CsaV3_1G000540 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAACAAGAACGGAGAAGAACCAAACCTTTCAAGATCCGACGATTATATTGTTAATGGGAATAAAGATCAAGTTGACGAAGAACCCAACAAATCCCATCACGACGAAACCGATAGCTGTACGGAATGCCACTTTAGTGAATTCTGTGTCACAGTG AAAACAAGAACGGAGAAGAACCAAACCTTTCAAGATCCGACGATTATATTGTTAATGGGAATAAAGATCAAGTTGACGAAGAACCCAACAAATCCCATCACGACGAAACCGATAGCTGTACGGAATGCCACTTTAGTGAATTCTGTGTCACAGTG AAAACAAGAACGGAGAAGAACCAAACCTTTCAAGATCCGACGATTATATTGTTAATGGGAATAAAGATCAAGTTGACGAAGAACCCAACAAATCCCATCACGACGAAACCGATAGCTGTACGGAATGCCACTTTAGTGAATTCTGTGTCACAGTG KTRTEKNQTFQDPTIILLMGIKIKLTKNPTNPITTKPIAVRNATLVNSVSQX
BLAST of CsaV3_1G000540 vs. NCBI nr
Match: AFK44844.1 (unknown [Medicago truncatula]) HSP 1 Score: 56.2 bits (134), Expect = 3.8e-05 Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = 0
BLAST of CsaV3_1G000540 vs. NCBI nr
Match: XP_019460968.1 (PREDICTED: uncharacterized protein LOC109360483 [Lupinus angustifolius]) HSP 1 Score: 52.8 bits (125), Expect = 4.2e-04 Identity = 26/35 (74.29%), Postives = 31/35 (88.57%), Query Frame = 0
BLAST of CsaV3_1G000540 vs. NCBI nr
Match: AFK41396.1 (unknown [Lotus japonicus]) HSP 1 Score: 52.4 bits (124), Expect = 5.5e-04 Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0
BLAST of CsaV3_1G000540 vs. TrEMBL
Match: tr|I3SX52|I3SX52_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 2.5e-05 Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = 0
BLAST of CsaV3_1G000540 vs. TrEMBL
Match: tr|A0A2P2J6J8|A0A2P2J6J8_RHIMU (Protein transport protein Sec61 subunit gamma-like OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.2e-04 Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 0
BLAST of CsaV3_1G000540 vs. TrEMBL
Match: tr|I3SMA4|I3SMA4_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 3.6e-04 Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0
BLAST of CsaV3_1G000540 vs. TrEMBL
Match: tr|A0A0V0ILI1|A0A0V0ILI1_SOLCH (Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 8.0e-04 Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 0
BLAST of CsaV3_1G000540 vs. TrEMBL
Match: tr|C6SZ59|C6SZ59_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 8.0e-04 Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |