Csa7G452970 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GACGCTGAAAATTAAAAATTGTGATATAAATAAAAATTGGGAGCTCCTCTGTTTTTGTTTATATGATACGACCAAAATGGACTGTGGAAGGAAAGGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGTGA ATGATACGACCAAAATGGACTGTGGAAGGAAAGGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGTGA ATGATACGACCAAAATGGACTGTGGAAGGAAAGGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGTGA MIRPKWTVEGKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKV*
BLAST of Csa7G452970 vs. Swiss-Prot
Match: NOP9_PODAN (Nucleolar protein 9 OS=Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) GN=NOP9 PE=3 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 8.0e-16 Identity = 39/73 (53.42%), Postives = 61/73 (83.56%), Query Frame = 1
BLAST of Csa7G452970 vs. Swiss-Prot
Match: GARP_PLAFF (Glutamic acid-rich protein OS=Plasmodium falciparum (isolate FC27 / Papua New Guinea) GN=GARP PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 2.6e-14 Identity = 37/76 (48.68%), Postives = 63/76 (82.89%), Query Frame = 1
HSP 2 Score: 68.2 bits (165), Expect = 4.5e-11 Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 1
HSP 3 Score: 49.3 bits (116), Expect = 2.2e-05 Identity = 24/50 (48.00%), Postives = 33/50 (66.00%), Query Frame = 1
BLAST of Csa7G452970 vs. Swiss-Prot
Match: PXR1_CANAL (Protein PXR1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PXR1 PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 5.7e-14 Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = 1
BLAST of Csa7G452970 vs. Swiss-Prot
Match: DBP3_PICGU (ATP-dependent RNA helicase DBP3 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=DBP3 PE=3 SV=2) HSP 1 Score: 76.3 bits (186), Expect = 1.7e-13 Identity = 34/57 (59.65%), Postives = 51/57 (89.47%), Query Frame = 1
HSP 2 Score: 75.9 bits (185), Expect = 2.2e-13 Identity = 36/64 (56.25%), Postives = 52/64 (81.25%), Query Frame = 1
HSP 3 Score: 75.5 bits (184), Expect = 2.8e-13 Identity = 35/64 (54.69%), Postives = 53/64 (82.81%), Query Frame = 1
BLAST of Csa7G452970 vs. Swiss-Prot
Match: YCF2_OENPA (Protein Ycf2 OS=Oenothera parviflora GN=ycf2-A PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 8.2e-13 Identity = 34/72 (47.22%), Postives = 56/72 (77.78%), Query Frame = 1
HSP 2 Score: 65.9 bits (159), Expect = 2.2e-10 Identity = 32/73 (43.84%), Postives = 53/73 (72.60%), Query Frame = 1
BLAST of Csa7G452970 vs. TrEMBL
Match: E2BL60_HARSA (Putative uncharacterized protein OS=Harpegnathos saltator GN=EAI_05327 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 8.3e-28 Identity = 65/72 (90.28%), Postives = 69/72 (95.83%), Query Frame = 1
BLAST of Csa7G452970 vs. TrEMBL
Match: A0A0A2VFX0_BEABA (Uncharacterized protein OS=Beauveria bassiana D1-5 GN=BBAD15_g7926 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 8.3e-28 Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 1
BLAST of Csa7G452970 vs. TrEMBL
Match: A0A0A2VFX0_BEABA (Uncharacterized protein OS=Beauveria bassiana D1-5 GN=BBAD15_g7926 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 1.2e-26 Identity = 66/77 (85.71%), Postives = 69/77 (89.61%), Query Frame = 1
HSP 2 Score: 130.2 bits (326), Expect = 1.1e-27 Identity = 66/73 (90.41%), Postives = 68/73 (93.15%), Query Frame = 1
BLAST of Csa7G452970 vs. TrEMBL
Match: A0A162IIM0_9HYPO (Histone H5 OS=Aschersonia aleyrodis RCEF 2490 GN=AAL_04903 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 2.4e-27 Identity = 64/73 (87.67%), Postives = 68/73 (93.15%), Query Frame = 1
BLAST of Csa7G452970 vs. TrEMBL
Match: A0A063C9F8_9HYPO (3' exoribonuclease OS=Ustilaginoidea virens GN=UV8b_1290 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 4.1e-27 Identity = 65/71 (91.55%), Postives = 67/71 (94.37%), Query Frame = 1
BLAST of Csa7G452970 vs. TAIR10
Match: AT5G60530.1 (AT5G60530.1 late embryogenesis abundant protein-related / LEA protein-related) HSP 1 Score: 69.3 bits (168), Expect = 1.1e-12 Identity = 32/66 (48.48%), Postives = 55/66 (83.33%), Query Frame = 1
HSP 2 Score: 67.4 bits (163), Expect = 4.3e-12 Identity = 34/76 (44.74%), Postives = 54/76 (71.05%), Query Frame = 1
HSP 3 Score: 50.8 bits (120), Expect = 4.2e-07 Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = 1
HSP 4 Score: 33.9 bits (76), Expect = 5.3e-02 Identity = 15/33 (45.45%), Postives = 26/33 (78.79%), Query Frame = 1
BLAST of Csa7G452970 vs. TAIR10
Match: AT3G57150.1 (AT3G57150.1 homologue of NAP57) HSP 1 Score: 67.4 bits (163), Expect = 4.3e-12 Identity = 42/95 (44.21%), Postives = 52/95 (54.74%), Query Frame = 1
HSP 2 Score: 51.6 bits (122), Expect = 2.5e-07 Identity = 24/53 (45.28%), Postives = 38/53 (71.70%), Query Frame = 1
BLAST of Csa7G452970 vs. TAIR10
Match: AT4G35940.1 (AT4G35940.1 unknown protein) HSP 1 Score: 61.2 bits (147), Expect = 3.1e-10 Identity = 25/67 (37.31%), Postives = 49/67 (73.13%), Query Frame = 1
BLAST of Csa7G452970 vs. TAIR10
Match: AT2G22100.1 (AT2G22100.1 RNA-binding (RRM/RBD/RNP motifs) family protein) HSP 1 Score: 61.2 bits (147), Expect = 3.1e-10 Identity = 26/65 (40.00%), Postives = 49/65 (75.38%), Query Frame = 1
BLAST of Csa7G452970 vs. TAIR10
Match: AT5G27120.1 (AT5G27120.1 NOP56-like pre RNA processing ribonucleoprotein) HSP 1 Score: 60.8 bits (146), Expect = 4.1e-10 Identity = 36/84 (42.86%), Postives = 49/84 (58.33%), Query Frame = 1
BLAST of Csa7G452970 vs. NCBI nr
Match: gi|701772129|gb|KGQ06756.1| (hypothetical protein BBAD15_g7926 [Beauveria bassiana D1-5]) HSP 1 Score: 130.6 bits (327), Expect = 1.2e-27 Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 1
BLAST of Csa7G452970 vs. NCBI nr
Match: gi|701772129|gb|KGQ06756.1| (hypothetical protein BBAD15_g7926 [Beauveria bassiana D1-5]) HSP 1 Score: 126.7 bits (317), Expect = 1.7e-26 Identity = 66/77 (85.71%), Postives = 69/77 (89.61%), Query Frame = 1
HSP 2 Score: 130.6 bits (327), Expect = 1.2e-27 Identity = 65/72 (90.28%), Postives = 69/72 (95.83%), Query Frame = 1
BLAST of Csa7G452970 vs. NCBI nr
Match: gi|307205113|gb|EFN83578.1| (hypothetical protein EAI_05327 [Harpegnathos saltator]) HSP 1 Score: 119.0 bits (297), Expect = 3.6e-24 Identity = 64/79 (81.01%), Postives = 65/79 (82.28%), Query Frame = 1
HSP 2 Score: 118.6 bits (296), Expect = 4.7e-24 Identity = 66/89 (74.16%), Postives = 69/89 (77.53%), Query Frame = 1
HSP 3 Score: 130.2 bits (326), Expect = 1.5e-27 Identity = 66/73 (90.41%), Postives = 68/73 (93.15%), Query Frame = 1
BLAST of Csa7G452970 vs. NCBI nr
Match: gi|632915219|gb|KDB14826.1| (putative nucleoside hydrolase [Ustilaginoidea virens]) HSP 1 Score: 128.6 bits (322), Expect = 4.5e-27 Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 1
BLAST of Csa7G452970 vs. NCBI nr
Match: gi|632918019|gb|KDB17472.1| (essential subunit of the histone deacetylase Rpd3S complex [Ustilaginoidea virens]) HSP 1 Score: 128.6 bits (322), Expect = 4.5e-27 Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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