CsaV3_1G001060 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G001060
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 611409 .. 612550 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTAATATCACAAATTTATGCTAGAAGAGATGCCCATGTTAGTAATATATAAATACATTGAAAATACAAAATAAATTTATGAGTTAAATCATAGTCTCACTTTTCTACCGTCAATCAATATACTTTCAACATTTATTTACTTTGGTCTCTATACTTACAAAATGTCCACTTTGATCTATATCGAAAAGTGGTAATTTAATTTAGTGAAAAAGGTCAATATAAGTCACTTTTAAAAGTATTGAATTCAAAACGAATCAAAGTTAAAAAGAGAGTAATAACATTGGATTGAGATGAGTATTTTAATAGTAATAAGTGATGAATCAAAATTACGAAAATAATATATATTTTGTTTAGTACAACTACGATACAAACTTTACATTATAATTAATGTAAGAGTTAGAGGTTTAACTTTTTAGACTACATATAGAAAATGGATTGAGTGTTGATGTTAAAACTTTAAAGTAAGTGTTTTGAAACCAAAACCTAATTATAAATTTTTACCGTTACAAAACCGGTAAAATTCACCCAAATTTCATCTCTCCGGAAAAGGAAAAGGAAAGAAAAGAAGAAGTTAAGCGGAGAAAGAAGAAAGAAGATAGATCTCCGTGGAACGAAGGACAGCGAGGAAGCTGAAGAGGGCGGCGAAAGCAACAGCAAGAAGACCTCTTTCTTTAACGATTACGGAGGCCAAGTACATGGCTACATCGGCGGTGATCTTTCTCCCATCTTTGACCAGAACTCGCCGTCGGTTTCCAGCGAATGCCAATAGCACCAACACCGTGATCCACGCCACCATCGTGGCTCTGGCCGCCATCAACGCCACTACGGCCACCGCCAACAACCCCAGAATTGGTAGCCACCGCCCCATTAAATTATCGGAATTGAAAACGAGAAAACACAAACCTGAAAGCAGAACAAAAATGGCGGAGGTGGCCGTCGCCGTCGTGGGTGTCAACATGATTGTTGTAGTGTTGATTAGAGAAGAATGTGAACAGAGTACAGAGTGTTGAGAAACTTTCCCAATTATATATATTGTTTATATATATATATATATAAGGAAATTGGAGGTTAAATCTTCAATTTTGATTGATTGATTTAAAGAATTGGTGTTCGGAATGGAATTGGCAGGCATGTGCATGCA

mRNA sequence

ATGGCTACATCGGCGGTGATCTTTCTCCCATCTTTGACCAGAACTCGCCGTCGGTTTCCAGCGAATGCCAATAGCACCAACACCGTGATCCACGCCACCATCGTGGCTCTGGCCGCCATCAACGCCACTACGGCCACCGCCAACAACCCCAGAATTGGTAGCCACCGCCCCATTAAATTATCGGAATTGAAAACGAGAAAACACAAACCTGAAAGCAGAACAAAAATGGCGGAGGTGGCCGTCGCCGTCGTGGGTGTCAACATGATTGTTGTAGTGTTGATTAGAGAAGAATGTGAACAGAGTACAGAGTGTTGA

Coding sequence (CDS)

ATGGCTACATCGGCGGTGATCTTTCTCCCATCTTTGACCAGAACTCGCCGTCGGTTTCCAGCGAATGCCAATAGCACCAACACCGTGATCCACGCCACCATCGTGGCTCTGGCCGCCATCAACGCCACTACGGCCACCGCCAACAACCCCAGAATTGGTAGCCACCGCCCCATTAAATTATCGGAATTGAAAACGAGAAAACACAAACCTGAAAGCAGAACAAAAATGGCGGAGGTGGCCGTCGCCGTCGTGGGTGTCAACATGATTGTTGTAGTGTTGATTAGAGAAGAATGTGAACAGAGTACAGAGTGTTGA

Protein sequence

MATSAVIFLPSLTRTRRRFPANANSTNTVIHATIVALAAINATTATANNPRIGSHRPIKLSELKTRKHKPESRTKMAEVAVAVVGVNMIVVVLIREECEQSTEC
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G001060.1CsaV3_1G001060.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G001060Cp4.1LG04g15800Cucurbita pepo (Zucchini)cpecucB0805
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G001060Silver-seed gourdcarcucB0395
CsaV3_1G001060Silver-seed gourdcarcucB0398
CsaV3_1G001060Silver-seed gourdcarcucB0466
CsaV3_1G001060Silver-seed gourdcarcucB1095
CsaV3_1G001060Melon (DHL92) v3.5.1cucmeB053
CsaV3_1G001060Cucumber (Gy14) v2cgybcucB002
CsaV3_1G001060Cucumber (Gy14) v1cgycucB314
CsaV3_1G001060Cucurbita maxima (Rimu)cmacucB0058
CsaV3_1G001060Cucurbita maxima (Rimu)cmacucB0100
CsaV3_1G001060Cucurbita maxima (Rimu)cmacucB0117
CsaV3_1G001060Cucurbita maxima (Rimu)cmacucB0126
CsaV3_1G001060Cucurbita maxima (Rimu)cmacucB0273
CsaV3_1G001060Cucurbita moschata (Rifu)cmocucB0044
CsaV3_1G001060Cucurbita moschata (Rifu)cmocucB0091
CsaV3_1G001060Cucurbita moschata (Rifu)cmocucB0094
CsaV3_1G001060Cucurbita moschata (Rifu)cmocucB0261
CsaV3_1G001060Cucurbita moschata (Rifu)cmocucB0801
CsaV3_1G001060Cucurbita pepo (Zucchini)cpecucB0441
CsaV3_1G001060Cucurbita pepo (Zucchini)cpecucB0442
CsaV3_1G001060Cucurbita pepo (Zucchini)cpecucB0473
CsaV3_1G001060Cucurbita pepo (Zucchini)cpecucB0739
CsaV3_1G001060Cucurbita pepo (Zucchini)cpecucB0804
CsaV3_1G001060Cucurbita pepo (Zucchini)cpecucB0814
CsaV3_1G001060Wild cucumber (PI 183967)cpicucB001
CsaV3_1G001060Wild cucumber (PI 183967)cpicucB126
CsaV3_1G001060Bottle gourd (USVL1VR-Ls)cuclsiB081
CsaV3_1G001060Melon (DHL92) v3.6.1cucmedB050
CsaV3_1G001060Watermelon (Charleston Gray)cucwcgB002
CsaV3_1G001060Watermelon (Charleston Gray)cucwcgB082
CsaV3_1G001060Watermelon (Charleston Gray)cucwcgB088
CsaV3_1G001060Watermelon (Charleston Gray)cucwcgB100
CsaV3_1G001060Watermelon (97103) v1cucwmB003
CsaV3_1G001060Watermelon (97103) v1cucwmB103
CsaV3_1G001060Watermelon (97103) v1cucwmB105
CsaV3_1G001060Watermelon (97103) v2cucwmbB070
CsaV3_1G001060Watermelon (97103) v2cucwmbB076
CsaV3_1G001060Watermelon (97103) v2cucwmbB093
CsaV3_1G001060Wax gourdcucwgoB009
CsaV3_1G001060Wax gourdcucwgoB086
CsaV3_1G001060Wax gourdcucwgoB123
CsaV3_1G001060Cucumber (Chinese Long) v3cuccucB017