Csa7G451990 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G451990
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr7 : 18878502 .. 18878952 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTAAAACGAAAAGAGAAAAAGGCTTTTGGGGATTCGAAGGCCAATTGTGATCATCCTTCATCCCATAACCCTTTTTACACATTTGGGTGGTGAAATTTCACAGTGAAAGAGCGTACCAGAAAAGGGAGAAAAAGGGGGTTTCTGAATGTGTGTGTTTTGGAGGGTGGATATCAGCCAGCTCGAAATTGAGACCGCAATCCGCAACCGACGAAGAACCAACAACTGTCAGTTTGAGAAATTTCAGCAGATTTTGCTCCGTCTGCATTCAAAACTTCTATTTCTGTTCACAACATTCCAATCATGGAGGACAACTCTTTCCATGATTAGATTGAAAGAAAAAAGAAATTCCAATCTCCCAATTCCTTCTTCTTCGCCTCTGTTTCTTCGTCAGTTTTCAATCCCCCCTTCGATGCAAGTTAAGCTTCTAACATTGTTAGAAACTTAG

mRNA sequence

ATGGCTTTAAAACGAAAAGAGAAAAAGGCTTTTGGGGATTCGAAGGCCAATTGTGATCATCCTTCATCCCATAACCCTTTTTACACATTTGGGGTGGATATCAGCCAGCTCGAAATTGAGACCGCAATCCGCAACCGACGAAGAACCAACAACTGTCAGTTTGAGAAATTTCAGCAGATTTTGCTCCGTCTGCATTCAAAACTTCTATTTCTGTTCACAACATTCCAATCATGGAGGACAACTCTTTCCATGATTAGATTGAAAGAAAAAAGAAATTCCAATCTCCCAATTCCTTCTTCTTCGCCTCTGTTTCTTCGTCAGTTTTCAATCCCCCCTTCGATGCAAGTTAAGCTTCTAACATTGTTAGAAACTTAG

Coding sequence (CDS)

ATGGCTTTAAAACGAAAAGAGAAAAAGGCTTTTGGGGATTCGAAGGCCAATTGTGATCATCCTTCATCCCATAACCCTTTTTACACATTTGGGGTGGATATCAGCCAGCTCGAAATTGAGACCGCAATCCGCAACCGACGAAGAACCAACAACTGTCAGTTTGAGAAATTTCAGCAGATTTTGCTCCGTCTGCATTCAAAACTTCTATTTCTGTTCACAACATTCCAATCATGGAGGACAACTCTTTCCATGATTAGATTGAAAGAAAAAAGAAATTCCAATCTCCCAATTCCTTCTTCTTCGCCTCTGTTTCTTCGTCAGTTTTCAATCCCCCCTTCGATGCAAGTTAAGCTTCTAACATTGTTAGAAACTTAG

Protein sequence

MALKRKEKKAFGDSKANCDHPSSHNPFYTFGVDISQLEIETAIRNRRRTNNCQFEKFQQILLRLHSKLLFLFTTFQSWRTTLSMIRLKEKRNSNLPIPSSSPLFLRQFSIPPSMQVKLLTLLET*

Homology

[Close]

BLAST of Csa7G451990 vs. TrEMBL
Match: A0A0A0K9N6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G451990 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-63
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1


Query: 1   MALKRKEKKAFGDSKANCDHPSSHNPFYTFGVDISQLEIETAIRNRRRTNNCQFEKFQQI 60
           MALKRKEKKAFGDSKANCDHPSSHNPFYTFGVDISQLEIETAIRNRRRTNNCQFEKFQQI
Sbjct: 1   MALKRKEKKAFGDSKANCDHPSSHNPFYTFGVDISQLEIETAIRNRRRTNNCQFEKFQQI 60

Query: 61  LLRLHSKLLFLFTTFQSWRTTLSMIRLKEKRNSNLPIPSSSPLFLRQFSIPPSMQVKLLT 120
           LLRLHSKLLFLFTTFQSWRTTLSMIRLKEKRNSNLPIPSSSPLFLRQFSIPPSMQVKLLT
Sbjct: 61  LLRLHSKLLFLFTTFQSWRTTLSMIRLKEKRNSNLPIPSSSPLFLRQFSIPPSMQVKLLT 120

Query: 121 LLET 125
           LLET
Sbjct: 121 LLET 124

[Close]

BLAST of Csa7G451990 vs. NCBI nr
Match: gi|700190311|gb|KGN45544.1| (hypothetical protein Csa_7G451990 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 1.7e-63
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1


Query: 1   MALKRKEKKAFGDSKANCDHPSSHNPFYTFGVDISQLEIETAIRNRRRTNNCQFEKFQQI 60
           MALKRKEKKAFGDSKANCDHPSSHNPFYTFGVDISQLEIETAIRNRRRTNNCQFEKFQQI
Sbjct: 1   MALKRKEKKAFGDSKANCDHPSSHNPFYTFGVDISQLEIETAIRNRRRTNNCQFEKFQQI 60

Query: 61  LLRLHSKLLFLFTTFQSWRTTLSMIRLKEKRNSNLPIPSSSPLFLRQFSIPPSMQVKLLT 120
           LLRLHSKLLFLFTTFQSWRTTLSMIRLKEKRNSNLPIPSSSPLFLRQFSIPPSMQVKLLT
Sbjct: 61  LLRLHSKLLFLFTTFQSWRTTLSMIRLKEKRNSNLPIPSSSPLFLRQFSIPPSMQVKLLT 120

Query: 121 LLET 125
           LLET
Sbjct: 121 LLET 124

The following BLAST results are available for this feature:

BLAST of Csa7G451990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9N6_CUCSA	1.2e-63	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G451990 PE=4 SV=1	[more]

BLAST of Csa7G451990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700190311\|gb\|KGN45544.1\|	1.7e-63	100.00	hypothetical protein Csa_7G451990 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa7G451990.1	Csa7G451990.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa7G451990	Watermelon (97103) v2	cuwmbB552
Csa7G451990	Watermelon (97103) v2	cuwmbB570
Csa7G451990	Wax gourd	cuwgoB656
Csa7G451990	Wax gourd	cuwgoB690
Csa7G451990	Wax gourd	cuwgoB701
Csa7G451990	Cucumber (Chinese Long) v2	cucuB154
Csa7G451990	Cucumber (Chinese Long) v2	cucuB128
Csa7G451990	Cucumber (Gy14) v1	cgycuB485
Csa7G451990	Cucumber (Gy14) v1	cgycuB508
Csa7G451990	Cucurbita maxima (Rimu)	cmacuB047
Csa7G451990	Cucurbita maxima (Rimu)	cmacuB273
Csa7G451990	Cucurbita maxima (Rimu)	cmacuB383
Csa7G451990	Cucurbita maxima (Rimu)	cmacuB490
Csa7G451990	Cucurbita maxima (Rimu)	cmacuB919
Csa7G451990	Cucurbita moschata (Rifu)	cmocuB035
Csa7G451990	Cucurbita moschata (Rifu)	cmocuB261
Csa7G451990	Cucurbita moschata (Rifu)	cmocuB373
Csa7G451990	Cucurbita moschata (Rifu)	cmocuB480
Csa7G451990	Cucurbita moschata (Rifu)	cmocuB905
Csa7G451990	Melon (DHL92) v3.5.1	cumeB521
Csa7G451990	Melon (DHL92) v3.5.1	cumeB554
Csa7G451990	Melon (DHL92) v3.5.1	cumeB559
Csa7G451990	Watermelon (Charleston Gray)	cuwcgB524
Csa7G451990	Watermelon (Charleston Gray)	cuwcgB558
Csa7G451990	Watermelon (Charleston Gray)	cuwcgB567
Csa7G451990	Watermelon (97103) v1	cuwmB566
Csa7G451990	Watermelon (97103) v1	cuwmB583
Csa7G451990	Watermelon (97103) v1	cuwmB592
Csa7G451990	Cucurbita pepo (Zucchini)	cpecuB156
Csa7G451990	Cucurbita pepo (Zucchini)	cpecuB336
Csa7G451990	Cucurbita pepo (Zucchini)	cpecuB594
Csa7G451990	Cucurbita pepo (Zucchini)	cpecuB632
Csa7G451990	Bottle gourd (USVL1VR-Ls)	culsiB503
Csa7G451990	Bottle gourd (USVL1VR-Ls)	culsiB525
Csa7G451990	Bottle gourd (USVL1VR-Ls)	culsiB533
Csa7G451990	Cucumber (Gy14) v2	cgybcuB149
Csa7G451990	Cucumber (Gy14) v2	cgybcuB193
Csa7G451990	Cucumber (Gy14) v2	cgybcuB323
Csa7G451990	Melon (DHL92) v3.6.1	cumedB501
Csa7G451990	Melon (DHL92) v3.6.1	cumedB531
Csa7G451990	Melon (DHL92) v3.6.1	cumedB537
Csa7G451990	Silver-seed gourd	carcuB0129
Csa7G451990	Silver-seed gourd	carcuB0230
Csa7G451990	Silver-seed gourd	carcuB0761
Csa7G451990	Silver-seed gourd	carcuB1039