CsaV3_1G000860 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAAACAAATATATACAAAGTTAGACTAATTTTTATATATCATTTGGTCTGTCTCAAAAGTCATATCTATCTATACTGTGAAAAATTCTCTTCGCTAAAATCAAAGTAACAAACTAATTAGAGGCGGAGGGGAATGGCTTCTGGTATAGAGTCCGGTGGGCACAACCCGGCACTCGACTACGATACCGACGTACCTGAAAATCCAGCCTACGAGTTTGCAGAGTTCGGCGCCGGTTGTTTTTGGGGGGCAGAGCTTGCCTTCCAGCGAGTTGTTGGTGTGGTCAAAACGGAGGTTGGTTATTCTCAAGGCCATACTCCAGATCCAACTTATAAACAAGTTTGCTCTGGAATTACCAATCATGTGGAGGTTGTTCGGGTCGCATTCGACCCGAAAGTCTGCCCTTACACCAACCTGCTCTCTCTCTTTTGGTCTCGCATTGATCCCACCTCCCTCAATCGCCAAGTATGCAAAACATCCACTTTCTACAAACATTTGTTTTTTTTATATGATTTCTATAAACTCAAGGTTTCTGTTCTGTTTGTGTTATGGTATGACAAAGGGGAACGATAAAGGGGCTCAGTATCGATCGGGGATATACTACTTCAACGAGACACAAGCTCGTTTAGCTCATGAATCCAAAGAAGCCAAGAAGTTGGAGTTGAAAGACAAAGAAGTTGTAACAGAGATTCTTCCAGCCAAGAGATTCTATAGGGCAGAAGAGTACCATCAGCAGTATTTGGAGAAAGGAGGAGGGAAAGGCCACAAACAATCTGCTGGAAAGGGTTGCACTGATCCCATTAGATGCTATGGTTAAGGCCAAACCAACCAAGAATAATTACATTGTGTGTTTTTGTTAATCCTCTGCTTTTGTTGCTTCTGGGTTTGGTTGAGACTGGGGCTTGCCTATTATATCACAAAGTTGCACATGTAATAAAAGTTCGAGGCTTCTCTATGCTATCATCACATGTGTTTTTTACTCCTCTTTCCATTTCTCTTTAAAACAATGCTAAATAAAAGCAATTCATTATCTTAAGGAGACAGTAAGTATATAATGCTGCAGAAAACAATAAATAACAACCAAAAGCATACTACACACCAAAATGAAATAAGCCGAATGCTCATTGATTGATTAAAATCGTAATGTTTGGTAAAACAATGGAAACAGAAGAATTGCTATACGATCAGATGAATAAAATGATGAACTAACTTTATACCACACTTTTAACTCTATCTACTGTACATCAAGTGGAAAGCATGTGAGAAACTGTGTGTGCGTATCACCACACTACTTCAGTTCCATGTAAATATTATACCATTTCTGTCTGCAGACGCAAGCGGTTTTCCAAGCCCACTCCATGAACAACATAGAACAGATGCAGTGCTCTCTTTCAGAGTGCTAACGATATCATGTTTTGATATTGACCACACATGAACTGACCCATCTGCAGAACCAGCTGCAACGTAGTTGTCGTCTGGACTGATGCAAGAACGGCTCCAATTGGAAGCTACTCTATTTCCAGATGCCCTTAATGTCCCACAGACTTCCAAAGATCGGATATCAAATAAATTATGCAAGTTATCTCTCCCACTAGTCAATATTGTATTGCCATTACGTGACAAAGAAAGAGATGTAACAGCAAGGGAGTGTCCAGCAACTTCGCTAATCAATTTTCCTGTTTGAATATCCCACAACCGAAGATTTCCATCCACATGGCCAGAACAAATGGTCTGTCCATCCATGCTGAAGCGAACTGCATTACAATTGCTGGCAAAAATGAAGGTCTTGGTGCAGTAACCCTTCTGTAGGTCCCAAATTTTAATGGTGCGATCATATGCAGCACTCACAACATAGCGGCTAGAAACTTTGCTTACATCTACAGCACATACTTTGTCGGAGTGACCAGTCAACGTATGGCGCACCCTTCCAGAACTGATGTCCCATGCATATAAGTTGTTTGAACTGCTTGCTGCAATAACAGATCTATTATCATGGGTAATGGCAAGATCAAGAACAGAACCAAGGCACCCATGTAGAGTGGAACTTAATGATCCAGTATTTGTATCCCACAATTTGACTGTACGGTCCTGCCCCCCACTGATCAACTTTCCTGAGTTATTTTCGAACAATATAGTACCACAGCCCCCTTCATGGCCACGGATCCTGTGCTTGCACACTGAGGGTACAGTGGATTCCACAAAGAATTCAGCACCCTCTTCACTTTGGCGAACCACGCCATCAACCTGTTGCTGAGCAAGTTTCTCTAAACCACTAGCCTTGAGTCGGTCAATCATATCCTCATAGAGTGCATTTGCCTGATAAATAACAAAAGAGACATTTACATTCACATTTGGGTTTCATGTGGGGGTGGGGAGGTGAATTTACTTCATTTCGAAAGACAACAATTCATGAACCAATTCCTGCTCTCTAAACTGAATTAAAGATAGCAAATTTCCACCTTCTGCATTCAAAGTGGCATATTAACCAATGGATCAACAAGAACTTCATGGAACTAACTTCACAAAATTCCAAAAGCCCATAAAACCAATGTGCTACACTTTATCAACTGGGGAATTCAGGCATTAAGAATATCAAATTGGACTTTTCCATTTAACCCTTCTGAAGCACTTACAGTTAAGATCATGAGAACATTATGATCATCATAAAATCAAACAAACAAACAAAAAAAGAAAGCACGAGAAATTGTCTACATTATTACATGATGGACATGTGAACTAAAAATTTTGTGTTAAGAGTATTTTATAAGCCAGTTAGTGATTCAAAATTCAAACTAAAGCAGGTTACCTATACCAGAACTCACTCCTAAGTCCCAGCAGCGTATGAAAAAAAAAAGAGATTGTGCTATCTATTTGAACAATAACTAAAATCTATATTTTCAACCAAATGACGTAGAAAAAAGATGAACAAAAACAAAACAAAAATACAAAGACCTCATTGAGACGTTCTGCGTCCTGCATCTTTTGAAGCATCCACCGGTCAACCAACATTTTATTTTCAGCCTCTGCGTTCTTAGCTTTAACTGTCATTGCTTCAAGCTGTGTTTTAATTTCTTGATTCTCACATAAAGCCAGTTCCAGAGCTTTAAGTTTAATCTCTAAGTCTGCCTTCAACTGAGAGCATTCATCCCTGAATCACGTAAGAACTTCCAAACATTCATACAACATATCGATCTAGATTCATCAATCAATTCCCAACTCCAAAATGTCCAAGAATTACGAATGAAAAAGAGGGCAAACCTGGCTCGACTTAATTCCTGCTCCAAATTATCAATCACGGCCTCTTTCTCCCCAATCAAAGATTTAGAAGTTCGAACCTCAGCAACTTCAACCACAAGTTGCTCAGATAATCGTGATTGAGCCTTGTAACATTGCTGAAGCTCCAATTCCAACTTCTCCGCTTTCTCTTTCCATTCCGAACTCTAAAAAGGAACATAACACAAATACCCCAATAACAAGTTTAAACTGAAACCGAGATTTTTTTGGAATCAAATGGTGGGGAAGAGATTTTAGAAAGTGGGTAATGGTGAAAATGATCAAAAGTGAATGAAAAATGGAAGAAATCAAAGAGAAGAAGAGACCTGGGTTATGATGGGGCGAGAGAGAGCGAGAAAAGCAGGAGCATGCGCACCTTCTTCAAGGAGATGGCGTTGCCGGAGGGCTCTTAGAGCGTGCTTAATCGCTTCGTTTGCTATCTCGTTTGGGGACATGATCATAATCGATCGTCCACTGCAAAAGGAGAAAACTTCTTATGATTGATTCAAGAAATTTCTATATAAACAAATGAAACCCAATCATTTTGTTGTTGTTCGCTTGAATTGTAGATAAAGCATCATCATCCCTCTACCCTAATTTTCATTACTTATTCACAAACCCCAAATAAAT ATGGCTTCTGGTATAGAGTCCGGTGGGCACAACCCGGCACTCGACTACGATACCGACGTACCTGAAAATCCAGCCTACGAGTTTGCAGAGTTCGGCGCCGGTTGTTTTTGGGGGGCAGAGCTTGCCTTCCAGCGAGTTGTTGGTGTGGTCAAAACGGAGGTTGGTTATTCTCAAGGCCATACTCCAGATCCAACTTATAAACAAGTTTGCTCTGGAATTACCAATCATGTGGAGGTTGTTCGGGTCGCATTCGACCCGAAAGTCTGCCCTTACACCAACCTGCTCTCTCTCTTTTGGTCTCGCATTGATCCCACCTCCCTCAATCGCCAAGGGAACGATAAAGGGGCTCAGTATCGATCGGGGATATACTACTTCAACGAGACACAAGCTCGTTTAGCTCATGAATCCAAAGAAGCCAAGAAGTTGGAGTTGAAAGACAAAGAAGTTGTAACAGAGATTCTTCCAGCCAAGAGATTCTATAGGGCAGAAGAGTACCATCAGCAGTATTTGGAGAAAGGAGGAGGGAAAGGCCACAAACAATCTGCTGGAAAGGGTTGCACTGATCCCATTAGATGCTATGGTTAA ATGGCTTCTGGTATAGAGTCCGGTGGGCACAACCCGGCACTCGACTACGATACCGACGTACCTGAAAATCCAGCCTACGAGTTTGCAGAGTTCGGCGCCGGTTGTTTTTGGGGGGCAGAGCTTGCCTTCCAGCGAGTTGTTGGTGTGGTCAAAACGGAGGTTGGTTATTCTCAAGGCCATACTCCAGATCCAACTTATAAACAAGTTTGCTCTGGAATTACCAATCATGTGGAGGTTGTTCGGGTCGCATTCGACCCGAAAGTCTGCCCTTACACCAACCTGCTCTCTCTCTTTTGGTCTCGCATTGATCCCACCTCCCTCAATCGCCAAGGGAACGATAAAGGGGCTCAGTATCGATCGGGGATATACTACTTCAACGAGACACAAGCTCGTTTAGCTCATGAATCCAAAGAAGCCAAGAAGTTGGAGTTGAAAGACAAAGAAGTTGTAACAGAGATTCTTCCAGCCAAGAGATTCTATAGGGCAGAAGAGTACCATCAGCAGTATTTGGAGAAAGGAGGAGGGAAAGGCCACAAACAATCTGCTGGAAAGGGTTGCACTGATCCCATTAGATGCTATGGTTAA MASGIESGGHNPALDYDTDVPENPAYEFAEFGAGCFWGAELAFQRVVGVVKTEVGYSQGHTPDPTYKQVCSGITNHVEVVRVAFDPKVCPYTNLLSLFWSRIDPTSLNRQGNDKGAQYRSGIYYFNETQARLAHESKEAKKLELKDKEVVTEILPAKRFYRAEEYHQQYLEKGGGKGHKQSAGKGCTDPIRCYG
BLAST of CsaV3_1G000860 vs. NCBI nr
Match: XP_004138072.1 (PREDICTED: peptide methionine sulfoxide reductase-like [Cucumis sativus] >KGN63512.1 hypothetical protein Csa_1G002810 [Cucumis sativus]) HSP 1 Score: 409.8 bits (1052), Expect = 5.1e-111 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. NCBI nr
Match: XP_008464484.1 (PREDICTED: peptide methionine sulfoxide reductase-like [Cucumis melo]) HSP 1 Score: 398.7 bits (1023), Expect = 1.2e-107 Identity = 187/194 (96.39%), Postives = 190/194 (97.94%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. NCBI nr
Match: XP_022987559.1 (peptide methionine sulfoxide reductase-like [Cucurbita maxima]) HSP 1 Score: 367.5 bits (942), Expect = 2.9e-98 Identity = 174/194 (89.69%), Postives = 179/194 (92.27%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. NCBI nr
Match: XP_022921949.1 (peptide methionine sulfoxide reductase-like [Cucurbita moschata]) HSP 1 Score: 365.9 bits (938), Expect = 8.4e-98 Identity = 171/194 (88.14%), Postives = 180/194 (92.78%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. NCBI nr
Match: XP_023515786.1 (peptide methionine sulfoxide reductase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 365.9 bits (938), Expect = 8.4e-98 Identity = 172/194 (88.66%), Postives = 180/194 (92.78%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. TAIR10
Match: AT5G61640.1 (peptidemethionine sulfoxide reductase 1) HSP 1 Score: 246.9 bits (629), Expect = 1.0e-65 Identity = 117/184 (63.59%), Postives = 138/184 (75.00%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. TAIR10
Match: AT4G25130.1 (peptide met sulfoxide reductase 4) HSP 1 Score: 235.0 bits (598), Expect = 4.0e-62 Identity = 111/178 (62.36%), Postives = 136/178 (76.40%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. TAIR10
Match: AT5G07470.1 (peptidemethionine sulfoxide reductase 3) HSP 1 Score: 231.1 bits (588), Expect = 5.8e-61 Identity = 110/178 (61.80%), Postives = 132/178 (74.16%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. TAIR10
Match: AT5G07460.1 (peptidemethionine sulfoxide reductase 2) HSP 1 Score: 229.9 bits (585), Expect = 1.3e-60 Identity = 109/171 (63.74%), Postives = 130/171 (76.02%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. TAIR10
Match: AT2G18030.1 (Peptide methionine sulfoxide reductase family protein) HSP 1 Score: 106.7 bits (265), Expect = 1.7e-23 Identity = 61/159 (38.36%), Postives = 86/159 (54.09%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. Swiss-Prot
Match: sp|P54152|MSRA_FRAAN (Peptide methionine sulfoxide reductase OS=Fragaria ananassa OX=3747 PE=2 SV=2) HSP 1 Score: 304.3 bits (778), Expect = 9.8e-82 Identity = 140/185 (75.68%), Postives = 158/185 (85.41%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. Swiss-Prot
Match: sp|P54153|MSRA_SOLLC (Peptide methionine sulfoxide reductase (Fragment) OS=Solanum lycopersicum OX=4081 GN=E4 PE=3 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 2.4e-80 Identity = 138/184 (75.00%), Postives = 153/184 (83.15%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. Swiss-Prot
Match: sp|Q9FKF7|MSRA1_ARATH (Peptide methionine sulfoxide reductase A1 OS=Arabidopsis thaliana OX=3702 GN=MSRA1 PE=2 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 1.9e-64 Identity = 117/184 (63.59%), Postives = 138/184 (75.00%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. Swiss-Prot
Match: sp|Q9SEC2|MSRA_LACSA (Peptide methionine sulfoxide reductase OS=Lactuca sativa OX=4236 PE=2 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 6.0e-63 Identity = 115/178 (64.61%), Postives = 135/178 (75.84%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. Swiss-Prot
Match: sp|P54150|MSRA4_ARATH (Peptide methionine sulfoxide reductase A4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MSR4 PE=1 SV=2) HSP 1 Score: 235.0 bits (598), Expect = 7.3e-61 Identity = 111/178 (62.36%), Postives = 136/178 (76.40%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. TrEMBL
Match: tr|A0A0A0LRY2|A0A0A0LRY2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002810 PE=3 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 3.3e-111 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. TrEMBL
Match: tr|A0A1S3CLK2|A0A1S3CLK2_CUCME (peptide methionine sulfoxide reductase-like OS=Cucumis melo OX=3656 GN=LOC103502352 PE=3 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 7.7e-108 Identity = 187/194 (96.39%), Postives = 190/194 (97.94%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. TrEMBL
Match: tr|A0A2I4E6E2|A0A2I4E6E2_9ROSI (peptide methionine sulfoxide reductase-like OS=Juglans regia OX=51240 GN=LOC108986724 PE=3 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 1.5e-90 Identity = 159/188 (84.57%), Postives = 170/188 (90.43%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. TrEMBL
Match: tr|H2ESC5|H2ESC5_MORAL (Methionine sulfoxide reductase OS=Morus alba var. multicaulis OX=170012 GN=MMSR PE=2 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 3.0e-88 Identity = 156/194 (80.41%), Postives = 170/194 (87.63%), Query Frame = 0
BLAST of CsaV3_1G000860 vs. TrEMBL
Match: tr|A0A2P4GX19|A0A2P4GX19_QUESU (Peptide methionine sulfoxide reductase OS=Quercus suber OX=58331 GN=CFP56_49857 PE=3 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 8.9e-88 Identity = 155/194 (79.90%), Postives = 169/194 (87.11%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |