RRG 830

[Close]

BLAST of CsaV3_1G001160 vs. TAIR10
Match: AT1G20920.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 375.6 bits (963), Expect = 6.1e-104
Identity = 207/450 (46.00%), Postives = 285/450 (63.33%), Query Frame = 0


Query: 160 PFEKNFYTECPSVRAMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKL 219
           PF KNFY E   +  MT+ EV  YR+  +++V G DVPRPI+ + +    +  LD + KL
Sbjct: 488 PFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKL 547

Query: 220 GFVEPTPIQAQGWPMALKGRDLVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLV 279
            + +P PIQ Q  P+ + GRD +G+A+TGSGKTL ++LP + HI  QP +  G+GPI LV
Sbjct: 548 NYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLV 607

Query: 280 LAPTRELAVQIQQEATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDML 339
           +APTREL  QI  +  KF     IR   VYGG+    QI +LK G EIV+ TPGR+ID+L
Sbjct: 608 MAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDIL 667

Query: 340 ---EAGHTNLRRVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKL 399
                  TNLRRVT+LV+DEADRM DMGFEPQI  I+  IRP+RQT+ +SAT+PR+VE L
Sbjct: 668 CTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETL 727

Query: 400 ARQFLRNAYKVIIGSPDLKANQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETK 459
           AR+ L    ++ +G   +  N+ I Q+VEV PE++++ RL++LLGE  +  +IL+FV+++
Sbjct: 728 ARKVLNKPVEIQVGGRSV-VNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQ 787

Query: 460 KGCDKVTRQLRMDGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIK 519
           + CD + R +    +P LS+HG K Q +R+  +S+FK+    ++ AT VAARGLDVK+++
Sbjct: 788 EKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELE 847

Query: 520 CVINFDFPSSLEDYVHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKILREAGQIVTPAL 579
            V+NFD P+  EDYVH XXXXXXXXXXX                 +K L  + Q V   L
Sbjct: 848 LVVNFDAPNHYEDYVHXXXXXXXXXXXXCAVTFISEDDAKYAPDLVKALELSEQPVPDDL 907

Query: 580 SALAS--------------SSGFGGSGAKF 593
            ALA                +G+GGSG KF
Sbjct: 908 KALADGFMVKVKQGIEQAHGTGYGGSGFKF 936

[Close]

BLAST of CsaV3_1G001160 vs. Swiss-Prot
Match: sp|Q5N7W4|RH30_ORYSJ (DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0911100 PE=2 SV=2)

HSP 1 Score: 691.0 bits (1782), Expect = 1.2e-197
Identity = 358/471 (76.01%), Postives = 411/471 (87.26%), Query Frame = 0


Query: 145 LDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEVKIYRERRDIRVEGYDVPRPIRSFQ 204
           LD++ LP  +F +L+PFEKNFY ECP+V+AM++ +V  YR +RDI VEG+DVP+P+R FQ
Sbjct: 195 LDSLSLPKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQ 254

Query: 205 EANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRDLVGIAETGSGKTLAYLLPAVIHIS 264
           EANFP YC+  IAK GFVEPTPIQ+QGWPMALKGRD++GIA+TGSGKTL+YLLP ++H+ 
Sbjct: 255 EANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVG 314

Query: 265 AQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLHANIRSTCVYGGAPKGPQIRDLKNG 324
           AQPRL +G+GPIVL+LAPTRELAVQIQQE+ KFG ++  RSTC+YGGAPKGPQIRDL+ G
Sbjct: 315 AQPRLEQGDGPIVLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRG 374

Query: 325 VEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLY 384
           VEIVIATPGRLIDMLE GHTNLRRVTYLVLDEADRMLDMGFEPQIR IV+QIRPDRQTLY
Sbjct: 375 VEIVIATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLY 434

Query: 385 WSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSINQVVEVLPEAEKYRRLIKLLGEVM 444
           WSATWPREVE LARQFL+N YKVIIGSPDLKAN SI Q++EV+ E EKY RL KLL ++M
Sbjct: 435 WSATWPREVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDLM 494

Query: 445 DGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATD 504
           DGSRILIF +TKK CDKVTRQLRMDGWPALSIHGDK QAERD VL+EFKSG++PIM ATD
Sbjct: 495 DGSRILIFFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATD 554

Query: 505 VAARGLDVKDIKCVINFDFPSSLEDYVHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKI 564
           VAARGLDVKDIKCVINFDFP++LEDY+HRXXXXXXXXXXXXXXXXXXXX        +KI
Sbjct: 555 VAARGLDVKDIKCVINFDFPTTLEDYIHRXXXXXXXXXXXXXXXXXXXXNAKFSRNLVKI 614

Query: 565 LREAGQIVTPALSALASSSGFGGSGAKFRSQGHRGGFGNRTMVSGSNAIPL 616
           LREAGQ+V PAL ++A S+   G G  FRS+G RGGFGNR   SGSN+IP+
Sbjct: 615 LREAGQVVNPALESMAKSASSMG-GGNFRSRG-RGGFGNR---SGSNSIPI 660

[Close]

BLAST of CsaV3_1G001160 vs. Swiss-Prot
Match: sp|Q8W4R3|RH30_ARATH (DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana OX=3702 GN=RH30 PE=1 SV=2)

HSP 1 Score: 677.2 bits (1746), Expect = 1.8e-193
Identity = 384/593 (64.76%), Postives = 436/593 (73.52%), Query Frame = 0


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGA- 60
           M+ YD R+ADPNSYR R    VG                +   P  APY  R  GGGG  
Sbjct: 1   MSSYDRRFADPNSYRQRSGAPVGSS--------------QPMDPSAAPYNPRYTGGGGGY 60

Query: 61  ------LPNAGGVNGLPRFQPXXXXXXXXXXXXXXXXXXXXXXRTFDAERGGXXXXXXXX 120
                   +  G N  P FQP                        F   RG         
Sbjct: 61  GPSPVMAGDNSGYNRYPSFQPPSGG--------------------FSVGRG--------- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVR 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX  +LD++ LP QNFGNLV FEKNFY E P+V+
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKRELDSVSLPKQNFGNLVHFEKNFYVESPTVQ 180

Query: 181 AMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWP 240
           AMTE +V +YR  RDI VEG DVP+P++ FQ+ANFP   L+ IAKLGF EPTPIQAQGWP
Sbjct: 181 AMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWP 240

Query: 241 MALKGRDLVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQE 300
           MALKGRDL+GIAETGSGKTLAYLLPA++H+SAQPRL + +GPIVL+LAPTRELAVQIQ+E
Sbjct: 241 MALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEE 300

Query: 301 ATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLV 360
           + KFGL + +RSTC+YGGAPKGPQIRDL+ GVEIVIATPGRLIDMLE  HTNL+RVTYLV
Sbjct: 301 SRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLV 360

Query: 361 LDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPD 420
           LDEADRMLDMGFEPQIR IVSQIRPDRQTL WSATWPREVE LARQFLR+ YK IIGS D
Sbjct: 361 LDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTD 420

Query: 421 LKANQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPA 480
           LKANQSINQV+E++P  EKY RL+ LL ++MDGS+ILIFVETK+GCD+VTRQLRMDGWPA
Sbjct: 421 LKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPA 480

Query: 481 LSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINFDFPSSLEDYVHR 540
           L+IHGDK Q+ERD VL+EFKSGR+PIMTATDVAARGLDVKDIKCV+N+DFP++LEDY+HR
Sbjct: 481 LAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHR 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXIKILREAGQIVTPALSALASSSGFG 587
                                       +KIL+EAGQ+V P LSAL  SSG G
Sbjct: 541 IGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTLSALVRSSGSG 550

[Close]

BLAST of CsaV3_1G001160 vs. Swiss-Prot
Match: sp|Q5QMN3|RH20_ORYSJ (DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0197200 PE=3 SV=2)

HSP 1 Score: 620.2 bits (1598), Expect = 2.6e-176
Identity = 324/440 (73.64%), Postives = 375/440 (85.23%), Query Frame = 0


Query: 161 FEKNFYTECPSVRAMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLG 220
           FEKNFY E PSV  MTE EV+ YR RR+I VEG DVP+P+R F++  FP Y L  I K G
Sbjct: 51  FEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAG 110

Query: 221 FVEPTPIQAQGWPMALKGRDLVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVL 280
           FVEPTPIQ+QGWPMAL+GRDL+GIAETGSGKTLAYLLPA++H++AQP L+ G+GPIVLVL
Sbjct: 111 FVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVL 170

Query: 281 APTRELAVQIQQEATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLE 340
           APTRELAVQIQQEATKFG  + I+STC+YGG PKGPQ+RDL+ GVEIVIATPGRLIDM+E
Sbjct: 171 APTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIE 230

Query: 341 AGHTNLRRVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQF 400
           + HTNLRRVTYLVLDEADRMLDMGFEPQI+ IVSQIRPDRQTLYWSATWP+EVE+LAR F
Sbjct: 231 SHHTNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNF 290

Query: 401 LRNAYKVIIGSPDLKANQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCD 460
           L + YKVIIGS +LKAN +I+Q VE+L E++KY +L+ LL ++MDGSRILIF++TKKGCD
Sbjct: 291 LFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLEDIMDGSRILIFMDTKKGCD 350

Query: 461 KVTRQLRMDGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVIN 520
           ++TRQLRMDGWPALSIHGDK QAERD VLSEFKSG++PIMTATDVAARGLDVKD+K VIN
Sbjct: 351 QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVIN 410

Query: 521 FDFPSSLEDYVHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKILREAGQIVTPALSALA 580
           +DFP SLEDYVHR XXXXXXXXXXXXXXXXXXXX       I IL EAGQ V+P L+ + 
Sbjct: 411 YDFPGSLEDYVHRIXXXXXXXXXXXXXXXXXXXXARFAKDLINILEEAGQKVSPELANMG 470

Query: 581 SSSGFGGSGAKFRSQGHRGG 601
             +    SG + R +G+ GG
Sbjct: 471 RGAPPPSSGHRDRYRGYGGG 490

[Close]

BLAST of CsaV3_1G001160 vs. Swiss-Prot
Match: sp|Q9C718|RH20_ARATH (DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana OX=3702 GN=RH20 PE=2 SV=1)

HSP 1 Score: 615.5 bits (1586), Expect = 6.3e-175
Identity = 312/449 (69.49%), Postives = 381/449 (84.86%), Query Frame = 0


Query: 158 LVPFEKNFYTECPSVRAMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIA 217
           L PFEKNFY E P+V AMT++EV+ YR+ R+I VEG D+P+P++SF++  FP Y L+ + 
Sbjct: 56  LTPFEKNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVK 115

Query: 218 KLGFVEPTPIQAQGWPMALKGRDLVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIV 277
           K GF EPTPIQ+QGWPMA+KGRDL+GIAETGSGKTL+YLLPA++H++AQP L+ G+GPIV
Sbjct: 116 KAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIV 175

Query: 278 LVLAPTRELAVQIQQEATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLID 337
           LVLAPTRELAVQIQQEA+KFG  + I++TC+YGG PKGPQ+RDL+ GVEIVIATPGRLID
Sbjct: 176 LVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLID 235

Query: 338 MLEAGHTNLRRVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLA 397
           M+E+ +TNLRRVTYLVLDEADRMLDMGF+PQIR IVS IRPDRQTLYWSATWP+EVE+L+
Sbjct: 236 MMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLS 295

Query: 398 RQFLRNAYKVIIGSPDLKANQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKK 457
           ++FL N YKVIIGS DLKAN++I Q+V+V+ E++KY +L+KLL ++MDGSRIL+F++TKK
Sbjct: 296 KKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKK 355

Query: 458 GCDKVTRQLRMDGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKC 517
           GCD++TRQLRMDGWPALSIHGDK QAERD VLSEF+SG++PIMTATDVAARGLDVKD+K 
Sbjct: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKY 415

Query: 518 VINFDFPSSLEDYVHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKILREAGQIVTPALS 577
           VIN+DFP SLEDYVHR  XXXXXXXXXXXXXXXX            IL+EAGQ V+P L+
Sbjct: 416 VINYDFPGSLEDYVHRIGXXXXXXXXXXXXXXXXVANARFAKELTNILQEAGQKVSPELA 475

Query: 578 ALASSS-----GFGGSGAKFRSQGHRGGF 602
           ++  S+     G GG    FR +G R G+
Sbjct: 476 SMGRSTAPPPPGLGG----FRDRGSRRGW 500

[Close]

BLAST of CsaV3_1G001160 vs. Swiss-Prot
Match: sp|G0SFM2|DBP2_CHATD (ATP-dependent RNA helicase DBP2 OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) OX=759272 GN=DBP2 PE=3 SV=2)

HSP 1 Score: 522.7 bits (1345), Expect = 5.6e-147
Identity = 277/442 (62.67%), Postives = 334/442 (75.57%), Query Frame = 0


Query: 151 PSQNFGNLVPFEKNFYTECPSVRAMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPA 210
           P+ +   L  FEK+FY E P+V A + +EV+ +R   +I V G DVP+P+ +F EA FP 
Sbjct: 79  PNWDLATLPKFEKSFYKEHPNVTARSMAEVEKFRRDHNITVSGRDVPKPVETFDEAGFPR 138

Query: 211 YCLDVIAKLGFVEPTPIQAQGWPMALKGRDLVGIAETGSGKTLAYLLPAVIHISAQPRLS 270
           Y +D +   GF  PT IQAQGWPMAL GRD+VGIAETGSGKTL Y LPA++HI+AQP L+
Sbjct: 139 YVMDEVKAQGFPAPTAIQAQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLA 198

Query: 271 RGEGPIVLVLAPTRELAVQIQQEATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIA 330
            G+GPIVLVLAPTRELAVQIQQE  KFG  + IR+TC+YGG PKGPQIRDL+ GVE+ IA
Sbjct: 199 PGDGPIVLVLAPTRELAVQIQQEINKFGKSSRIRNTCIYGGVPKGPQIRDLQRGVEVCIA 258

Query: 331 TPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWP 390
           TPGRLIDMLE+G TNLRRVTYLVLDEADRMLDMGFEPQIR I+SQIRPDRQTL WSATWP
Sbjct: 259 TPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMWSATWP 318

Query: 391 REVEKLARQFLRNAYKVIIGSPDLKANQSINQVVEVLPEAEKYRRLIKLLGEVMDG---- 450
           +EV  LA  FL +  +V IGS DL AN  I Q+VEV+ E+EK  RLIK L ++MD     
Sbjct: 319 KEVRNLAADFLTDFIQVNIGSLDLAANHRITQIVEVISESEKRDRLIKHLEKIMDSRDTQ 378

Query: 451 SRILIFVETKKGCDKVTRQLRMDGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVA 510
           ++ LIFV TK+  D +TR LR DGWPALSIHGDK+Q ERD VL +FK+G++PIM ATDVA
Sbjct: 379 NKCLIFVGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVA 438

Query: 511 ARGLDVKDIKCVINFDFPSSLEDYVHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKILR 570
           +RG+DV++I  VIN+D+P++ EDY+HR  XXXXXXXXXXXXX             + +L+
Sbjct: 439 SRGIDVRNITHVINYDYPNNSEDYIHRIGXXXXXXXXXXXXXFFTTENAKQARDLVSVLQ 498

Query: 571 EAGQIVTPALSALASSSGFGGS 589
           EA Q V P L  +A  SG GGS
Sbjct: 499 EAKQHVDPRLLEMARYSGGGGS 520

[Close]

BLAST of CsaV3_1G001160 vs. TrEMBL
Match: tr|A0A1S3CLM7|A0A1S3CLM7_CUCME (DEAD-box ATP-dependent RNA helicase 20 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502377 PE=3 SV=1)

HSP 1 Score: 1006.1 bits (2600), Expect = 3.4e-290
Identity = 601/622 (96.62%), Postives = 607/622 (97.59%), Query Frame = 0


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60

Query: 61  PNAGGVNGLPRFQPXXXXXXXXXXXXXXXXXXXXXXRTFDAERGGXXXXXXXXXXXXXXX 120
            NAGGVNGLPRFQP XXXXXXXXXXXXXXXXXXXXX  FD+ERG XXXXXXXXXXXXXXX
Sbjct: 61  ANAGGVNGLPRFQPPXXXXXXXXXXXXXXXXXXXXXXXFDSERGXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           XXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVR MTESEV
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVRVMTESEV 180

Query: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           KIYRERRDIRVEGYDVP+PIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD
Sbjct: 181 KIYRERRDIRVEGYDVPKPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240

Query: 241 LVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300
           L+GIAETGSGKTLAYLLPA+IHISAQPRLS GEGPIVLVLAPTRELAVQIQQEATKFGL 
Sbjct: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM
Sbjct: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGS DLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSSDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLL EVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINFDFPSSLEDYVHRXXXXXXX 540
           KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVIN+DFPSSLEDYVHRXXXXXXX
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXIKILREAGQIVTPALSALASSSGFGGSGAKFRSQGHRGG 600
           XXXXXXXXXXXXXXXXXXX  IKILREAGQIVTPALS LASSSGFGGSGAKFR QGHRGG
Sbjct: 541 XXXXXXXXXXXXXXXXXXXDLIKILREAGQIVTPALSTLASSSGFGGSGAKFRPQGHRGG 600

Query: 601 FGNRTMVSGSNAIPLGLTTRPR 623
           FG+RTMVSGSNAIPLGL TRPR
Sbjct: 601 FGHRTMVSGSNAIPLGLATRPR 622

[Close]

BLAST of CsaV3_1G001160 vs. TrEMBL
Match: tr|A0A0A0LRZ9|A0A0A0LRZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004080 PE=3 SV=1)

HSP 1 Score: 890.2 bits (2299), Expect = 2.7e-255
Identity = 510/510 (100.00%), Postives = 510/510 (100.00%), Query Frame = 0


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60

Query: 61  PNAGGVNGLPRFQPXXXXXXXXXXXXXXXXXXXXXXRTFDAERGGXXXXXXXXXXXXXXX 120
           PNAGGVNGLPRFQPXXXXXXXXXXXXXXXXXXXXXXRTFDAERGGXXXXXXXXXXXXXXX
Sbjct: 61  PNAGGVNGLPRFQPXXXXXXXXXXXXXXXXXXXXXXRTFDAERGGXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           XXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180

Query: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD
Sbjct: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240

Query: 241 LVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300
           LVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH
Sbjct: 241 LVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM
Sbjct: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGL 511
           KQAERDLVLSEFKSGRNPIMTATDVAARGL
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGL 510

[Close]

BLAST of CsaV3_1G001160 vs. TrEMBL
Match: tr|A0A1S3CLN1|A0A1S3CLN1_CUCME (DEAD-box ATP-dependent RNA helicase 30 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502377 PE=3 SV=1)

HSP 1 Score: 862.8 bits (2228), Expect = 4.6e-247
Identity = 496/510 (97.25%), Postives = 500/510 (98.04%), Query Frame = 0


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60
           MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL
Sbjct: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGGGGAL 60

Query: 61  PNAGGVNGLPRFQPXXXXXXXXXXXXXXXXXXXXXXRTFDAERGGXXXXXXXXXXXXXXX 120
            NAGGVNGLPRFQP XXXXXXXXXXXXXXXXXXXXX  FD+ERG XXXXXXXXXXXXXXX
Sbjct: 61  ANAGGVNGLPRFQPPXXXXXXXXXXXXXXXXXXXXXXXFDSERGXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVRAMTESEV 180
           XXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVR MTESEV
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYTECPSVRVMTESEV 180

Query: 181 KIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240
           KIYRERRDIRVEGYDVP+PIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD
Sbjct: 181 KIYRERRDIRVEGYDVPKPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPMALKGRD 240

Query: 241 LVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELAVQIQQEATKFGLH 300
           L+GIAETGSGKTLAYLLPA+IHISAQPRLS GEGPIVLVLAPTRELAVQIQQEATKFGL 
Sbjct: 241 LIGIAETGSGKTLAYLLPALIHISAQPRLSHGEGPIVLVLAPTRELAVQIQQEATKFGLR 300

Query: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360
           ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM
Sbjct: 301 ANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 360

Query: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSPDLKANQSI 420
           LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGS DLKANQSI
Sbjct: 361 LDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKVIIGSSDLKANQSI 420

Query: 421 NQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480
           NQVVEVLPEAEKYRRLIKLL EVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK
Sbjct: 421 NQVVEVLPEAEKYRRLIKLLVEVMDGSRILIFVETKKGCDKVTRQLRMDGWPALSIHGDK 480

Query: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGL 511
           KQAERDLVLSEFKSGRNPIMTATDVAARGL
Sbjct: 481 KQAERDLVLSEFKSGRNPIMTATDVAARGL 510

[Close]

BLAST of CsaV3_1G001160 vs. TrEMBL
Match: tr|A0A2R6PDI7|A0A2R6PDI7_ACTCH (DEAD-box ATP-dependent RNA helicase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc29663 PE=3 SV=1)

HSP 1 Score: 778.1 bits (2008), Expect = 1.5e-221
Identity = 436/635 (68.66%), Postives = 474/635 (74.65%), Query Frame = 0


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAG----------RESLYKGYQPPPAPYY 60
           MN +D RY DP SYR RRSDL+G QP A P + G                 Y  P  PY 
Sbjct: 2   MNHFDQRYGDPQSYRSRRSDLMGPQPPAVPSMMGGGMGGAVPTYGHGSAAPYGGPRVPYT 61

Query: 61  GRER---GGGGALPNAGGVNGLPRFQPXXXXXXXXXXXXXXXXXXXXXXRTFDAERGGXX 120
             ER   GG G+ P  GG NG P FQP                      R FD  R G  
Sbjct: 62  AGERDTGGGAGSAPGVGGFNGYPPFQP-------------------DVGRGFDIGRRG-- 121

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDNIVLPSQNFGNLVPFEKNFYT 180
                             XXXXXXXXXXXXXXXXXX LDNI LP Q+FGNLVPFEKNFY 
Sbjct: 122 -----GGRSFGGRRGMGFXXXXXXXXXXXXXXXXXXXLDNISLPKQDFGNLVPFEKNFYI 181

Query: 181 ECPSVRAMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPI 240
           ECPSVRAM+E +V +YR RR+I VEG DVPRPIR F+EANFP YCL+VIA+LGFVEPTPI
Sbjct: 182 ECPSVRAMSEQDVMLYRSRREITVEGQDVPRPIRIFEEANFPDYCLEVIARLGFVEPTPI 241

Query: 241 QAQGWPMALKGRDLVGIAETGSGKTLAYLLPAVIHISAQPRLSRGEGPIVLVLAPTRELA 300
           Q+QGWPMALKGRDL+GIAETGSGKTLAYLLPA +H+SAQPRL +GEGPIVLVLAPTRELA
Sbjct: 242 QSQGWPMALKGRDLIGIAETGSGKTLAYLLPAFVHVSAQPRLVQGEGPIVLVLAPTRELA 301

Query: 301 VQIQQEATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLR 360
           VQIQ+EA KFG H NIRSTC+YGGAPKGPQIRDL+ GVEIVIATPGRLIDMLEA +TNL+
Sbjct: 302 VQIQEEALKFGSHTNIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQNTNLK 361

Query: 361 RVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQFLRNAYKV 420
           RVTYLVLDEADRMLDMGFEPQIR IV+QIRPDRQTLYWSATWPREVE LARQFLRN YKV
Sbjct: 362 RVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVETLARQFLRNPYKV 421

Query: 421 IIGSPDLKANQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVETKKGCDKVTRQLR 480
           IIGS DLKANQSINQVVEV+ E EKY RLI+LL E MDGSRILIF+ETKKGCD+VTRQLR
Sbjct: 422 IIGSADLKANQSINQVVEVVKEVEKYNRLIRLLKEAMDGSRILIFMETKKGCDQVTRQLR 481

Query: 481 MDGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKDIKCVINFDFPSSL 540
           MDGWPALSIHGDK QAERD VL+EFKSGR+PIMTATDVAARGLDVKDIKCVIN+DFPSSL
Sbjct: 482 MDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKCVINYDFPSSL 541

Query: 541 EDYVHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKILREAGQIVTPALSALASSSG--F 600
           EDYVHR                            IKIL+EAGQIV P LS +A S+G   
Sbjct: 542 EDYVHRIGRTGRAGATGIAVSFFTHANAKFARDLIKILQEAGQIVPPPLSNMARSAGSSL 601

Query: 601 GGSGAKFRSQGHRGGFGNRTMVSGSNAIPLGLTTR 621
           G SG  FRS+G RGGFGNR+++SGSN IPLG + R
Sbjct: 602 GASGGNFRSRG-RGGFGNRSLISGSNTIPLGGSQR 609

[Close]

BLAST of CsaV3_1G001160 vs. TrEMBL
Match: tr|A0A061FVC8|A0A061FVC8_THECC (p-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_012168 PE=3 SV=1)

HSP 1 Score: 760.4 bits (1962), Expect = 3.2e-216
Identity = 461/648 (71.14%), Postives = 505/648 (77.93%), Query Frame = 0


Query: 1   MNPYDHRYADPNSYRDRRSDLVGFQPAAPPPIAGRESLYKGYQPPPAPYYGRERGG---- 60
           MNPYD RY DP SYR RRSD +G  P    P  G E +      PPA      RGG    
Sbjct: 1   MNPYDRRYGDPESYRQRRSDFMGQPPPVGLPAMGPEMV------PPAGATSYPRGGNVPY 60

Query: 61  ---------------GGALPNAGGVNGLPRFQPXXXXXXXXXXXXXXXXXXXXXXRTFDA 120
                           GA+P  G  +  P FQP                         + 
Sbjct: 61  GGPPTAQPPTFQGRVSGAVPGTGNFDTYPSFQPVAG--------------------RLEM 120

Query: 121 ERGG-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDNIVL 180
            RGG           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDN+ L
Sbjct: 121 GRGGGMGNGHVGDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDNVSL 180

Query: 181 PSQNFGNLVPFEKNFYTECPSVRAMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPA 240
           P QNFGNLVPFEKNFY E P+VR MTE E  +YR+ RDI ++G+DVP+P R F EANFP 
Sbjct: 181 PRQNFGNLVPFEKNFYVESPAVRGMTEQEAMVYRKTRDITIQGHDVPKPTRMFHEANFPD 240

Query: 241 YCLDVIAKLGFVEPTPIQAQGWPMALKGRDLVGIAETGSGKTLAYLLPAVIHISAQPRLS 300
           YCL+VIA+LGFVEPTPIQAQGWPMALKGRDL+GIAETGSGKTLAYLLPA++H++AQPRL+
Sbjct: 241 YCLEVIARLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLA 300

Query: 301 RGEGPIVLVLAPTRELAVQIQQEATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIA 360
            GEGPIVL+LAPTRELAVQIQ+EA KF  HANIRSTC+YGGAPKGPQIRDLK GVEIVIA
Sbjct: 301 HGEGPIVLILAPTRELAVQIQEEAAKFATHANIRSTCIYGGAPKGPQIRDLKRGVEIVIA 360

Query: 361 TPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWP 420
           TPGRLIDMLEA HT+L+RVTYLVLDEADRMLDMGFEPQIR IV+QIRPDRQTLYWSATWP
Sbjct: 361 TPGRLIDMLEAQHTSLQRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWP 420

Query: 421 REVEKLARQFLRNAYKVIIGSPDLKANQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRIL 480
           REVE LARQFLRN YKVIIGSPDLKANQSINQVVEV+ E EKY RLIKLL EVMDG+RIL
Sbjct: 421 REVESLARQFLRNPYKVIIGSPDLKANQSINQVVEVVTELEKYNRLIKLLKEVMDGNRIL 480

Query: 481 IFVETKKGCDKVTRQLRMDGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGL 540
           IF+ETKKGCD+VTRQLRMDGWPALSIHGDK Q+ERD VL+EFKSGR+PIMTATDVAARGL
Sbjct: 481 IFMETKKGCDQVTRQLRMDGWPALSIHGDKNQSERDWVLAEFKSGRSPIMTATDVAARGL 540

Query: 541 DVKDIKCVINFDFPSSLEDYVHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKILREAGQ 600
           DVKDIKCVIN+DFPSSLEDYVHR XXXXXXXXXXXXXXXXX          IK+L++AGQ
Sbjct: 541 DVKDIKCVINYDFPSSLEDYVHRIXXXXXXXXXXXXXXXXXQANAKYARDLIKLLQDAGQ 600

Query: 601 IVTPALSALASS--SGFGGSGAKFRSQGHRGGFGNRTMVSGSNAIPLG 617
           +V+PALS LA S  S FGGS   FRS+G RGG+GNR+ +SGSN IPLG
Sbjct: 601 VVSPALSTLARSAASSFGGSRGNFRSRG-RGGYGNRSSISGSNTIPLG 621

The following BLAST results are available for this feature:

BLAST of CsaV3_1G001160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138092.1	8.4e-301	100.00	PREDICTED: DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucumis sativus]	[more]
XP_008464517.1	5.1e-290	96.62	PREDICTED: DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucumis melo]	[more]
XP_022987231.1	6.5e-269	87.04	DEAD-box ATP-dependent RNA helicase 20-like [Cucurbita maxima]	[more]
XP_022965035.1	4.2e-268	87.14	DEAD-box ATP-dependent RNA helicase 20-like [Cucurbita moschata]	[more]
XP_023516950.1	7.2e-268	86.66	DEAD-box ATP-dependent RNA helicase 20-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_1G001160 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G63120.2	9.8e-195	64.76	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G55150.1	3.5e-176	69.49	DEA(D/H)-box RNA helicase family protein	[more]
AT3G01540.2	2.5e-113	50.96	DEAD box RNA helicase 1	[more]
AT3G06480.1	2.9e-106	49.88	DEAD box RNA helicase family protein	[more]
AT1G20920.1	6.1e-104	46.00	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

BLAST of CsaV3_1G001160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5N7W4\|RH30_ORYSJ	1.2e-197	76.01	DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
sp\|Q8W4R3\|RH30_ARATH	1.8e-193	64.76	DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana OX=3702 GN=RH30 P...	[more]
sp\|Q5QMN3\|RH20_ORYSJ	2.6e-176	73.64	DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
sp\|Q9C718\|RH20_ARATH	6.3e-175	69.49	DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana OX=3702 GN=RH20 P...	[more]
sp\|G0SFM2\|DBP2_CHATD	5.6e-147	62.67	ATP-dependent RNA helicase DBP2 OS=Chaetomium thermophilum (strain DSM 1495 / CB...	[more]

BLAST of CsaV3_1G001160 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CLM7\|A0A1S3CLM7_CUCME	3.4e-290	96.62	DEAD-box ATP-dependent RNA helicase 20 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A0A0LRZ9\|A0A0A0LRZ9_CUCSA	2.7e-255	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004080 PE=3 SV=1	[more]
tr\|A0A1S3CLN1\|A0A1S3CLN1_CUCME	4.6e-247	97.25	DEAD-box ATP-dependent RNA helicase 30 isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A2R6PDI7\|A0A2R6PDI7_ACTCH	1.5e-221	68.66	DEAD-box ATP-dependent RNA helicase OS=Actinidia chinensis var. chinensis OX=159...	[more]
tr\|A0A061FVC8\|A0A061FVC8_THECC	3.2e-216	71.14	p-loop containing nucleoside triphosphate hydrolases superfamily protein isoform...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR014014	RNA_helicase_DEAD_Q_motif
IPR000629	RNA-helicase_DEAD-box_CS
IPR011545	DEAD/DEAH_box_helicase_dom
IPR014001	Helicase_ATP-bd
IPR001650	Helicase_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
biological_process	GO:0006412	translation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G001160.1	CsaV3_1G001160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 460..541 e-value: 4.1E-32 score: 122.7
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 431..541 e-value: 1.9E-29 score: 102.2
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 435..580 score: 23.286
IPR001650	Helicase, C-terminal	CDD	cd00079	HELICc	coord: 420..549 e-value: 1.92468E-40 score: 142.762
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 220..423 e-value: 6.6E-68 score: 241.6
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 232..407 score: 32.955
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 164..411 e-value: 2.0E-88 score: 297.9
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 414..578 e-value: 4.6E-53 score: 180.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	PANTHER	PTHR24031:SF269	DEAD-BOX ATP-DEPENDENT RNA HELICASE 30	coord: 113..608
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 113..608
None	No IPR available	CDD	cd00268	DEADc	coord: 203..407 e-value: 4.62476E-103 score: 312.882
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 225..396 e-value: 3.2E-50 score: 170.2
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 353..361
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 201..229 score: 10.625
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 274..561

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G001160	CSPI01G01060	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G001160	Cucsa.196530	Cucumber (Gy14) v1	cgycucB314
CsaV3_1G001160	CmoCh10G001020	Cucurbita moschata (Rifu)	cmocucB0044
CsaV3_1G001160	Cp4.1LG04g05430	Cucurbita pepo (Zucchini)	cpecucB0804
CsaV3_1G001160	Cp4.1LG03g07430	Cucurbita pepo (Zucchini)	cpecucB0739
CsaV3_1G001160	CsGy1G001110	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G001160	Carg15617	Silver-seed gourd	carcucB0398
CsaV3_1G001160	Carg09720	Silver-seed gourd	carcucB0466
CsaV3_1G001160	Cla019225	Watermelon (97103) v1	cucwmB105
CsaV3_1G001160	MELO3C026263	Melon (DHL92) v3.5.1	cucmeB053
CsaV3_1G001160	ClCG06G017320	Watermelon (Charleston Gray)	cucwcgB088
CsaV3_1G001160	Lsi06G015870	Bottle gourd (USVL1VR-Ls)	cuclsiB081
CsaV3_1G001160	MELO3C026263.2	Melon (DHL92) v3.6.1	cucmedB050
CsaV3_1G001160	Cla97C06G127010	Watermelon (97103) v2	cucwmbB076
CsaV3_1G001160	Bhi02G000385	Wax gourd	cucwgoB103

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G001160	Cucumber (Chinese Long) v3	cuccucB002
CsaV3_1G001160	Silver-seed gourd	carcucB0395
CsaV3_1G001160	Silver-seed gourd	carcucB1095
CsaV3_1G001160	Cucumber (Gy14) v2	cgybcucB106
CsaV3_1G001160	Cucumber (Gy14) v1	cgycucB520
CsaV3_1G001160	Cucurbita maxima (Rimu)	cmacucB0058
CsaV3_1G001160	Cucurbita maxima (Rimu)	cmacucB0100
CsaV3_1G001160	Cucurbita maxima (Rimu)	cmacucB0117
CsaV3_1G001160	Cucurbita moschata (Rifu)	cmocucB0091
CsaV3_1G001160	Cucurbita moschata (Rifu)	cmocucB0094
CsaV3_1G001160	Cucurbita moschata (Rifu)	cmocucB0261
CsaV3_1G001160	Cucurbita moschata (Rifu)	cmocucB0801
CsaV3_1G001160	Cucurbita pepo (Zucchini)	cpecucB0442
CsaV3_1G001160	Cucurbita pepo (Zucchini)	cpecucB0473
CsaV3_1G001160	Cucurbita pepo (Zucchini)	cpecucB0814
CsaV3_1G001160	Wild cucumber (PI 183967)	cpicucB131
CsaV3_1G001160	Bottle gourd (USVL1VR-Ls)	cuclsiB049
CsaV3_1G001160	Watermelon (Charleston Gray)	cucwcgB002
CsaV3_1G001160	Watermelon (Charleston Gray)	cucwcgB006
CsaV3_1G001160	Watermelon (Charleston Gray)	cucwcgB100
CsaV3_1G001160	Watermelon (97103) v1	cucwmB003
CsaV3_1G001160	Watermelon (97103) v1	cucwmB007
CsaV3_1G001160	Watermelon (97103) v2	cucwmbB093
CsaV3_1G001160	Wax gourd	cucwgoB009
CsaV3_1G001160	Wax gourd	cucwgoB060