CsaV3_1G000400 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G000400
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionRecq-mediated genome instability protein 1
Locationchr1 : 240899 .. 244669 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAGAAGGCGCCTTCGCCTGAGCTGGTCTTCCGACGAAGACTTGGAACAAGACTCTCACTGCCCTGATTCCTCCCCGACCTCCCTTCAACCAATCATTCTCGACAACCTCAACTCTCATTTTAATCCCAACGTTTCTGAACCCGTCCAAGTTCCCGATTCCGACGACGACGAACAACATTTTATCGACGTCTCCGACCATCTCTCCCCTCCTTCTCCGGATTCTGATCATTCTCTCCCTCACTCCCCCGACCTCAATCCGCTCATTCCTGGTCTCGTTTCCACTCACCCCCCGTGTCCTGTAAGTGACTTCCTTCGGGGACTTGGCTTAAGCTTGAAGAGAGAGTGGTTGGATGCCTGTATCCGCTCTCTACAAGGGTCTGTACCAGGTTTCTTCAGCCTCAACCATTCGGAGAAAGGAAAGCTGTGTTTCGAGCAGTTTTTGGTTTCTGATATGAATTATGTGGGTGCTGGTGTCCTGCCTGAAAATGTTGATTCTATGCATCTCGTTGACCTCCCTGGTCCGTACGTACTGCAGGTTATTTGTGCTAGTTCCTTGAGTTTATACCCATGAATTTCTTTTTGGTTATGATATCATTTTGGTCACTGTATGAAATTTCAGAGGTTATAAGAATGACCTGCTGCTTGAGGTGGGCAAGGTTGTAGAGTCCTAGCTGAATTGTTTTCCTTTTCAGGTCGATGAAATAGTTAACATCAGTTGTGCTCTGAAAGGTAGATATCAGACTGCCCCTGCTAATATTAAGAGGTGCCTTAAACTGTCAATGACGGATGGTGTTCAACGAATTTTTGGGATGGAATACAGACCTATTAAGAATCTTGAAGTTTTGGCCCCTGCTGGGTTGAAGGTTGCTTATCTTTCTCAATCCTCGATCAATTATTCTCTTTTTTCGTCAACCAGGTTTATGTGCTTCGAAACTAGTAGATTAGTTGATGCTAGGGATCAATTATTTATAGCTTTTGTGCAGGTAGTAATCAGCAATGTAAGTGTACGACGTGGGCTTCTAATGCTAGTACCTGAAGCTTTTGAGGTTCTAGGAGGTCTGGTTGAAGAATTGGAGGCAGCTCGGAAGCGGCTTGTTGATGAAGTGAACAAGCCACCTAGAGGAAGCAGGTATTATTAATGCCTAGATTACATAGTTTTCATCCATTCCTTTCTTTGTTGGGTTCCATAGTACAATTTTCTGTGTCCACTATCCAAGGAAGACTTCAAACTTGCGTTTTTGCACAGTTATTTTTTGGTGGACTTTGTCTTTCTTTTCAGAAGAGCTTATCATAGGAACATCATATCTTCTGCTGTTTTCTGGTATTCAATAATTTGTGATTTGTATACTTTGTTCAGAACGAGAACAGGCGTAGTTCCTTCTTTGGCAAGTAGAGCAACACGTGCTGCATGGCCATCAGACAATGTTCAAGAGCCTGGGCATCCTAGTAGAATGGTGGATGCTGAACCCTCTCATTCAAACCAAGGTACTAATCGGTTAAAATTTCCACGTTCTTTCTTTCCGGGCGAAAAGGAAACTTTTTTTTACGTTGCCAACTGGATATTCAGTGTGTCAGATTCCTGGAGACCAATTAGCTGCTACCAGTCTCTATCTTGGGCAATGTTGCCTAATTTCATTCTTCCATCATGTGCATTTTTCGTTCTCCTGTTTTTCTTTAACTATTGATACAAACCGTAGTGGGGAGAAACAGGGATACGACAAGATAACAAAATATGGAAGTGGAAGGGAAATGCCTGTTCACTCTTAATATTATAACTAAATAACTAATTTATTCTGGAATGAAAAAAATTATAAACTTCAAAGTAGGAAGACGACAACTCCTACTAGAATCTGATGTAAATTCCATGGTCTAGTAAAATTATTTGAATATGAAGCCTAATGTTTATCTGAATATAAAAAGATACACAATTGCACAAGGCATTTGATATTTTCCAATAGATTAGCCAAGAATGTCAGCCAAGTTTATAGTGGATGTTTTTTCTTTTATTATTTTTTTGGTCTTGAATTTTATGTTCAATCTGTGTAAACTGGAAAGAGCTCTGTTGTTTAGATAGTGCATCACCAAATTTTCTTTGTTTTTTGGTCTTGACTATCAGGTGCTCGCATGTTCCATAGGGGAAATGAAGCATTTACTGCTCCGGTTGCTGATGCATTTACTACACCAGTCAGTAGAACAAATGCTAATTCTGAGCTATCTTCTAATTTTGTTTCAAATGTTGAGGAGATTCATTCTCATTCCATTCCCAGTGGTAGAGCTCATACTGAGCCTACTATTGTGCCCAATTCGGTAGAGGACTCCAGTGTGGTCAATTCAGTGGACAATACCAATATGGGCAATTCAGTAGACGATTCCAATGCAGTCAACTCGGTAGAGGATACCATCATGGTCGACATCGAGCATCCTCTCATTTTATCTGGCGATAGAGAAATTCCTTTCACTTACTTGGCTAGTTTGTCGGCTAAGTTGGCAGCAGCGAAGGATAAGTCTCCATTAGTTCGGGGAAGAATCAAGGTGGGATAAAAATTCATATTTCTTTACTAGAGGACTAACGCTAACACTTCTTGTTCCAAATGAAAGCAGGGCATTTTTGTTTGTTTGTTTGTAAGCTCCCTACTTGAACAAGATTTGTTCTATGCCCTTGAGTTCTGAAGCTTGTTCATCCTGAAAGCTTAGAATTTATTTCATCAATCCACTGGTCAGATTGATTATTTGTTGGGTCAGGTAACTAACTCGTAATTAATACGGTCAACGTATGTGCAACTTACAGCAGTATTAGATGAATGTTCAGTCTCGTTCCTCTTTATCCCGAGTGGCACCGATGAGGGTAAGGAAATCCTATATGTGGATGACGTGTGGTGTCATAGTTATTATTGGAAGCATGGAGTTACACTTCTGGCTGATCAATATATAGAATTTGGAGCTTGGTTGTTCTAAGCATAATATTTGAAAAATCCGTTTTGTTCCTTTTGACTTAAGTGCTTGGAAACTGCTCATATTGATATACTGAGCATGGCATGGTGAATGAAAATAAAATTAAATGTAAACGGAATCTAATAGTTTCTGTACTTACTGAAATTGAGAACATAATCTTTGTATTTGTAGTGCTTTTTGACTGGTGTAAAAGGATTTCAATTCAAGCGAAGGACAAATTACGAGCTACGTGTGTATGTGGATGACGGCAGCCTCATTTCTGAGGTCCTCATTGATCACGAGGTGAGTCAAATACCGTACAGTTTACACGTACCCTAGTCAAAGAGAACCATATCCGACCGCTTCTTATGTTTGATTATTAGGTTGTGCAAAAAGCGATCGGCCATTCTCCAAAGGATGTTACGGACGCTATTGATTCTTCTGATGTCAAAGTAGTGAGTGCTATGAAGGAGACTTTGAGACAGTTTCAAATTTTCTTAATAAACTTTGAGGTAAACTGATGGCTTCAAGTATTTCTAACTACCAGTTATTGCTTCCTCCCGTCCCGCTAATTTCAAAAGATTATGCCTTTTCTGTATATTAATTGCATATTCTGTATACTTTGAGTTAATTTAAAAGCATTATTCTCTTATATGTTGTTTCATCGAAGGGTACAATGCTGGTTGAGATGAACAGAACGTCTCTTCTGCCAGTTGTCCTTGAGATGTCGGAGGGTTGTCTGGAATCTGATGCTCGGTTGCTCTTGAGAAGACTTGCGTGTTCAAATTCTGTTCCAACTGATGAACATGCCCGTATTATAGACGTATCCCCTTAA

mRNA sequence

ATGACAAGAAGGCGCCTTCGCCTGAGCTGGTCTTCCGACGAAGACTTGGAACAAGACTCTCACTGCCCTGATTCCTCCCCGACCTCCCTTCAACCAATCATTCTCGACAACCTCAACTCTCATTTTAATCCCAACGTTTCTGAACCCGTCCAAGTTCCCGATTCCGACGACGACGAACAACATTTTATCGACGTCTCCGACCATCTCTCCCCTCCTTCTCCGGATTCTGATCATTCTCTCCCTCACTCCCCCGACCTCAATCCGCTCATTCCTGGTCTCGTTTCCACTCACCCCCCGTGTCCTGTAAGTGACTTCCTTCGGGGACTTGGCTTAAGCTTGAAGAGAGAGTGGTTGGATGCCTGTATCCGCTCTCTACAAGGGTCTGTACCAGGTTTCTTCAGCCTCAACCATTCGGAGAAAGGAAAGCTGTGTTTCGAGCAGTTTTTGGTTTCTGATATGAATTATGTGGGTGCTGGTGTCCTGCCTGAAAATGTTGATTCTATGCATCTCGTTGACCTCCCTGGTCCGTACGTACTGCAGGTCGATGAAATAGTTAACATCAGTTGTGCTCTGAAAGGTAGATATCAGACTGCCCCTGCTAATATTAAGAGGTGCCTTAAACTGTCAATGACGGATGGTGTTCAACGAATTTTTGGGATGGAATACAGACCTATTAAGAATCTTGAAGTTTTGGCCCCTGCTGGGTTGAAGGTAGTAATCAGCAATGTAAGTGTACGACGTGGGCTTCTAATGCTAGTACCTGAAGCTTTTGAGGTTCTAGGAGGTCTGGTTGAAGAATTGGAGGCAGCTCGGAAGCGGCTTGTTGATGAAGTGAACAAGCCACCTAGAGGAAGCAGAACGAGAACAGGCGTAGTTCCTTCTTTGGCAAGTAGAGCAACACGTGCTGCATGGCCATCAGACAATGTTCAAGAGCCTGGGCATCCTAGTAGAATGGTGGATGCTGAACCCTCTCATTCAAACCAAGGTGCTCGCATGTTCCATAGGGGAAATGAAGCATTTACTGCTCCGGTTGCTGATGCATTTACTACACCAGTCAGTAGAACAAATGCTAATTCTGAGCTATCTTCTAATTTTGTTTCAAATGTTGAGGAGATTCATTCTCATTCCATTCCCAGTGGTAGAGCTCATACTGAGCCTACTATTGTGCCCAATTCGGTAGAGGACTCCAGTGTGGTCAATTCAGTGGACAATACCAATATGGGCAATTCAGTAGACGATTCCAATGCAGTCAACTCGGTAGAGGATACCATCATGGTCGACATCGAGCATCCTCTCATTTTATCTGGCGATAGAGAAATTCCTTTCACTTACTTGGCTAGTTTGTCGGCTAAGTTGGCAGCAGCGAAGGATAAGTCTCCATTAGTTCGGGGAAGAATCAAGTGCTTTTTGACTGGTGTAAAAGGATTTCAATTCAAGCGAAGGACAAATTACGAGCTACGTGTGTATGTGGATGACGGCAGCCTCATTTCTGAGGTCCTCATTGATCACGAGGTTGTGCAAAAAGCGATCGGCCATTCTCCAAAGGATGTTACGGACGCTATTGATTCTTCTGATGTCAAAGTAGTGAGTGCTATGAAGGAGACTTTGAGACAGTTTCAAATTTTCTTAATAAACTTTGAGGGTACAATGCTGGTTGAGATGAACAGAACGTCTCTTCTGCCAGTTGTCCTTGAGATGTCGGAGGGTTGTCTGGAATCTGATGCTCGGTTGCTCTTGAGAAGACTTGCGTGTTCAAATTCTGTTCCAACTGATGAACATGCCCGTATTATAGACGTATCCCCTTAA

Coding sequence (CDS)

ATGACAAGAAGGCGCCTTCGCCTGAGCTGGTCTTCCGACGAAGACTTGGAACAAGACTCTCACTGCCCTGATTCCTCCCCGACCTCCCTTCAACCAATCATTCTCGACAACCTCAACTCTCATTTTAATCCCAACGTTTCTGAACCCGTCCAAGTTCCCGATTCCGACGACGACGAACAACATTTTATCGACGTCTCCGACCATCTCTCCCCTCCTTCTCCGGATTCTGATCATTCTCTCCCTCACTCCCCCGACCTCAATCCGCTCATTCCTGGTCTCGTTTCCACTCACCCCCCGTGTCCTGTAAGTGACTTCCTTCGGGGACTTGGCTTAAGCTTGAAGAGAGAGTGGTTGGATGCCTGTATCCGCTCTCTACAAGGGTCTGTACCAGGTTTCTTCAGCCTCAACCATTCGGAGAAAGGAAAGCTGTGTTTCGAGCAGTTTTTGGTTTCTGATATGAATTATGTGGGTGCTGGTGTCCTGCCTGAAAATGTTGATTCTATGCATCTCGTTGACCTCCCTGGTCCGTACGTACTGCAGGTCGATGAAATAGTTAACATCAGTTGTGCTCTGAAAGGTAGATATCAGACTGCCCCTGCTAATATTAAGAGGTGCCTTAAACTGTCAATGACGGATGGTGTTCAACGAATTTTTGGGATGGAATACAGACCTATTAAGAATCTTGAAGTTTTGGCCCCTGCTGGGTTGAAGGTAGTAATCAGCAATGTAAGTGTACGACGTGGGCTTCTAATGCTAGTACCTGAAGCTTTTGAGGTTCTAGGAGGTCTGGTTGAAGAATTGGAGGCAGCTCGGAAGCGGCTTGTTGATGAAGTGAACAAGCCACCTAGAGGAAGCAGAACGAGAACAGGCGTAGTTCCTTCTTTGGCAAGTAGAGCAACACGTGCTGCATGGCCATCAGACAATGTTCAAGAGCCTGGGCATCCTAGTAGAATGGTGGATGCTGAACCCTCTCATTCAAACCAAGGTGCTCGCATGTTCCATAGGGGAAATGAAGCATTTACTGCTCCGGTTGCTGATGCATTTACTACACCAGTCAGTAGAACAAATGCTAATTCTGAGCTATCTTCTAATTTTGTTTCAAATGTTGAGGAGATTCATTCTCATTCCATTCCCAGTGGTAGAGCTCATACTGAGCCTACTATTGTGCCCAATTCGGTAGAGGACTCCAGTGTGGTCAATTCAGTGGACAATACCAATATGGGCAATTCAGTAGACGATTCCAATGCAGTCAACTCGGTAGAGGATACCATCATGGTCGACATCGAGCATCCTCTCATTTTATCTGGCGATAGAGAAATTCCTTTCACTTACTTGGCTAGTTTGTCGGCTAAGTTGGCAGCAGCGAAGGATAAGTCTCCATTAGTTCGGGGAAGAATCAAGTGCTTTTTGACTGGTGTAAAAGGATTTCAATTCAAGCGAAGGACAAATTACGAGCTACGTGTGTATGTGGATGACGGCAGCCTCATTTCTGAGGTCCTCATTGATCACGAGGTTGTGCAAAAAGCGATCGGCCATTCTCCAAAGGATGTTACGGACGCTATTGATTCTTCTGATGTCAAAGTAGTGAGTGCTATGAAGGAGACTTTGAGACAGTTTCAAATTTTCTTAATAAACTTTGAGGGTACAATGCTGGTTGAGATGAACAGAACGTCTCTTCTGCCAGTTGTCCTTGAGATGTCGGAGGGTTGTCTGGAATCTGATGCTCGGTTGCTCTTGAGAAGACTTGCGTGTTCAAATTCTGTTCCAACTGATGAACATGCCCGTATTATAGACGTATCCCCTTAA

Protein sequence

MTRRRLRLSWSSDEDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQHFIDVSDHLSPPSPDSDHSLPHSPDLNPLIPGLVSTHPPCPVSDFLRGLGLSLKREWLDACIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGPYVLQVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAGLKVVISNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNTNMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHARIIDVSP
Homology
[Close]
BLAST of CsaV3_1G000400 vs. NCBI nr
Match: XP_004138254.1 (PREDICTED: recQ-mediated genome instability protein 1 isoform X1 [Cucumis sativus] >KGN63468.1 hypothetical protein Csa_1G001400 [Cucumis sativus])

HSP 1 Score: 1061.2 bits (2743), Expect = 1.3e-306
Identity = 601/601 (100.00%), Postives = 601/601 (100.00%), Query Frame = 0 

Query: 1   MTRRRLRLSWSSDEDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ 60
           MTRRRLRLSWSSDEDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ
Sbjct: 1   MTRRRLRLSWSSDEDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ 60

Query: 61  HFIDVSDHLSPPSPDXXXXXXXXXXXXXXXXXXXXTHPPCPVSDFLRGLGLSLKREWLDA 120
           HFIDVSDHLSPPSPDXXXXXXXXXXXXXXXXXXXXTHPPCPVSDFLRGLGLSLKREWLDA
Sbjct: 61  HFIDVSDHLSPPSPDXXXXXXXXXXXXXXXXXXXXTHPPCPVSDFLRGLGLSLKREWLDA 120

Query: 121 CIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGPYVLQ 180
           CIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGPYVLQ
Sbjct: 121 CIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGPYVLQ 180

Query: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAGLKVVI 240
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAGLKVVI 240

Query: 241 SNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSLASRAT 300
           SNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSLASRAT
Sbjct: 241 SNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSLASRAT 300

Query: 301 RAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRTNANSE 360
           RAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRTNANSE
Sbjct: 301 RAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRTNANSE 360

Query: 361 LSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           LSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 LSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKGFQFKR 480
           XXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKGFQFKR
Sbjct: 421 XXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKGFQFKR 480

Query: 481 RTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKETLRQFQ 540
           RTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKETLRQFQ
Sbjct: 481 RTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKETLRQFQ 540

Query: 541 IFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHARIIDVS 600
           IFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHARIIDVS
Sbjct: 541 IFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHARIIDVS 600

Query: 601 P 602
           P
Sbjct: 601 P 601

[Close]
BLAST of CsaV3_1G000400 vs. NCBI nr
Match: XP_008464406.1 (PREDICTED: recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 990.3 bits (2559), Expect = 2.8e-285
Identity = 564/601 (93.84%), Postives = 578/601 (96.17%), Query Frame = 0 

Query: 1   MTRRRLRLSWSSDEDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ 60
           MTRRRLRLS SSDEDLEQDSHC DSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ
Sbjct: 1   MTRRRLRLSSSSDEDLEQDSHCLDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ 60

Query: 61  HFIDVSDHLSPPSPDXXXXXXXXXXXXXXXXXXXXTHPPCPVSDFLRGLGLSLKREWLDA 120
           HFIDVSDHLSPPSPDXXXXXXXXXXXXXXXX    THPPCPVSDFLRGLGLSLKREWL A
Sbjct: 61  HFIDVSDHLSPPSPDXXXXXXXXXXXXXXXXGLASTHPPCPVSDFLRGLGLSLKREWLGA 120

Query: 121 CIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGPYVLQ 180
           CIRSLQ SVPGFFSLNHS KGKLCFEQFLVSDMNY GAGVLPENVDSMHLVDLPGPYVLQ
Sbjct: 121 CIRSLQESVPGFFSLNHSAKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ 180

Query: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAGLKVVI 240
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQR+FGMEYRPIK+LEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240

Query: 241 SNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSLASRAT 300
           S+VSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRG RTRTGVVPSLASRAT
Sbjct: 241 SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 300

Query: 301 RAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRTNANSE 360
            AAWPSDNVQEPGH SRMVDAEPS S+QGAR+FHRGNEAF+APVADAFTTPVSRTNANSE
Sbjct: 301 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 360

Query: 361 LSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           LSSNFVSNVEEI SHSIPSGRA  EPTIVPN  XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKGFQFKR 480
           XXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAK+K P VRGRIKCFLTGVKGFQFK+
Sbjct: 421 XXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 480

Query: 481 RTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKETLRQFQ 540
           RT YELRV+VDDGSLISEVLID+EVVQKAIGHSPKDVTDA+DSSDVKVVSAMKETLRQFQ
Sbjct: 481 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 540

Query: 541 IFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHARIIDVS 600
           IFLINFEGTMLVEMN+TS LPVVLEM+EGCLESDARLLLRRLACSN+VPTDEHARIIDVS
Sbjct: 541 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARIIDVS 600

Query: 601 P 602
           P
Sbjct: 601 P 601

[Close]
BLAST of CsaV3_1G000400 vs. NCBI nr
Match: XP_023515609.1 (recQ-mediated genome instability protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 863.6 bits (2230), Expect = 3.9e-247
Identity = 480/608 (78.95%), Postives = 514/608 (84.54%), Query Frame = 0 

Query: 1   MTRRRLRLSWSSD-----EDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDS 60
           M RRRLRLS SSD     ED E D HCPDSS TSLQP I+DNLNSHFNPNVSEPVQ+ D 
Sbjct: 1   MPRRRLRLSCSSDEDHENEDFEHDPHCPDSSATSLQPPIIDNLNSHFNPNVSEPVQLSD- 60

Query: 61  DDDEQHFIDVSDHLSPPSPDXXXXXXXXXXXXXXXXXXXXTHPPCPVSDFLRGLGLSLKR 120
           DDDEQ FIDVS+HLSPPSPD                      P CPVS+FLRGLGLSL R
Sbjct: 61  DDDEQDFIDVSEHLSPPSPD---SDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLNR 120

Query: 121 EWLDACIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPG 180
           EWLDACIR+  GSVPGF SLN +EKGKLCFEQFLVSDMNY GAGVLPENVDSMHLVDLPG
Sbjct: 121 EWLDACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPG 180

Query: 181 PYVLQVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAG 240
           PYVLQVDEIVNISC LKGRYQT+PA+IKRCLKLSMTDGVQR+FGMEYRPIK LEVLAPAG
Sbjct: 181 PYVLQVDEIVNISCPLKGRYQTSPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAG 240

Query: 241 LKVVISNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSL 300
           LKVVI NV+VRRG+LMLVPEAFEVLGGLVEELE+AR+RLVDEVNKPPRG RTRTGVVP L
Sbjct: 241 LKVVICNVTVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPL 300

Query: 301 ASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRT 360
           A+RAT AAWPSD V EP   SR+VDAEPS S+QG  MFHRGNEA TAPV+DAFTTPVSRT
Sbjct: 301 ATRATHAAWPSDTVPEPVPSSRIVDAEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVSRT 360

Query: 361 NANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVXXXXXXXXXXXXXXXXXXXXXX 420
           NANSELS+NFVSNVEE+H HS+PS RA T  TI+ NS+            XXXXXXXXXX
Sbjct: 361 NANSELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSI---------EDTXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKG 480
           XXXXXXXXXXXXIEHPLILSGDRE+PFTYLASLSAK A+ K+KSP VRG+IKCFLTGVKG
Sbjct: 421 XXXXXXXXXXXXIEHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKG 480

Query: 481 FQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKET 540
           FQF++RT Y+L  YVDDGSLISEVLIDHE VQ+AIGHSPKDVTDA+ SSDVKVVS MKE 
Sbjct: 481 FQFRQRTTYDLHAYVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEA 540

Query: 541 LRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHAR 600
           LRQFQIFL+NFEGTMLVEMNRTS LPVVLEM EGCLESDA LLLRRL CSN+V T+EHAR
Sbjct: 541 LRQFQIFLVNFEGTMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTNEHAR 595

Query: 601 I--IDVSP 602
           I  IDVSP
Sbjct: 601 IDPIDVSP 595

[Close]
BLAST of CsaV3_1G000400 vs. NCBI nr
Match: XP_022921986.1 (recQ-mediated genome instability protein 1 [Cucurbita moschata])

HSP 1 Score: 863.2 bits (2229), Expect = 5.2e-247
Identity = 480/608 (78.95%), Postives = 515/608 (84.70%), Query Frame = 0 

Query: 1   MTRRRLRLSWSSD-----EDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDS 60
           M RRRLRLS SSD     ED E D  CPDSS TSLQP I+DNLNSHFNPNVSEPVQ+ D 
Sbjct: 1   MPRRRLRLSCSSDEDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSD- 60

Query: 61  DDDEQHFIDVSDHLSPPSPDXXXXXXXXXXXXXXXXXXXXTHPPCPVSDFLRGLGLSLKR 120
           DDDEQ FIDVS+HLSPPSPD                      P CPVS+FLRGLGLSLKR
Sbjct: 61  DDDEQDFIDVSEHLSPPSPD---SDHSLRHSPEPNPHVASREPSCPVSEFLRGLGLSLKR 120

Query: 121 EWLDACIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPG 180
           EWLDACIR+  GSVPGF SLN +EKGKLCFEQFLVSDMNY GAGVLPENVDSMHLVDLPG
Sbjct: 121 EWLDACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPG 180

Query: 181 PYVLQVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAG 240
           PYVLQVDEIVNISC LKGRYQTAPA+IKRCLKLSMTDGVQR+FGMEYRPIK LEVLAPAG
Sbjct: 181 PYVLQVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAG 240

Query: 241 LKVVISNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSL 300
           LKVVI NVSVRRG+LMLVPEAFEVLGGLVEELE+AR+RLVDEVNKPPRG RTRTG+VP L
Sbjct: 241 LKVVICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGMVPPL 300

Query: 301 ASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRT 360
           A+RAT AAWPSD V EP H SR+VD EPS S+QG  MFHRGNEA TAPV+DAFTTPVSRT
Sbjct: 301 ATRATHAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMFHRGNEAVTAPVSDAFTTPVSRT 360

Query: 361 NANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVXXXXXXXXXXXXXXXXXXXXXX 420
           NANSELS+NFVSNVEE+H HS+PS R+ T  TI+ NS+           XXXXXXXXXXX
Sbjct: 361 NANSELSTNFVSNVEEVHLHSVPSSRSRTVSTIMSNSI---------EDXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKG 480
           XXXXXXXXXXXXIEHPLILSGDR++PFTYLASLSAK A+ K+KSP VRG+IKCFLTGVKG
Sbjct: 421 XXXXXXXXXXXXIEHPLILSGDRKMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKG 480

Query: 481 FQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKET 540
           FQF++RT Y+L  YVDDGSLISEVLIDHE VQ+AIGHSPKDVTDA+ SSDVKVVS MKE 
Sbjct: 481 FQFRQRTTYDLHAYVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVKVVSGMKEA 540

Query: 541 LRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHAR 600
           LRQFQIFL+NFEGTMLVEMNRTS LPVVLEM EGCLESDA LLLRRL CSN+V T+EHAR
Sbjct: 541 LRQFQIFLVNFEGTMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTNEHAR 595

Query: 601 I--IDVSP 602
           I  IDVSP
Sbjct: 601 IDPIDVSP 595

[Close]
BLAST of CsaV3_1G000400 vs. NCBI nr
Match: XP_022988244.1 (recQ-mediated genome instability protein 1 [Cucurbita maxima])

HSP 1 Score: 852.8 bits (2202), Expect = 7.0e-244
Identity = 475/608 (78.12%), Postives = 511/608 (84.05%), Query Frame = 0 

Query: 1   MTRRRLRLSWSSDEDLEQDS-----HCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDS 60
           M RRRLRLS SSDED E +       CPDSS TSLQP I+DNLNSHFNPNVSEPVQ+ D 
Sbjct: 1   MPRRRLRLSCSSDEDRENEDFEHYPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLSD- 60

Query: 61  DDDEQHFIDVSDHLSPPSPDXXXXXXXXXXXXXXXXXXXXTHPPCPVSDFLRGLGLSLKR 120
           DDDEQ FIDVS+HLSPPSPD                      P CPVS+FLRGLGLSLKR
Sbjct: 61  DDDEQDFIDVSEHLSPPSPD---SDHSLRHSPEPNPYVASCEPSCPVSEFLRGLGLSLKR 120

Query: 121 EWLDACIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPG 180
            WLDACIR+  GS+PGF SLN + KGKLCFEQFLVSDMNY GAGVLPENVDSMHL+DLPG
Sbjct: 121 AWLDACIRAHHGSIPGFLSLNPAGKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLIDLPG 180

Query: 181 PYVLQVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAG 240
           PYVLQVDEIVNISC LKGRYQTAPA+IKRCLKLSMTDGVQR+FGMEYRPIK LEVLAPAG
Sbjct: 181 PYVLQVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDGVQRVFGMEYRPIKGLEVLAPAG 240

Query: 241 LKVVISNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSL 300
           LKVVI NVSVRRG+LMLVPEAFEVLGGLVEELE+AR+RLVDEVNKPPRG RTRTGVVP L
Sbjct: 241 LKVVICNVSVRRGVLMLVPEAFEVLGGLVEELESARQRLVDEVNKPPRGRRTRTGVVPPL 300

Query: 301 ASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRT 360
           A RAT AAWPSD VQEP H SR+VD  PS S+QG  MFHRGNEA T+PV DAFTTPVSRT
Sbjct: 301 ARRATHAAWPSDTVQEPVHSSRIVDTAPSCSDQGVHMFHRGNEAVTSPVCDAFTTPVSRT 360

Query: 361 NANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVXXXXXXXXXXXXXXXXXXXXXX 420
           NA+SELS+NFVSNVEE+H HS+PS RA T  TIV NS+           XXXXXXXXXXX
Sbjct: 361 NAHSELSTNFVSNVEEVHLHSVPSSRARTVSTIVSNSI---------ENXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKG 480
           XXXXXXXXXXXXIEHPLILSGDRE+PFTYLASLSAK A+ K+KSP VRG+IKCFLTGVKG
Sbjct: 421 XXXXXXXXXXXXIEHPLILSGDREMPFTYLASLSAKWASGKEKSPSVRGKIKCFLTGVKG 480

Query: 481 FQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKET 540
           FQF++RT Y+L  YVDDGSLISEVLIDHE VQ+AIGHSPKDVTDA+ SSDV+VVS MKE 
Sbjct: 481 FQFRQRTTYDLHAYVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALGSSDVQVVSGMKEA 540

Query: 541 LRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHAR 600
           LRQFQIFL+NFEGTMLVEMNRTS LPVVLEM EGCLESDA LLLRRL CSN+V T+EHAR
Sbjct: 541 LRQFQIFLVNFEGTMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRLECSNAVQTNEHAR 595

Query: 601 I--IDVSP 602
           +  IDVSP
Sbjct: 601 LDPIDVSP 595

[Close]
BLAST of CsaV3_1G000400 vs. TAIR10
Match: AT5G63540.2 (Domain of unknown function (DUF1767))

HSP 1 Score: 399.8 bits (1026), Expect = 2.9e-111
Identity = 252/568 (44.37%), Postives = 320/568 (56.34%), Query Frame = 0 

Query: 101 PVSDFLRGLGLSLKREWLDACIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGV 160
           P+S+ L  +G+ LKREW  +C+  L+ S+P F  L+ + K K CFEQF+  DMN  G GV
Sbjct: 99  PISEVLSRMGIKLKREWWVSCLSGLETSIPQFSYLDVAAKAKHCFEQFMFFDMNLCGGGV 158

Query: 161 LPENVDSMHLVDLPGPYVLQVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGM 220
           LP NV SM+ ++L GP+VLQVDEIVNI C LKGRY+ A A +KRCLKLSMTDGVQR+FGM
Sbjct: 159 LPPNVASMNRIELAGPFVLQVDEIVNIGCPLKGRYENANAGLKRCLKLSMTDGVQRVFGM 218

Query: 221 EYRPIKNLEVLAPAGLKVVISNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNK 280
           EYRPIK+L+VLAPAGLK+V+S+V VR GLLMLVPE  EVLGG+VEELE ARKRLV EVNK
Sbjct: 219 EYRPIKDLQVLAPAGLKIVVSSVQVRHGLLMLVPEIVEVLGGMVEELEEARKRLVVEVNK 278

Query: 281 PPRGSR---------------------------------TRTGVVPSLASRATRAAWPSD 340
           PPRG                                   TR GVVPSL +RAT AAW  +
Sbjct: 279 PPRGKSWKDYLQPVCFTDFFGYSFFDLENRDWFGVCLTITRVGVVPSLTTRATLAAWSLN 338

Query: 341 NVQEPGH---------PSRMVDAEPSHSNQGARMF----HRGNEAFTAPVADAFTTPVSR 400
                 H              +A  + +NQG  +     H  + A   P+A   +T V  
Sbjct: 339 GNDTGNHVXXXXXXXXXXXXXNASHTQANQGIPVHVTRTHNSSRAMDEPLA---STNVGA 398

Query: 401 TNANSE------LSSNFVSNVEEIHSHSIPSGRAHT------------------------ 460
           T +  E       S++      +IHS S    RA +                        
Sbjct: 399 TVSRVEHMQIDTASAHGERTFSDIHSTSSNIHRAASTAGTGTSCXXXXXXXXXXXXXXXX 458

Query: 461 ----EPTIVPNSV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEHPLILSGDRE 520
               + + V + V                                   +E P +LS + E
Sbjct: 459 XSLDQTSNVTSFVEEMHIDTGRVRDTTTHIYGSDSGGVAAEFSNMVVDLEGPSVLSTNTE 518

Query: 521 IPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEV 580
            PFTYLA LS K A  KD    V+GRIKCFLTGVK FQFK+++ YEL  YVDDGSLI E+
Sbjct: 519 KPFTYLAELSQKWAVMKDTIHFVQGRIKCFLTGVKKFQFKQQSTYELLCYVDDGSLICEI 578

Query: 581 LIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSA-MKETLRQFQIFLINFEGTMLVEMNRTS 587
           L+ ++VVQK IGHS  +VT A+ SS    ++A MKE L++FQ+FL +FEG M+VEMNR+S
Sbjct: 579 LLHNDVVQKRIGHSSMEVTAALSSSAPTSLNAMMKEKLKRFQLFLADFEGIMVVEMNRSS 638

[Close]
BLAST of CsaV3_1G000400 vs. Swiss-Prot
Match: sp|Q5XUX6|RMI1_ARATH (RecQ-mediated genome instability protein 1 OS=Arabidopsis thaliana OX=3702 GN=RMI1 PE=1 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 8.4e-116
Identity = 253/535 (47.29%), Postives = 321/535 (60.00%), Query Frame = 0 

Query: 101 PVSDFLRGLGLSLKREWLDACIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGV 160
           P+S+ L  +G+ LKREW  +C+  L+ S+P F  L+ + K K CFEQF+  DMN  G GV
Sbjct: 99  PISEVLSRMGIKLKREWWVSCLSGLETSIPQFSYLDVAAKAKHCFEQFMFFDMNLCGGGV 158

Query: 161 LPENVDSMHLVDLPGPYVLQVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGM 220
           LP NV SM+ ++L GP+VLQVDEIVNI C LKGRY+ A A +KRCLKLSMTDGVQR+FGM
Sbjct: 159 LPPNVASMNRIELAGPFVLQVDEIVNIGCPLKGRYENANAGLKRCLKLSMTDGVQRVFGM 218

Query: 221 EYRPIKNLEVLAPAGLKVVISNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNK 280
           EYRPIK+L+VLAPAGLK+V+S+V VR GLLMLVPE  EVLGG+VEELE ARKRLV EVNK
Sbjct: 219 EYRPIKDLQVLAPAGLKIVVSSVQVRHGLLMLVPEIVEVLGGMVEELEEARKRLVVEVNK 278

Query: 281 PPRGSRTRTGVVPSLASRATRAAWPSDNVQEPGH---------PSRMVDAEPSHSNQGAR 340
           PPRG RTR GVVPSL +RAT AAW  +      H              +A  + +NQG  
Sbjct: 279 PPRGKRTRVGVVPSLTTRATLAAWSLNGNDTGNHVXXXXXXXXXXXXXNASHTQANQGIP 338

Query: 341 MF----HRGNEAFTAPVADAFTTPVSRTNANSE------LSSNFVSNVEEIHSHSIPSGR 400
           +     H  + A   P+A   +T V  T +  E       S++      +IHS S    R
Sbjct: 339 VHVTRTHNSSRAMDEPLA---STNVGATVSRVEHMQIDTASAHGERTFSDIHSTSSNIHR 398

Query: 401 AHT----------------------------EPTIVPNSV-XXXXXXXXXXXXXXXXXXX 460
           A +                            + + V + V                    
Sbjct: 399 AASTAGTGTSCXXXXXXXXXXXXXXXXXSLDQTSNVTSFVEEMHIDTGRVRDTTTHIYGS 458

Query: 461 XXXXXXXXXXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTG 520
                          +E P +LS + E PFTYLA LS K A  KD    V+GRIKCFLTG
Sbjct: 459 DSGGVAAEFSNMVVDLEGPSVLSTNTEKPFTYLAELSQKWAVMKDTIHFVQGRIKCFLTG 518

Query: 521 VKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSA- 580
           VK FQFK+++ YEL  YVDDGSLI E+L+ ++VVQK IGHS  +VT A+ SS    ++A 
Sbjct: 519 VKKFQFKQQSTYELLCYVDDGSLICEILLHNDVVQKRIGHSSMEVTAALSSSAPTSLNAM 578

Query: 581 MKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSN 587
           MKE L++FQ+FL +FEG M+VEMNR+S  PV +EM++GC  +DARLLL R+  S+
Sbjct: 579 MKEKLKRFQLFLADFEGIMVVEMNRSSQYPVAIEMNQGCSLTDARLLLDRIKSSS 630

[Close]
BLAST of CsaV3_1G000400 vs. Swiss-Prot
Match: sp|Q7XRV0|RMI1_ORYSJ (RecQ-mediated genome instability protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RMI1 PE=3 SV=2)

HSP 1 Score: 338.6 bits (867), Expect = 1.4e-91
Identity = 230/607 (37.89%), Postives = 308/607 (50.74%), Query Frame = 0 

Query: 102 VSDFLRGLGLSLKREWLDACIRSLQGSVPGFFSLNHSE-KGKLCFEQFLVSDMNYVGAGV 161
           V +FLRGLGL L+ EWL++C       VPGF+ L   E   + CFEQFL +DMN  GAGV
Sbjct: 209 VDEFLRGLGLRLRPEWLESC----AAGVPGFYGLGGVEAMARRCFEQFLFADMNACGAGV 268

Query: 162 LPENVDSMHLVDLPGPYVLQVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGM 221
           LPE V SMH   L GP VLQVDEIVN+S  L+ RY+ A A  KRCLKLSMTDG+QRI+GM
Sbjct: 269 LPEGVGSMHNAVLDGPLVLQVDEIVNLSAPLRERYRDAHAGPKRCLKLSMTDGIQRIYGM 328

Query: 222 EYRPIKNLEVLAPAGLKVVISNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNK 281
           EYRPIK+LEVLAPAG K+VI NV +RRGL MLVPE  E+LGG+ +EL+ AR RLV EVNK
Sbjct: 329 EYRPIKDLEVLAPAGFKIVIRNVHIRRGLFMLVPEVIEILGGVDDELDEARNRLVSEVNK 388

Query: 282 PPRGSRTRTGVVPSLASRATRAAWPSD----NVQEPG----------HPSRMVDAEPSHS 341
           PPRG R + G+   L+SRAT AAWP++    N  E G          HP+R+ +A  SH+
Sbjct: 389 PPRGKRKQGGL--PLSSRATLAAWPTNANATNDAEQGASVPRTVNTPHPTRLGNA--SHA 448

Query: 342 NQGARMFHRGNEAFTAPVADAFTTPVSRTNA----------------------NSELSSN 401
           +Q  R         T P+ D     V  +NA                      N E S++
Sbjct: 449 SQVGRT--------TQPMVDNLIPHVVVSNAQEQSRHIQEITMQGQPTSLNRHNKEASAS 508

Query: 402 F---------------------VSNVEEIHSH----------SIPSGR------------ 461
           +                     VSN +E   H          +  +GR            
Sbjct: 509 YRYNAQCSISGTTRAMADEHVLVSNAQEQSPHIQEITMQDQSTSLNGRNKEASASTSYRY 568

Query: 462 ---------------AHTEPTIVPNSV-------------------------------XX 521
                             +P+ V N+V                                 
Sbjct: 569 NAQCSISGTTRAMADERVDPSFVGNNVHEQMQRVQGITMQDHISASSESKRELSVTTPSG 628

Query: 522 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAA 581
                                           I HP+ L G+ E PFTY+ ++ A     
Sbjct: 629 YDSRLAPHGVGNTGTRSGEATRSSNVDDGINNIGHPISLCGENEKPFTYIFNMLADWGVQ 688

Query: 582 KDKSPLVRGRIKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPK 583
           +D  P ++G+IK  +T VK FQ+K+   Y+L VY+DDGS I+E  +D ++VQ  IG S +
Sbjct: 689 QDTVPYIQGKIKGLITSVKRFQYKQSMQYDLYVYIDDGSFITEAFVDRDIVQNMIGLSAE 748

[Close]
BLAST of CsaV3_1G000400 vs. Swiss-Prot
Match: sp|Q9H9A7|RMI1_HUMAN (RecQ-mediated genome instability protein 1 OS=Homo sapiens OX=9606 GN=RMI1 PE=1 SV=3)

HSP 1 Score: 87.0 bits (214), Expect = 7.6e-16
Identity = 70/223 (31.39%), Postives = 108/223 (48.43%), Query Frame = 0 

Query: 117 WLDACIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGP 176
           WL+ACI  +Q       +L+ ++  K  FEQ+L++D+  +   +LP+ +  +   +L G 
Sbjct: 26  WLEACINWIQ-EENNNVNLSQAQMNKQVFEQWLLTDLRDLEHPLLPDGILEIPKGELNGF 85

Query: 177 YVLQVDEIVNISCALKGRYQ------------TAPANI---------KRCLKLSMTDGVQ 236
           Y LQ++ +V++S     + Q            TA A +          R L L +TDG+ 
Sbjct: 86  YALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEAQVTPKPWEAKPSRMLMLQLTDGIV 145

Query: 237 RIFGMEYRPIKNLEVLAPAGLKVVI-SNVSVRRGLLMLVPEAFEVLGGLVEEL------E 296
           +I GMEY+PI  L    P G K++I  N+S R G+L+L PE  +VLGG V+ L      E
Sbjct: 146 QIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVLLLKPENVKVLGGEVDALLEEYAQE 205

Query: 297 AARKRLVDE----VNKPPRGSRTRTGVVPSLASRATRAAWPSD 308
               RL+ E    V+  P  S      +P +      A  PSD
Sbjct: 206 KVLARLIGEPDLVVSVIPNNSNEN---IPRVTDVLDPALGPSD 244

[Close]
BLAST of CsaV3_1G000400 vs. Swiss-Prot
Match: sp|Q6DDH2|RMI1_XENLA (RecQ-mediated genome instability protein 1 OS=Xenopus laevis OX=8355 GN=rmi1 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 9.9e-16
Identity = 64/175 (36.57%), Postives = 87/175 (49.71%), Query Frame = 0 

Query: 117 WLDACIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGP 176
           WL+ACI  +Q       SL  +E  K  FEQ+L++D+  +   VLP N+      +L G 
Sbjct: 27  WLEACINWIQEE--NGSSLLQAEINKQVFEQWLLTDLRDLEFPVLPANITDSLKCELNGF 86

Query: 177 YVLQVDEIVNISC-------ALKGRYQTA--------------PANIKRCLKLSMTDGVQ 236
           + +Q+D +V+IS         LKG+  T                A   R L L +TDG Q
Sbjct: 87  HAVQMDSLVDISLPAYSQLQKLKGKDSTNEQVTCTTQQSQKPWEAKPTRMLMLQLTDGTQ 146

Query: 237 RIFGMEYRPIKNLEVLAPAGLKVVISNVSV-RRGLLMLVPEAFEVLGGLVEELEA 270
            I  MEYRPI+ L      G K+V+    V R G+L+L PE  +VLGG VE L A
Sbjct: 147 HIQAMEYRPIQALNANLSPGTKMVLQGTIVCRLGVLLLKPENVKVLGGEVEALVA 199

[Close]
BLAST of CsaV3_1G000400 vs. Swiss-Prot
Match: sp|Q5ZHV8|RMI1_CHICK (RecQ-mediated genome instability protein 1 OS=Gallus gallus OX=9031 GN=RMI1 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.8e-15
Identity = 65/220 (29.55%), Postives = 104/220 (47.27%), Query Frame = 0 

Query: 117 WLDACIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGP 176
           WL+ACI  +Q    G  +L+ ++  +  FEQ+L++D+  +   +LP+ +      +L G 
Sbjct: 26  WLEACINWIQ-EENGGGNLSQAQISRQVFEQWLLTDLRDLEYPILPDGILDAPKGELSGF 85

Query: 177 YVLQVDEIVNISCALKGRYQ------------TA---------PANIKRCLKLSMTDGVQ 236
           Y LQ+D ++++S     + Q            TA          A   R L L +TDG+ 
Sbjct: 86  YSLQIDSLLDVSQPAYSQLQKIRGKSTVNEEVTANTQAFQKPWEAKPTRMLMLQLTDGIH 145

Query: 237 RIFGMEYRPIKNLEVLAPAGLKVVI-SNVSVRRGLLMLVPEAFEVLGGLVEEL------E 296
           +I GMEY+P+  L    P G K+ +  NV+ R G+L+L PE  ++LGG V+ L      E
Sbjct: 146 QIQGMEYQPVPVLHSNLPPGTKITVHGNVAYRLGVLLLKPENVKLLGGEVDALLEEYSQE 205

Query: 297 AARKRLVDEVNKPPRGSRT-RTGVVPSLASRATRAAWPSD 308
               RL+ E   P    +     +VP       +   PSD
Sbjct: 206 RVLARLLGEAENPDSVRQPGHEQIVPGPVDELGQTLGPSD 244

[Close]
BLAST of CsaV3_1G000400 vs. TrEMBL
Match: tr|A0A0A0LNV2|A0A0A0LNV2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001400 PE=4 SV=1)

HSP 1 Score: 1061.2 bits (2743), Expect = 8.5e-307
Identity = 601/601 (100.00%), Postives = 601/601 (100.00%), Query Frame = 0 

Query: 1   MTRRRLRLSWSSDEDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ 60
           MTRRRLRLSWSSDEDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ
Sbjct: 1   MTRRRLRLSWSSDEDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ 60

Query: 61  HFIDVSDHLSPPSPDXXXXXXXXXXXXXXXXXXXXTHPPCPVSDFLRGLGLSLKREWLDA 120
           HFIDVSDHLSPPSPDXXXXXXXXXXXXXXXXXXXXTHPPCPVSDFLRGLGLSLKREWLDA
Sbjct: 61  HFIDVSDHLSPPSPDXXXXXXXXXXXXXXXXXXXXTHPPCPVSDFLRGLGLSLKREWLDA 120

Query: 121 CIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGPYVLQ 180
           CIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGPYVLQ
Sbjct: 121 CIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGPYVLQ 180

Query: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAGLKVVI 240
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAGLKVVI 240

Query: 241 SNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSLASRAT 300
           SNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSLASRAT
Sbjct: 241 SNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSLASRAT 300

Query: 301 RAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRTNANSE 360
           RAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRTNANSE
Sbjct: 301 RAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRTNANSE 360

Query: 361 LSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           LSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 LSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKGFQFKR 480
           XXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKGFQFKR
Sbjct: 421 XXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKGFQFKR 480

Query: 481 RTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKETLRQFQ 540
           RTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKETLRQFQ
Sbjct: 481 RTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKETLRQFQ 540

Query: 541 IFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHARIIDVS 600
           IFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHARIIDVS
Sbjct: 541 IFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHARIIDVS 600

Query: 601 P 602
           P
Sbjct: 601 P 601

[Close]
BLAST of CsaV3_1G000400 vs. TrEMBL
Match: tr|A0A1S3CLI7|A0A1S3CLI7_CUCME (recQ-mediated genome instability protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502304 PE=4 SV=1)

HSP 1 Score: 990.3 bits (2559), Expect = 1.8e-285
Identity = 564/601 (93.84%), Postives = 578/601 (96.17%), Query Frame = 0 

Query: 1   MTRRRLRLSWSSDEDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ 60
           MTRRRLRLS SSDEDLEQDSHC DSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ
Sbjct: 1   MTRRRLRLSSSSDEDLEQDSHCLDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ 60

Query: 61  HFIDVSDHLSPPSPDXXXXXXXXXXXXXXXXXXXXTHPPCPVSDFLRGLGLSLKREWLDA 120
           HFIDVSDHLSPPSPDXXXXXXXXXXXXXXXX    THPPCPVSDFLRGLGLSLKREWL A
Sbjct: 61  HFIDVSDHLSPPSPDXXXXXXXXXXXXXXXXGLASTHPPCPVSDFLRGLGLSLKREWLGA 120

Query: 121 CIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGPYVLQ 180
           CIRSLQ SVPGFFSLNHS KGKLCFEQFLVSDMNY GAGVLPENVDSMHLVDLPGPYVLQ
Sbjct: 121 CIRSLQESVPGFFSLNHSAKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLPGPYVLQ 180

Query: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAGLKVVI 240
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQR+FGMEYRPIK+LEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240

Query: 241 SNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSLASRAT 300
           S+VSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRG RTRTGVVPSLASRAT
Sbjct: 241 SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 300

Query: 301 RAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRTNANSE 360
            AAWPSDNVQEPGH SRMVDAEPS S+QGAR+FHRGNEAF+APVADAFTTPVSRTNANSE
Sbjct: 301 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 360

Query: 361 LSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           LSSNFVSNVEEI SHSIPSGRA  EPTIVPN  XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKGFQFKR 480
           XXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAK+K P VRGRIKCFLTGVKGFQFK+
Sbjct: 421 XXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 480

Query: 481 RTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKETLRQFQ 540
           RT YELRV+VDDGSLISEVLID+EVVQKAIGHSPKDVTDA+DSSDVKVVSAMKETLRQFQ
Sbjct: 481 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 540

Query: 541 IFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHARIIDVS 600
           IFLINFEGTMLVEMN+TS LPVVLEM+EGCLESDARLLLRRLACSN+VPTDEHARIIDVS
Sbjct: 541 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARIIDVS 600

Query: 601 P 602
           P
Sbjct: 601 P 601

[Close]
BLAST of CsaV3_1G000400 vs. TrEMBL
Match: tr|A0A1S3CLE1|A0A1S3CLE1_CUCME (recQ-mediated genome instability protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502304 PE=4 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 9.7e-194
Identity = 394/421 (93.59%), Postives = 408/421 (96.91%), Query Frame = 0 

Query: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAGLKVVI 240
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQR+FGMEYRPIK+LEVLAPAGLKVVI
Sbjct: 21  VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 80

Query: 241 SNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSLASRAT 300
           S+VSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRG RTRTGVVPSLASRAT
Sbjct: 81  SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 140

Query: 301 RAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRTNANSE 360
            AAWPSDNVQEPGH SRMVDAEPS S+QGAR+FHRGNEAF+APVADAFTTPVSRTNANSE
Sbjct: 141 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 200

Query: 361 LSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           LSSNFVSNVEEI SHSIPSGRA  EPTIVPN  XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 201 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 260

Query: 421 XXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKGFQFKR 480
           XXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAK+K P VRGRIKCFLTGVKGFQFK+
Sbjct: 261 XXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 320

Query: 481 RTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKETLRQFQ 540
           RT YELRV+VDDGSLISEVLID+EVVQKAIGHSPKDVTDA+DSSDVKVVSAMKETLRQFQ
Sbjct: 321 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 380

Query: 541 IFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHARIIDVS 600
           IFLINFEGTMLVEMN+TS LPVVLEM+EGCLESDARLLLRRLACSN+VPTDEHARIIDVS
Sbjct: 381 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARIIDVS 440

Query: 601 P 602
           P
Sbjct: 441 P 441

[Close]
BLAST of CsaV3_1G000400 vs. TrEMBL
Match: tr|A0A1Q3CPV3|A0A1Q3CPV3_CEPFO (DUF1767 domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_25709 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 1.4e-160
Identity = 368/627 (58.69%), Postives = 431/627 (68.74%), Query Frame = 0 

Query: 1   MTRRRLRLSWSSDEDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSDDDEQ 60
           M RRRLRLS+SSDE+        D      Q +      +H NP  S PV VP SDDD  
Sbjct: 1   MLRRRLRLSYSSDEE--------DQMENQHQSL------THQNPTHSLPVTVPISDDD-- 60

Query: 61  HFIDVSDHLSPPSPDXXXXXXXXXXXXXXXXXXXXTHPPCPVSDFLRGLGLSLKREWLDA 120
            FI+VSD L+PPSP                           + +FL  +GL LKREWLD+
Sbjct: 61  -FIEVSDTLTPPSPPENLADTL-------------------IGEFLGRVGLRLKREWLDS 120

Query: 121 CIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGPYVLQ 180
           C+  LQ SVPGF + +   K KLCFEQFL SDMNY GAGVLP+NVDSMHLVDL GP+VLQ
Sbjct: 121 CVEGLQRSVPGFSAFDSETKAKLCFEQFLFSDMNYSGAGVLPQNVDSMHLVDLKGPFVLQ 180

Query: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAGLKVVI 240
           VDEIVNISC L+GRYQ AP+ IKRCLKLSMTDG+QR+FGMEYRPIK+L+VLAPAGLKV I
Sbjct: 181 VDEIVNISCPLRGRYQDAPSGIKRCLKLSMTDGIQRVFGMEYRPIKDLKVLAPAGLKVAI 240

Query: 241 SNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSLASRAT 300
            NV +R GLLMLVPEAFEVL G+VEELEAAR+RLV+E+ KPPRG RTRT  VPSLA+RAT
Sbjct: 241 CNVHIRHGLLMLVPEAFEVLEGMVEELEAARQRLVNELAKPPRGKRTRTAAVPSLATRAT 300

Query: 301 RAAWPSD--NVQEPGHPSRMVDAEPSHSNQ---------GARMFH--RGNEAFTAP---- 360
            AAWP +  +VQE  + S + D  P H+++           R FH      AF  P    
Sbjct: 301 LAAWPVNGIDVQEQSNNSTLQDTTPFHADEQGCTDYIVKSQRFFHLCAAAAAFVTPHTCN 360

Query: 361 ---VADAFTTPVSRTNANSELSSNFVSNVEEIHSHSI----PSGRAHTEPTIVPNSVXXX 420
              + +   T + + +A  + SSN V  V+E+H  S+                    XXX
Sbjct: 361 SQRIMEESVTSIYQEDAVPDPSSNVVPEVQEMHIDSVXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAK 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXX    +EH  ILSGDREIPFTY+ASLSAK AA K
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXMVDEVEHLHILSGDREIPFTYMASLSAKWAAMK 480

Query: 481 DKSPLVRGRIKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKD 540
           +K+P V G+IKCFLTGVKGF++K+R  YELRVYVDDGSLISE+LIDH VV K IGHSP++
Sbjct: 481 EKAPSVLGKIKCFLTGVKGFRYKQRATYELRVYVDDGSLISEILIDHHVVHKGIGHSPEE 540

Query: 541 VTDAIDSSDVKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDAR 600
           VT A+ SSD+KVVS MKE LRQFQIFL+NFEGT+LVEMN+TS LPV LEMS+GC  SDA 
Sbjct: 541 VTAALASSDIKVVSNMKEALRQFQIFLVNFEGTVLVEMNQTSHLPVALEMSQGCPASDAW 591

Query: 601 LLLRRLACSNSVPTDEHARI--IDVSP 602
           LLLRRL  S    T +H R   I++SP
Sbjct: 601 LLLRRLKSSAPAQTPQHPRFDPIEISP 591

[Close]
BLAST of CsaV3_1G000400 vs. TrEMBL
Match: tr|A0A061FZP6|A0A061FZP6_THECC (Domain of Uncharacterized protein function, putative OS=Theobroma cacao OX=3641 GN=TCM_014687 PE=4 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 1.4e-155
Identity = 320/609 (52.55%), Postives = 393/609 (64.53%), Query Frame = 0 

Query: 1   MTRRRLRLSWSSDEDLEQDSHCP----DSSPTSLQPIILDNLNSHFNPNVSEPVQVPDSD 60
           M RRRLRL  S                +SS  + QPI L    S  NPN +EP  +P SD
Sbjct: 1   MPRRRLRLHCSXXXXXXXXXXXXEPPLESSAVTHQPITL----SLPNPNPAEP--LPISD 60

Query: 61  DDEQHFIDVSDHLSPPSPDXXXXXXXXXXXXXXXXXXXXTHPPCPVSDFLRGLGLSLKRE 120
           D+   F+DV D  +PPS                           P+ D L  +GL L+RE
Sbjct: 61  DE---FVDVYDSFTPPS------SPPPEASETAAPVTSVESSDSPIGDLLLRMGLKLRRE 120

Query: 121 WLDACIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDLPGP 180
           WLD+C++ LQ SVP F +L+ S K KLCF+QFL SDMNY G G+LPENVDSMHLVDL GP
Sbjct: 121 WLDSCVQGLQSSVPRFSTLDVSAKAKLCFQQFLFSDMNYSGGGILPENVDSMHLVDLKGP 180

Query: 181 YVLQVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAGL 240
           +VLQVDEIVNISC LKGRYQ AP  IKRCLKLSMTDGVQR+FGMEYRPIK+L+VLAPAGL
Sbjct: 181 FVLQVDEIVNISCPLKGRYQDAPPGIKRCLKLSMTDGVQRVFGMEYRPIKDLQVLAPAGL 240

Query: 241 KVVISNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSLA 300
           KV I N+ +RRGLL+LVPE+ EVLGG+VE+LEAAR+RLV+EVNKPPRG R++TGVVP LA
Sbjct: 241 KVAICNIHIRRGLLVLVPESLEVLGGVVEDLEAARQRLVNEVNKPPRGKRSKTGVVPPLA 300

Query: 301 SRATRAAWPSD--NVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSR 360
           +RAT AAWP +  N  EP +      A P  +++        +   T    +  T  +  
Sbjct: 301 TRATLAAWPLNGVNAVEPTNNLTSQSAAPFQADERGATLDLSSTVTTQRTVEKPTAHIGG 360

Query: 361 TNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVXXXXXXXXXXXXXXXXXXXXX 420
            NA    SS+ V +VE +   ++P  R +    + P++                      
Sbjct: 361 VNAVPNSSSDVVLDVERMQIDNVPISRENEVSNLNPDTA--------------------- 420

Query: 421 XXXXXXXXXXXXXIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVK 480
                        +EHPLILSGDRE+PFTYLASLSAK AA KDK+  V+G+IKCFLTGVK
Sbjct: 421 --PDVEHIHMADVVEHPLILSGDREVPFTYLASLSAKWAAIKDKATYVQGKIKCFLTGVK 480

Query: 481 GFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKE 540
            FQ+K+RT YEL  YVDDGSLISE+LIDH VVQK IGHSP++VT A+ SSD ++VS MKE
Sbjct: 481 SFQYKQRTTYELLCYVDDGSLISEILIDHNVVQKGIGHSPQEVTAALSSSDKQIVSGMKE 540

Query: 541 TLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHA 600
            +RQFQ FL +FEG ML+E+N+ S LP+ +EM++GC  SDARLLLRRL  S S  T EH 
Sbjct: 541 IMRQFQTFLAHFEGMMLIEINKKSSLPIAIEMTQGCPASDARLLLRRLEPSASSQTPEHL 571

Query: 601 RI--IDVSP 602
            +  ID+SP
Sbjct: 601 PLDPIDISP 571

The following BLAST results are available for this feature:
BLAST of CsaV3_1G000400 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138254.11.3e-306100.00PREDICTED: recQ-mediated genome instability protein 1 isoform X1 [Cucumis sativu... [more]
XP_008464406.12.8e-28593.84PREDICTED: recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo][more]
XP_023515609.13.9e-24778.95recQ-mediated genome instability protein 1 [Cucurbita pepo subsp. pepo][more]
XP_022921986.15.2e-24778.95recQ-mediated genome instability protein 1 [Cucurbita moschata][more]
XP_022988244.17.0e-24478.13recQ-mediated genome instability protein 1 [Cucurbita maxima][more]
BLAST of CsaV3_1G000400 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G63540.22.9e-11144.37Domain of unknown function (DUF1767)[more]
BLAST of CsaV3_1G000400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q5XUX6|RMI1_ARATH8.4e-11647.29RecQ-mediated genome instability protein 1 OS=Arabidopsis thaliana OX=3702 GN=RM... [more]
sp|Q7XRV0|RMI1_ORYSJ1.4e-9137.89RecQ-mediated genome instability protein 1 OS=Oryza sativa subsp. japonica OX=39... [more]
sp|Q9H9A7|RMI1_HUMAN7.6e-1631.39RecQ-mediated genome instability protein 1 OS=Homo sapiens OX=9606 GN=RMI1 PE=1 ... [more]
sp|Q6DDH2|RMI1_XENLA9.9e-1636.57RecQ-mediated genome instability protein 1 OS=Xenopus laevis OX=8355 GN=rmi1 PE=... [more]
sp|Q5ZHV8|RMI1_CHICK3.8e-1529.55RecQ-mediated genome instability protein 1 OS=Gallus gallus OX=9031 GN=RMI1 PE=2... [more]
BLAST of CsaV3_1G000400 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LNV2|A0A0A0LNV2_CUCSA8.5e-307100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001400 PE=4 SV=1[more]
tr|A0A1S3CLI7|A0A1S3CLI7_CUCME1.8e-28593.84recQ-mediated genome instability protein 1 isoform X1 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A1S3CLE1|A0A1S3CLE1_CUCME9.7e-19493.59recQ-mediated genome instability protein 1 isoform X2 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A1Q3CPV3|A0A1Q3CPV3_CEPFO1.4e-16058.69DUF1767 domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 ... [more]
tr|A0A061FZP6|A0A061FZP6_THECC1.4e-15552.55Domain of Uncharacterized protein function, putative OS=Theobroma cacao OX=3641 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0031422RecQ helicase-Topo III complex
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR039215RMI1
IPR032199RMI1_C
IPR013894RMI1_N
IPR033472DUF1767
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0044699 single-organism process
biological_process GO:0009987 cellular process
cellular_component GO:0031422 RecQ helicase-Topo III complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G000400.1CsaV3_1G000400.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033472RecQ mediated genome instability protein, DUF1767SMARTSM01161DUF1767_2coord: 103..196
e-value: 1.3E-27
score: 107.8
IPR013894RecQ mediated genome instability protein, N-terminalPFAMPF08585RMI1_Ncoord: 110..272
e-value: 5.4E-37
score: 127.5
IPR032199Recq-mediated genome instability protein 1, C-terminal OB-fold domainPFAMPF16099RMI1_Ccoord: 441..582
e-value: 5.6E-36
score: 123.4
NoneNo IPR availableGENE3DG3DSA:2.40.50.770coord: 192..278
e-value: 5.4E-22
score: 79.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..328
NoneNo IPR availablePANTHERPTHR14790:SF15RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1coord: 99..340
coord: 354..582
IPR039215RecQ-mediated genome instability protein 1PANTHERPTHR14790FAMILY NOT NAMEDcoord: 99..340
coord: 354..582

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G000400CSPI01G00380Wild cucumber (PI 183967)cpicucB001
CsaV3_1G000400Cucsa.157190Cucumber (Gy14) v1cgycucB236
CsaV3_1G000400CmaCh10G000480Cucurbita maxima (Rimu)cmacucB0058
CsaV3_1G000400CmoCh10G000430Cucurbita moschata (Rifu)cmocucB0044
CsaV3_1G000400CsGy1G000400Cucumber (Gy14) v2cgybcucB002
CsaV3_1G000400Carg10269Silver-seed gourdcarcucB0395
CsaV3_1G000400Cla019291Watermelon (97103) v1cucwmB105
CsaV3_1G000400MELO3C026191Melon (DHL92) v3.5.1cucmeB053
CsaV3_1G000400ClCG06G018070Watermelon (Charleston Gray)cucwcgB088
CsaV3_1G000400MELO3C026191.2Melon (DHL92) v3.6.1cucmedB050
CsaV3_1G000400Cla97C06G127810Watermelon (97103) v2cucwmbB076
CsaV3_1G000400Bhi02G000502Wax gourdcucwgoB087
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G000400Silver-seed gourdcarcucB0466
CsaV3_1G000400Silver-seed gourdcarcucB0643
CsaV3_1G000400Cucumber (Gy14) v2cgybcucB010
CsaV3_1G000400Cucumber (Gy14) v2cgybcucB101
CsaV3_1G000400Cucurbita maxima (Rimu)cmacucB0100
CsaV3_1G000400Cucurbita maxima (Rimu)cmacucB0117
CsaV3_1G000400Cucurbita maxima (Rimu)cmacucB0256
CsaV3_1G000400Cucurbita maxima (Rimu)cmacucB0273
CsaV3_1G000400Cucurbita maxima (Rimu)cmacucB0472
CsaV3_1G000400Cucurbita moschata (Rifu)cmocucB0243
CsaV3_1G000400Cucurbita moschata (Rifu)cmocucB0091
CsaV3_1G000400Cucurbita moschata (Rifu)cmocucB0094
CsaV3_1G000400Cucurbita moschata (Rifu)cmocucB0261
CsaV3_1G000400Cucurbita moschata (Rifu)cmocucB0470
CsaV3_1G000400Cucurbita pepo (Zucchini)cpecucB0029
CsaV3_1G000400Cucurbita pepo (Zucchini)cpecucB0442
CsaV3_1G000400Cucurbita pepo (Zucchini)cpecucB0630
CsaV3_1G000400Cucurbita pepo (Zucchini)cpecucB0739
CsaV3_1G000400Cucurbita pepo (Zucchini)cpecucB0804
CsaV3_1G000400Cucurbita pepo (Zucchini)cpecucB0814
CsaV3_1G000400Wild cucumber (PI 183967)cpicucB014
CsaV3_1G000400Wild cucumber (PI 183967)cpicucB126
CsaV3_1G000400Bottle gourd (USVL1VR-Ls)cuclsiB039
CsaV3_1G000400Bottle gourd (USVL1VR-Ls)cuclsiB081
CsaV3_1G000400Melon (DHL92) v3.5.1cucmeB019
CsaV3_1G000400Melon (DHL92) v3.5.1cucmeB084
CsaV3_1G000400Melon (DHL92) v3.6.1cucmedB017
CsaV3_1G000400Melon (DHL92) v3.6.1cucmedB077
CsaV3_1G000400Watermelon (Charleston Gray)cucwcgB056
CsaV3_1G000400Watermelon (Charleston Gray)cucwcgB072
CsaV3_1G000400Watermelon (97103) v1cucwmB032
CsaV3_1G000400Watermelon (97103) v2cucwmbB048
CsaV3_1G000400Wax gourdcucwgoB015
CsaV3_1G000400Wax gourdcucwgoB062
CsaV3_1G000400Cucumber (Chinese Long) v3cuccucB003
CsaV3_1G000400Cucumber (Chinese Long) v3cuccucB017