CsaUNG008830 (gene) Cucumber (Chinese Long) v2

Overview
NameCsaUNG008830
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPutative receptor-like protein kinase; contains IPR011009 (Protein kinase-like domain)
LocationScaffold000122 : 202187 .. 202808 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGTTAACCATAGAAACTTGAACAGTCTTGTTGGATATTTGAATGAAGAAAACCATATTGGCCTCATTTACGAGTACATGGCAAATGGAGATTTGGCCGAACATCTTTCAGGTAAACCCAATGGTGATAAGTTTCACATTATTACTTAGAAGATTAGTCTAAATTTGAATGTAATTGATGAGTTTTAAGAGTTTAATTCTTGTTTTATGTATTGAAATCATCTCTAGCAATGGAAACTATGAATCCAGTGTTTACTTTTGTTGTTAAGAGTACCTCTTATCTTTTGGTTTGATTCAAGGATAAGCTTCAGATGTATAGAAATTAATGATGATACATGATACATGATACATGATCTTGCTCTTACCTTCTTATCTTTTGGTTTGATTCAAGGCTGTTGTAGTCTATATTTTGTGAAAAACTGGCATTTCTTTCAAACTTTCATACAAATATTTGTTTTAAATCACTTCTGTAGACTGGAGAATATGAAGAAACCATAGGCACGTGTCTTACTCTGAAGTCATGTTTTCTAATGTAGAGGAAGTCCATGTGGTTGAAGAAGATCAACCATCTGAAACAAATCGTTGCTCAAGAGAAGCAGTTGAACCAAAAAGGAGTTGA

mRNA sequence

ATGAGAGTTAACCATAGAAACTTGAACAGTCTTGTTGGATATTTGAATGAAGAAAACCATATTGGCCTCATTTACGAGTACATGGCAAATGGAGATTTGGCCGAACATCTTTCAGAGGAAGTCCATGTGGTTGAAGAAGATCAACCATCTGAAACAAATCGTTGCTCAAGAGAAGCAGTTGAACCAAAAAGGAGTTGA

Coding sequence (CDS)

ATGAGAGTTAACCATAGAAACTTGAACAGTCTTGTTGGATATTTGAATGAAGAAAACCATATTGGCCTCATTTACGAGTACATGGCAAATGGAGATTTGGCCGAACATCTTTCAGAGGAAGTCCATGTGGTTGAAGAAGATCAACCATCTGAAACAAATCGTTGCTCAAGAGAAGCAGTTGAACCAAAAAGGAGTTGA

Protein sequence

MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLSEEVHVVEEDQPSETNRCSREAVEPKRS*
Homology
[Close]
BLAST of CsaUNG008830 vs. Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 6.9e-08
Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLS 39
           +RV+H NL SLVGY +E+ H+ LIYEYMANGDL  HLS
Sbjct: 622 LRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHLS 659

[Close]
BLAST of CsaUNG008830 vs. Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.2e-07
Identity = 26/38 (68.42%), Postives = 28/38 (73.68%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLS 39
           MRV+H NL SLVGY +E  H+ LIYEYM NGDL +HLS
Sbjct: 626 MRVHHINLVSLVGYCDEGEHLALIYEYMPNGDLKQHLS 663

[Close]
BLAST of CsaUNG008830 vs. Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.0e-07
Identity = 24/38 (63.16%), Postives = 30/38 (78.95%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLS 39
           +RV+H NL +LVGY +E++H  LIYEYM+NGDL +HLS
Sbjct: 615 LRVHHINLVNLVGYCDEQDHFALIYEYMSNGDLHQHLS 652

[Close]
BLAST of CsaUNG008830 vs. Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.0e-07
Identity = 24/38 (63.16%), Postives = 30/38 (78.95%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLS 39
           +RV+H+NL  LVGY +E +++ LIYEYMANGDL EH+S
Sbjct: 627 LRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMS 664

[Close]
BLAST of CsaUNG008830 vs. Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.6e-07
Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLS 39
           +RV+H+NL  LVGY +E  ++ LIYEYMANGDL EH+S
Sbjct: 641 LRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMS 678

[Close]
BLAST of CsaUNG008830 vs. TrEMBL
Match: A0A0A0K792_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452200 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.5e-12
Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLSE 40
           MRV+HRNL SLVGYLNEENH+GLIYEYMANGDLAEHLSE
Sbjct: 633 MRVHHRNLTSLVGYLNEENHLGLIYEYMANGDLAEHLSE 671

[Close]
BLAST of CsaUNG008830 vs. TrEMBL
Match: A0A0A0KCS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452210 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-09
Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLSEE 41
           +R +H+NL SLVGYLNE NHIGLIYE+MANG+LAEHLSE+
Sbjct: 515 LRAHHKNLTSLVGYLNEGNHIGLIYEFMANGNLAEHLSEK 554

[Close]
BLAST of CsaUNG008830 vs. TrEMBL
Match: A0A0A0K7Y5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452180 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.5e-09
Identity = 30/40 (75.00%), Postives = 37/40 (92.50%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLSEE 41
           MRV+HRNL +LVGY+N+E H+GLIYEYMA G+LAEHLSE+
Sbjct: 636 MRVHHRNLTNLVGYMNDEGHLGLIYEYMAKGNLAEHLSEK 675

[Close]
BLAST of CsaUNG008830 vs. TrEMBL
Match: A0A0A0KCS2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452160 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 7.5e-09
Identity = 29/38 (76.32%), Postives = 35/38 (92.11%), Query Frame = 1 

Query: 1  MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLS 39
          MRV+HRNL +LVGY+N+E H+GLIYEYMA G+LAEHLS
Sbjct: 19 MRVHHRNLTNLVGYMNDEGHLGLIYEYMAKGNLAEHLS 56

[Close]
BLAST of CsaUNG008830 vs. TrEMBL
Match: A0A0A0K9P9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452140 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.7e-08
Identity = 28/38 (73.68%), Postives = 35/38 (92.11%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLS 39
           MRV+HRNL +LVGY+N+ +H+GLIYEYMA G+LAEHLS
Sbjct: 595 MRVHHRNLTNLVGYMNDGDHLGLIYEYMARGNLAEHLS 632

[Close]
BLAST of CsaUNG008830 vs. TAIR10
Match: AT4G29990.1 (AT4G29990.1 Leucine-rich repeat transmembrane protein kinase protein)

HSP 1 Score: 61.6 bits (148), Expect = 2.1e-10
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLS 39
           MRV+H NL SL+GY NE+NH+ LIYEYMANG+L ++LS
Sbjct: 622 MRVHHTNLTSLIGYCNEDNHMALIYEYMANGNLGDYLS 659

[Close]
BLAST of CsaUNG008830 vs. TAIR10
Match: AT2G29000.1 (AT2G29000.1 Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 60.5 bits (145), Expect = 4.6e-10
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLSEE 41
           +RV+H NL +LVGY NEE+H+ L+YEY ANGDL +HLS E
Sbjct: 614 LRVHHTNLVNLVGYCNEEDHLALVYEYAANGDLKQHLSGE 653

[Close]
BLAST of CsaUNG008830 vs. TAIR10
Match: AT2G28970.1 (AT2G28970.1 Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-09
Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLS 39
           MRV+H+NL SLVGY +E +H+ LIYEYM NGDL +HLS
Sbjct: 528 MRVHHKNLVSLVGYCDEGDHLALIYEYMPNGDLKQHLS 565

[Close]
BLAST of CsaUNG008830 vs. TAIR10
Match: AT5G16900.1 (AT5G16900.1 Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 57.4 bits (137), Expect = 3.9e-09
Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLS 39
           +RV+H NL SLVGY +E+ H+ LIYEYMANGDL  HLS
Sbjct: 622 LRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHLS 659

[Close]
BLAST of CsaUNG008830 vs. TAIR10
Match: AT3G46400.1 (AT3G46400.1 Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 57.0 bits (136), Expect = 5.1e-09
Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLS 39
           +RV+H NL SLVGY +E++H+ LIYEYM NGDL +HLS
Sbjct: 625 LRVHHINLVSLVGYCDEKDHLALIYEYMPNGDLKDHLS 662

[Close]
BLAST of CsaUNG008830 vs. NCBI nr
Match: gi|659124864|ref|XP_008462386.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51860 [Cucumis melo])

HSP 1 Score: 79.7 bits (195), Expect = 2.1e-12
Identity = 37/39 (94.87%), Postives = 38/39 (97.44%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLSE 40
           MRV+HRNL SLVGYLNEENHIGLIYEYMANGDLAEHLSE
Sbjct: 633 MRVHHRNLTSLVGYLNEENHIGLIYEYMANGDLAEHLSE 671

[Close]
BLAST of CsaUNG008830 vs. NCBI nr
Match: gi|778729919|ref|XP_011659665.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51860 [Cucumis sativus])

HSP 1 Score: 79.0 bits (193), Expect = 3.6e-12
Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLSE 40
           MRV+HRNL SLVGYLNEENH+GLIYEYMANGDLAEHLSE
Sbjct: 633 MRVHHRNLTSLVGYLNEENHLGLIYEYMANGDLAEHLSE 671

[Close]
BLAST of CsaUNG008830 vs. NCBI nr
Match: gi|778729930|ref|XP_011659668.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51820 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 1.7e-09
Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLSEE 41
           +R +H+NL SLVGYLNE NHIGLIYE+MANG+LAEHLSE+
Sbjct: 371 LRAHHKNLTSLVGYLNEGNHIGLIYEFMANGNLAEHLSEK 410

[Close]
BLAST of CsaUNG008830 vs. NCBI nr
Match: gi|700190333|gb|KGN45566.1| (hypothetical protein Csa_7G452210 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 1.7e-09
Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLSEE 41
           +R +H+NL SLVGYLNE NHIGLIYE+MANG+LAEHLSE+
Sbjct: 515 LRAHHKNLTSLVGYLNEGNHIGLIYEFMANGNLAEHLSEK 554

[Close]
BLAST of CsaUNG008830 vs. NCBI nr
Match: gi|659125002|ref|XP_008462458.1| (PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210 [Cucumis melo])

HSP 1 Score: 69.7 bits (169), Expect = 2.2e-09
Identity = 30/40 (75.00%), Postives = 37/40 (92.50%), Query Frame = 1 

Query: 1   MRVNHRNLNSLVGYLNEENHIGLIYEYMANGDLAEHLSEE 41
           MRV+HRNL +LVGY+N+E H+GLIYEYMA G+LAEHLSE+
Sbjct: 616 MRVHHRNLTNLVGYMNDEGHLGLIYEYMAKGNLAEHLSEK 655

The following BLAST results are available for this feature:
BLAST of CsaUNG008830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y5169_ARATH6.9e-0868.42Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidop... [more]
Y2899_ARATH1.2e-0768.42Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidops... [more]
MEE39_ARATH2.0e-0763.16Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis ... [more]
Y5182_ARATH2.0e-0763.16Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidop... [more]
RLK6_ARATH2.6e-0763.16Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1... [more]
BLAST of CsaUNG008830 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K792_CUCSA2.5e-1292.31Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452200 PE=3 SV=1[more]
A0A0A0KCS6_CUCSA1.2e-0977.50Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452210 PE=3 SV=1[more]
A0A0A0K7Y5_CUCSA1.5e-0975.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452180 PE=3 SV=1[more]
A0A0A0KCS2_CUCSA7.5e-0976.32Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452160 PE=4 SV=1[more]
A0A0A0K9P9_CUCSA3.7e-0873.68Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452140 PE=4 SV=1[more]
BLAST of CsaUNG008830 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G29990.12.1e-1068.42 Leucine-rich repeat transmembrane protein kinase protein[more]
AT2G29000.14.6e-1065.00 Leucine-rich repeat protein kinase family protein[more]
AT2G28970.11.3e-0968.42 Leucine-rich repeat protein kinase family protein[more]
AT5G16900.13.9e-0968.42 Leucine-rich repeat protein kinase family protein[more]
AT3G46400.15.1e-0965.79 Leucine-rich repeat protein kinase family protein[more]
BLAST of CsaUNG008830 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659124864|ref|XP_008462386.1|2.1e-1294.87PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51860 ... [more]
gi|778729919|ref|XP_011659665.1|3.6e-1292.31PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51860 ... [more]
gi|778729930|ref|XP_011659668.1|1.7e-0977.50PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51820 ... [more]
gi|700190333|gb|KGN45566.1|1.7e-0977.50hypothetical protein Csa_7G452210 [Cucumis sativus][more]
gi|659125002|ref|XP_008462458.1|2.2e-0975.00PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210 [... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001245Ser-Thr/Tyr_kinase_cat_dom
IPR011009Kinase-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004714 transmembrane receptor protein tyrosine kinase activity
molecular_function GO:0004672 protein kinase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU174074cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaUNG008830.1CsaUNG008830.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU174074CU174074transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001245Serine-threonine/tyrosine-protein kinase catalytic domainPFAMPF07714Pkinase_Tyrcoord: 2..45
score: 6.
IPR011009Protein kinase-like domainunknownSSF56112Protein kinase-like (PK-like)coord: 2..41
score: 1.6
NoneNo IPR availableGENE3DG3DSA:3.30.200.20coord: 2..56
score: 2.
NoneNo IPR availablePANTHERPTHR27003FAMILY NOT NAMEDcoord: 1..40
score: 2.6
NoneNo IPR availablePANTHERPTHR27003:SF105LEUCINE-RICH REPEAT PROTEIN KINASE-RELATEDcoord: 1..40
score: 2.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaUNG008830CSPIUnG00030Wild cucumber (PI 183967)cpicuB359
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaUNG008830Wax gourdcuwgoB120
CsaUNG008830Cucurbita maxima (Rimu)cmacuB276
CsaUNG008830Cucurbita maxima (Rimu)cmacuB691
CsaUNG008830Cucurbita moschata (Rifu)cmocuB681
CsaUNG008830Melon (DHL92) v3.5.1cumeB084
CsaUNG008830Watermelon (Charleston Gray)cuwcgB090
CsaUNG008830Watermelon (97103) v1cuwmB099
CsaUNG008830Cucurbita pepo (Zucchini)cpecuB163
CsaUNG008830Cucurbita pepo (Zucchini)cpecuB383
CsaUNG008830Silver-seed gourdcarcuB0839
CsaUNG008830Bottle gourd (USVL1VR-Ls)culsiB086
CsaUNG008830Cucumber (Gy14) v2cgybcuB204
CsaUNG008830Melon (DHL92) v3.6.1cumedB079
CsaUNG008830Silver-seed gourdcarcuB0509
CsaUNG008830Watermelon (97103) v2cuwmbB092