CsaV3_1G001030 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGAAAATGGGGGAAGAAAATTAGATGATCTTGAAAGTTATTTGGTTTCAGAGTCGTTGAAGATGAGATTGAATGGAGATCAGAAATGGGAGGAAGTGATTAGAGAGATAAAGAAGCAGATGGGGTTGGCTGGTCCTCTGGTTTTGGTGAGTTTTCTGCAGTATAGTTTGCAGCTGATATCTATTATGTTCATTGGCCATCTTGGAGAACTTCAACTCTCTGGTGCTTCAATGGCTCTCTCTTTTGCTGGAGTCACTGGCTTTAGTCTCTTGGTATATATACATTTTCTTTTCCCCTTTCTTTGATCTTCTCTGCTTCTTCTTTTCCCCCATTGTTTTCTTTTGAAACTCCTCATTTTTGGTTTCAACCACTGCATTTTTCGGTTGTGAAATAGACGATTGAAGATAAACGGAGAACATAAACGATAGAGAATCGTCACAGAGATTTACTTGCTTCACTAGACGTGTGTTAGTACTGTTTATTATTAGAGAGAAAATATCTGATTACAGATTCAAAGAGGCGCCCCTCAGTTTAGAGAGTTGATATGAAGCTCTCCTCTAAACCATGTGTTTAGTTATTCAGAGTGTCTGATATATAAAATTTAAGGCATTCCCAACATTTTCAAAATGTTTCTTACTTTGTTTCATCTAACTTCATTGATCCTTAAAAAATGTTTCAATATGGCATTTGACACTTCAAACAATCTAAAGATGGAATCTTGTTGCTATATTATCTCTCTAACCTTACTTGTCACTCAATAATACGATGTTTTCTCTCTGGTGTAGCCAAGACACTATCAGTCAACCACATAAATTTGAATATCGTTTTTCTATTGTTTACGCTTTCTGTTTATCTTCGACAGTCGATTTCTTAACAGTTTTCTTTTGAAACTCCTCCATTTTTGTTTCAATCCAAACTTTTTGCCACTGAAGTTTTCACAATATCTATGGTTTTGTTTCATTGACTTTTAAACTTCATTGATCTTTAAAATAATGCTTCAATAAATGCAAGATGATCAAACTTTTGGAATTATTTCATTTACAATATGAGCAATGATTAGATAATGATCAACATTATCACAAACATTATTTGAAAGATTGAAGTGTTTGTTTGTTTGTGCAGTTGGGAATGGGCAGTGCATTAGAAACATTATGTGGACAATCGTATGGAGGGAAACAATATGAAATGCTTGGGATTCATATGCAAAGAGCTATGGTTGTTCTGTCACTTATCTGTATTCCCATAGCTGTTTTATGGGCTTCCATTGAACAAATCTTGACCTTTCTTAAACAAGATCCTCTAATCTCAGAACAAGCTGGGATTTATGGAAATGGCTAA ATGGATGAAAATGGGGGAAGAAAATTAGATGATCTTGAAAGTTATTTGGTTTCAGAGTCGTTGAAGATGAGATTGAATGGAGATCAGAAATGGGAGGAAGTGATTAGAGAGATAAAGAAGCAGATGGGGTTGGCTGGTCCTCTGGTTTTGGTGAGTTTTCTGCAGTATAGTTTGCAGCTGATATCTATTATGTTCATTGGCCATCTTGGAGAACTTCAACTCTCTGGTGCTTCAATGGCTCTCTCTTTTGCTGGAGTCACTGGCTTTAGTCTCTTGTTGGGAATGGGCAGTGCATTAGAAACATTATGTGGACAATCGTATGGAGGGAAACAATATGAAATGCTTGGGATTCATATGCAAAGAGCTATGGTTGTTCTGTCACTTATCTGTATTCCCATAGCTGTTTTATGGGCTTCCATTGAACAAATCTTGACCTTTCTTAAACAAGATCCTCTAATCTCAGAACAAGCTGGGATTTATGGAAATGGCTAA ATGGATGAAAATGGGGGAAGAAAATTAGATGATCTTGAAAGTTATTTGGTTTCAGAGTCGTTGAAGATGAGATTGAATGGAGATCAGAAATGGGAGGAAGTGATTAGAGAGATAAAGAAGCAGATGGGGTTGGCTGGTCCTCTGGTTTTGGTGAGTTTTCTGCAGTATAGTTTGCAGCTGATATCTATTATGTTCATTGGCCATCTTGGAGAACTTCAACTCTCTGGTGCTTCAATGGCTCTCTCTTTTGCTGGAGTCACTGGCTTTAGTCTCTTGTTGGGAATGGGCAGTGCATTAGAAACATTATGTGGACAATCGTATGGAGGGAAACAATATGAAATGCTTGGGATTCATATGCAAAGAGCTATGGTTGTTCTGTCACTTATCTGTATTCCCATAGCTGTTTTATGGGCTTCCATTGAACAAATCTTGACCTTTCTTAAACAAGATCCTCTAATCTCAGAACAAGCTGGGATTTATGGAAATGGCTAA MDENGGRKLDDLESYLVSESLKMRLNGDQKWEEVIREIKKQMGLAGPLVLVSFLQYSLQLISIMFIGHLGELQLSGASMALSFAGVTGFSLLLGMGSALETLCGQSYGGKQYEMLGIHMQRAMVVLSLICIPIAVLWASIEQILTFLKQDPLISEQAGIYGNG
BLAST of CsaV3_1G001030 vs. NCBI nr
Match: KGN63528.1 (hypothetical protein Csa_1G003460 [Cucumis sativus]) HSP 1 Score: 308.5 bits (789), Expect = 1.3e-80 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. NCBI nr
Match: XP_004138084.2 (PREDICTED: MATE efflux family protein DTX1 [Cucumis sativus] >XP_011654149.1 PREDICTED: MATE efflux family protein DTX1 [Cucumis sativus] >KGN63531.1 hypothetical protein Csa_1G003490 [Cucumis sativus]) HSP 1 Score: 297.0 bits (759), Expect = 4.0e-77 Identity = 154/161 (95.65%), Postives = 159/161 (98.76%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. NCBI nr
Match: XP_008464505.1 (PREDICTED: protein DETOXIFICATION 16-like isoform X1 [Cucumis melo]) HSP 1 Score: 259.2 bits (661), Expect = 9.3e-66 Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. NCBI nr
Match: XP_016903202.1 (PREDICTED: protein DETOXIFICATION 16-like isoform X2 [Cucumis melo]) HSP 1 Score: 259.2 bits (661), Expect = 9.3e-66 Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. NCBI nr
Match: XP_022933689.1 (protein DETOXIFICATION 16-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 234.6 bits (597), Expect = 2.4e-58 Identity = 130/165 (78.79%), Postives = 143/165 (86.67%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. TAIR10
Match: AT5G52450.1 (MATE efflux family protein) HSP 1 Score: 150.2 bits (378), Expect = 1.1e-36 Identity = 79/143 (55.24%), Postives = 101/143 (70.63%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. TAIR10
Match: AT1G73700.1 (MATE efflux family protein) HSP 1 Score: 148.3 bits (373), Expect = 4.2e-36 Identity = 76/127 (59.84%), Postives = 96/127 (75.59%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. TAIR10
Match: AT2G34360.1 (MATE efflux family protein) HSP 1 Score: 146.0 bits (367), Expect = 2.1e-35 Identity = 71/127 (55.91%), Postives = 97/127 (76.38%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. TAIR10
Match: AT1G71140.1 (MATE efflux family protein) HSP 1 Score: 132.5 bits (332), Expect = 2.4e-31 Identity = 70/150 (46.67%), Postives = 102/150 (68.00%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. TAIR10
Match: AT2G04050.1 (MATE efflux family protein) HSP 1 Score: 123.2 bits (308), Expect = 1.4e-28 Identity = 69/148 (46.62%), Postives = 91/148 (61.49%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. Swiss-Prot
Match: sp|Q9FHB6|DTX16_ARATH (Protein DETOXIFICATION 16 OS=Arabidopsis thaliana OX=3702 GN=DTX16 PE=2 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 2.0e-35 Identity = 79/143 (55.24%), Postives = 101/143 (70.63%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. Swiss-Prot
Match: sp|Q9C9U1|DTX17_ARATH (Protein DETOXIFICATION 17 OS=Arabidopsis thaliana OX=3702 GN=DTX17 PE=2 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 7.5e-35 Identity = 76/127 (59.84%), Postives = 96/127 (75.59%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. Swiss-Prot
Match: sp|F4IHU9|DTX15_ARATH (Protein DETOXIFICATION 15 OS=Arabidopsis thaliana OX=3702 GN=DTX15 PE=3 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 3.7e-34 Identity = 71/127 (55.91%), Postives = 97/127 (76.38%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. Swiss-Prot
Match: sp|Q9C994|DTX14_ARATH (Protein DETOXIFICATION 14 OS=Arabidopsis thaliana OX=3702 GN=DTX14 PE=1 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 4.3e-30 Identity = 70/150 (46.67%), Postives = 102/150 (68.00%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. Swiss-Prot
Match: sp|Q9SIA4|DTX3_ARATH (Protein DETOXIFICATION 3 OS=Arabidopsis thaliana OX=3702 GN=DTX3 PE=3 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 2.6e-27 Identity = 69/148 (46.62%), Postives = 91/148 (61.49%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. TrEMBL
Match: tr|A0A0A0LP16|A0A0A0LP16_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003460 PE=4 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 8.8e-81 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. TrEMBL
Match: tr|A0A0A0LU67|A0A0A0LU67_CUCSA (Protein DETOXIFICATION OS=Cucumis sativus OX=3659 GN=Csa_1G003490 PE=3 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 2.7e-77 Identity = 154/161 (95.65%), Postives = 159/161 (98.76%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. TrEMBL
Match: tr|A0A1S3CLM1|A0A1S3CLM1_CUCME (Protein DETOXIFICATION OS=Cucumis melo OX=3656 GN=LOC103502367 PE=3 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 6.1e-66 Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. TrEMBL
Match: tr|A0A1S4E4Q3|A0A1S4E4Q3_CUCME (Protein DETOXIFICATION OS=Cucumis melo OX=3656 GN=LOC103502367 PE=3 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 6.1e-66 Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0
BLAST of CsaV3_1G001030 vs. TrEMBL
Match: tr|A0A2P5FG28|A0A2P5FG28_9ROSA (Protein DETOXIFICATION OS=Trema orientalis OX=63057 GN=TorRG33x02_074350 PE=3 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 3.0e-44 Identity = 94/129 (72.87%), Postives = 112/129 (86.82%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |