CsaV3_1G001150 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G001150
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 645969 .. 646175 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCTGAATTTTGGATATCAGCCAATTCGAAGTTCGAACCTTAAGGCCCTGACCCATTCGTATTGGGCCTTGAAGCCCATAATCATTCAAACCGACCGAATAGTTTCATTTCAATTTGTTCTCATCTCTAAATATGAACCCTTCTTCTTCGTCTTCGCGCTGTGGATCTTGAATAACTCGAACCGGAATAGTCAGAAACTCTGA

mRNA sequence

ATGGGCCTGAATTTTGGATATCAGCCAATTCGAAGTTCGAACCTTAAGGCCCTGACCCATTCGTATTGGGCCTTGAAGCCCATAATCATTCAAACCGACCGAATAGTTTCATTTCAATTTGTTCTCATCTCTAAATATGAACCCTTCTTCTTCGTCTTCGCGCTGTGGATCTTGAATAACTCGAACCGGAATAGTCAGAAACTCTGA

Coding sequence (CDS)

ATGGGCCTGAATTTTGGATATCAGCCAATTCGAAGTTCGAACCTTAAGGCCCTGACCCATTCGTATTGGGCCTTGAAGCCCATAATCATTCAAACCGACCGAATAGTTTCATTTCAATTTGTTCTCATCTCTAAATATGAACCCTTCTTCTTCGTCTTCGCGCTGTGGATCTTGAATAACTCGAACCGGAATAGTCAGAAACTCTGA

Protein sequence

MGLNFGYQPIRSSNLKALTHSYWALKPIIIQTDRIVSFQFVLISKYEPFFFVFALWILNNSNRNSQKL
Homology
[Close]
BLAST of CsaV3_1G001150 vs. NCBI nr
Match: KGN63541.1 (hypothetical protein Csa_1G004070 [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MGLNFGYQPIRSSNLKALTHSYWALKPIIIQTDRIVSFQFVLISKYEPFFFVFALWILNN 60
          MGLNFGYQPIRSSNLKALTHSYWALKPIIIQTDRIVSFQFVLISKYEPFFFVFALWILNN
Sbjct: 1  MGLNFGYQPIRSSNLKALTHSYWALKPIIIQTDRIVSFQFVLISKYEPFFFVFALWILNN 60

Query: 61 SNRNSQKL 69
          SNRNSQKL
Sbjct: 61 SNRNSQKL 68

[Close]
BLAST of CsaV3_1G001150 vs. TrEMBL
Match: tr|A0A0A0LU73|A0A0A0LU73_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004070 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 7.8e-31
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MGLNFGYQPIRSSNLKALTHSYWALKPIIIQTDRIVSFQFVLISKYEPFFFVFALWILNN 60
          MGLNFGYQPIRSSNLKALTHSYWALKPIIIQTDRIVSFQFVLISKYEPFFFVFALWILNN
Sbjct: 1  MGLNFGYQPIRSSNLKALTHSYWALKPIIIQTDRIVSFQFVLISKYEPFFFVFALWILNN 60

Query: 61 SNRNSQKL 69
          SNRNSQKL
Sbjct: 61 SNRNSQKL 68

The following BLAST results are available for this feature:
BLAST of CsaV3_1G001150 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63541.11.2e-30100.00hypothetical protein Csa_1G004070 [Cucumis sativus][more]
BLAST of CsaV3_1G001150 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G001150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G001150 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LU73|A0A0A0LU73_CUCSA7.8e-31100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004070 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G001150.1CsaV3_1G001150.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G001150Cucumber (Chinese Long) v3cuccucB002
CsaV3_1G001150Silver-seed gourdcarcucB0395
CsaV3_1G001150Silver-seed gourdcarcucB0398
CsaV3_1G001150Silver-seed gourdcarcucB0466
CsaV3_1G001150Silver-seed gourdcarcucB1095
CsaV3_1G001150Melon (DHL92) v3.5.1cucmeB053
CsaV3_1G001150Cucumber (Gy14) v2cgybcucB002
CsaV3_1G001150Cucumber (Gy14) v2cgybcucB106
CsaV3_1G001150Cucumber (Gy14) v1cgycucB314
CsaV3_1G001150Cucumber (Gy14) v1cgycucB520
CsaV3_1G001150Cucurbita maxima (Rimu)cmacucB0058
CsaV3_1G001150Cucurbita maxima (Rimu)cmacucB0100
CsaV3_1G001150Cucurbita maxima (Rimu)cmacucB0117
CsaV3_1G001150Cucurbita moschata (Rifu)cmocucB0044
CsaV3_1G001150Cucurbita moschata (Rifu)cmocucB0091
CsaV3_1G001150Cucurbita moschata (Rifu)cmocucB0094
CsaV3_1G001150Cucurbita moschata (Rifu)cmocucB0261
CsaV3_1G001150Cucurbita moschata (Rifu)cmocucB0801
CsaV3_1G001150Cucurbita pepo (Zucchini)cpecucB0442
CsaV3_1G001150Cucurbita pepo (Zucchini)cpecucB0473
CsaV3_1G001150Cucurbita pepo (Zucchini)cpecucB0739
CsaV3_1G001150Cucurbita pepo (Zucchini)cpecucB0804
CsaV3_1G001150Cucurbita pepo (Zucchini)cpecucB0814
CsaV3_1G001150Wild cucumber (PI 183967)cpicucB001
CsaV3_1G001150Wild cucumber (PI 183967)cpicucB131
CsaV3_1G001150Bottle gourd (USVL1VR-Ls)cuclsiB049
CsaV3_1G001150Bottle gourd (USVL1VR-Ls)cuclsiB081
CsaV3_1G001150Melon (DHL92) v3.6.1cucmedB050
CsaV3_1G001150Watermelon (Charleston Gray)cucwcgB002
CsaV3_1G001150Watermelon (Charleston Gray)cucwcgB006
CsaV3_1G001150Watermelon (Charleston Gray)cucwcgB088
CsaV3_1G001150Watermelon (Charleston Gray)cucwcgB100
CsaV3_1G001150Watermelon (97103) v1cucwmB003
CsaV3_1G001150Watermelon (97103) v1cucwmB007
CsaV3_1G001150Watermelon (97103) v1cucwmB105
CsaV3_1G001150Watermelon (97103) v2cucwmbB076
CsaV3_1G001150Watermelon (97103) v2cucwmbB093
CsaV3_1G001150Wax gourdcucwgoB009
CsaV3_1G001150Wax gourdcucwgoB060
CsaV3_1G001150Wax gourdcucwgoB103