Csa7G450650 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATTGATGGTAGTTTCAAACTTGAATCCGCAGTGGAAAGATTTCTTTCCCGTTGCCCATCTCTTACACACCAATCTCCGTTTGAAACGATTATTAGAAAGGTATTTTTGTTTATCACACATGCATGTGATGTTTGATTAGTTTGAGTACAAACATTTTATTTTTCACCTTTTGATATACATTTTTAAAGGGTTTCTCGAATTTTTTAGCGAGACAACAATTTTGATATTGTTACTTTTGAATGCTATTTCAATGAATGGACACAACAAGGCTCTTTGCCTCTGATCGATATGAGAAGTTGCTGTTAAGAATTTGTTTCTCTGCCTCTAATCACATCTTAATATATCACTCCTGTTCTCTGATTTTTGTAGGGATATGGAGTAACTGAAGAGGAAGTTTTGAGTCTTTTGGCTGAGCTGTTTTTGAATCCAAATTATTCAGTATGTTTACTAGGTTGTTTCCGTCCAGTAGCTCAAAAGATCGTGGATAGGGTAATTGGACTGTTAAGGCATGTTCCCAATTTAAGATCAAACTCCACATACTCAGAAATTCATGAAAAGGAGCTGGATGGAGTGGTCAATATAATTTCGTTTTATGATCAGAGAGGGAGGGGGGTTGATCTTCACGAGCTTGCTTGTCTAGCATTCTGTCGTGCCCTTGATTTAGCCCCTTTCTTATTAAGGTTTGTCAGTTACTCTGCTGGATTTTGGATTTGTAGCTTTTAGGGTCTGTCTAGTTTGATGTGTGCGTTCATGTTTTCCATGGTCAATATGCCCTGTAATATATGTTATTTTCTATTTGCACAGGACTATTTTAAATTATTTCAAGTTTGCTCCATGCCCTTTTCACCGTATTGTGGTCAAAGGAGCAAGTTCTGAGGTTTATAACAAGGTATCTATTCTGATTGCGTGCTTGTGCGTTTTATAGAAGATTTATAATGAGCTTATTTGTCTTCATTCTGAATACGATTAGCATATTTCTTAATGAGTTGGTTTTCATGAGAAAAAAAGAAAAAACGAACAGTTCCATCCCTGCCAAGGGCACCTTAAAAACTTGCAGACACTACAGCCAAGGATGTGAGTTTAAGAACAGTAATTTATTGATTTTTTTTAAAAATGAAATGAAACTTTTCATTTATTTAATGAAAAGAGATTAATGCTCAAAATACAAAGTAAAAAATAAGAAGAGAAGGAAATTACCATAGTACATATGAACAAACCAAGGAAAACAAAGACATTCCAAATTAAACACAAATCTTGAATAGAGAATGCTGCAAACGATTTGGAGAAAAAGCACCAAGAGGAGGCTTTAATCTAGGGGAACTCAAACTGATCAAACCGAAGAAGAGACTTTTCTGGCAAAACATGCTGATTCTTTCAAACTAAATCTCCGCAAGAATAACTTTAACTGCATTTAACCATAGGAACTGATATTGAGATTTCAAAAACGGGCCTCCCAATAAATGACGGAGTTTTTAATTCTTCAACAACTTGTAGCATCTCCTTTGTCTTCTTCTGCAATTCAGATTTTATCTGCTTCTATAGGATAATGATTTATTATAATTGACCAGAATTCTTCAAGTTCAAAGAATTATACCTTGAAGCATTTGGAATGAACTTTTGAATATTTCAGGCAAACATGCCCTTTCCACTCTCTCTCTCTCTCTCTCCCTCATTTGAATTTGTAAAGCAAAGGTTCCATTCTCTGGCCTCATGAATTCAGCAGTTGAACATATGCATAATTTTTGGCATGCCATAAAGAAAAATATTTTAAGACCTTATCAGCCATTTGTGCTGCCATAATTTAACCAGATACCCTTGCAAGCCATTTTGAAGAGCGAACACTCCTGGGTGATTTTGTGATTTTCATAATAACAATCCCATCCAGTTAACTAGCAGATAGTCTTTCTCATACTTTCTCGAATTAATATACTAAAGGGGTTCACCTTCTGCAGGGTGTCTTGAATCCTCTTTGCTAATGAAGTCTCATTACCAATGATCAAGGTGCCAGCCTCCGAAGGTGGAGTAACCGTGTTTCCTCTTTCTATTTCCCCTCCAACAGAAACTCTCTAATATTCATTCCCACCGTTTAGCTACTTTGTTAGGGATTTTAAAGATAGAATGGAAATATGCAGGGATGTTACCAACACTGATTGAGCGAGTGTGAACTCTTATGTTGATGGATTTTATTAGAATATTCACTTAAACTTTTGAAGTTGTGTGGATAGAGTGTTATTACGGCTTACTTGGACGGGTTAAAACCAAAGAATTCTACCCAAGAAACAGAAAGACTTCATTTATATTGCACTGTGTAATTGATGTAATCTAAGTAACCTCTAGGAGAAGTCCTCCAAGAACCAAGAACCAAGACTATGGATTTTTTATTAGAATGAATAATATGTTTCATACAAGAGAAGTCTCCTATTTATAGAGTTCTATTACAATTGGGGGTAAAAAGGGAATTAACCTAGAATATGTCCTAATTACCCAATTAACCCTTAGTCTTCTTACATAGTTACATCAGTACTCTTGGTGTTTTTTTTATTAACTTGTAATTTCCTTTTTAAATGGGATTTTCTTTTCTATCCCCCAACCTATAAGGTGCATTCTCATTTTCTTTTTGGCTATAAATCCTGTTTCTTATATATATATTTATATGTATGAACAAGACTTTAATCCAATAATCCATAATTTCTCTGCCTGGCTATTCGTTTTTCTCCAAGAATGTAAGTCATACTAAGTCATACTACTATATCTTTCAAGAACATTAGTCACCTGTTGATTTTTCCTTATCTAGGGTGGATTGCTTGCTGTTCGGTTGTCTTATCGCCTTCTACTGGTGGAGCCTGAAACTTTTACTCAACTATGGGATTGGTCGTGTTTCTTGGACTTTATGAAGCAGCTACCAAACATTGACCTTGATAATGCAAGATTTTTACTTTTACCGGACATAAGATGGTGCGGGATACAGATACTATCAATTTTGCTTAATTTGGGTTATGAAGCAACCACAAATTTGTTGTCTGGGTCTGAAGAAACATTAGCTTGCTTACTGCGGTTTGCTCTTAACCTTGCTGGTTTCTGTTATATAACAAAAATTGCTTCTATATGCTTCATGTTGCCCCTTTCATTTGCAGTAGCTGGGCCCCCTTCCTGTAGTGGGGGTCCCCTGTCTTTTGGGGCTTGGTTTTTTGTGTGCTCGTGTGATCTTTCATTTTTTCTCAATGAAATGCTCTCATTTCAATAATTTTTTTTTTTGCAGATGGGAAGAATTCTGTCAGGATGTATCCATGGAGAAGGCTGGCTCCTATGCTGAGTTATTTGTGAAGGAATCGGTTTCTCAAGGCATGAAAACTGATTTTGACTCAGAAAACTGCCTGCTTGCCAATTCTAGCTTCTGTGGTCCTGCCATTCTCTCGAATCATGATGAGATTGAACGACCAATTAGAAGTCAACGACTTGCTACATGGTAACACTATGACACTTCAATTTAGCCTACTTAGTAAGTTCTGTTTCATTTTTTAAAAAAAGTAAATTGTTTTTTTTTCTCTCTGTTGTCAAGAACAGAAGAAGAGTTTGCATTATTTTGATCCTGTATTTTCTCGTTAGCAATAATTTTGGGATTCCTTTTCTTTGTTTCTTTCTTTATATTTGAGACAATGATTTACTTCACACAGGGGCAGTCCGAAGGCTGAGAATTCATTTTTTATGACATCATCTATAAAGAAAGGTTATGAGATGATTATGTTGGCACTGAGTCAAAAGTGGCCAGTTCTTTTGTATGGTCCCCCTGGAGCTGGGAAATCGGCTCTCATAAATAAGATAGCCAGTGACAGCCATAACCAAGGTAGTAATTGTTTTTATGGTTCAGTAGACATGATCTCTTTATAA ATGGCCATTGATGGTAGTTTCAAACTTGAATCCGCAGTGGAAAGATTTCTTTCCCGTTGCCCATCTCTTACACACCAATCTCCGTTTGAAACGATTATTAGAAAGGGATATGGAGTAACTGAAGAGGAAGTTTTGAGTCTTTTGGCTGAGCTGTTTTTGAATCCAAATTATTCAGTATGTTTACTAGGTTGTTTCCGTCCAGTAGCTCAAAAGATCGTGGATAGGGTAATTGGACTGTTAAGGCATGTTCCCAATTTAAGATCAAACTCCACATACTCAGAAATTCATGAAAAGGAGCTGGATGGAGTGGTCAATATAATTTCGTTTTATGATCAGAGAGGGAGGGGGGTTGATCTTCACGAGCTTGCTTGTCTAGCATTCTGTCGTGCCCTTGATTTAGCCCCTTTCTTATTAAGGACTATTTTAAATTATTTCAAGTTTGCTCCATGCCCTTTTCACCGTATTGTGGTCAAAGGAGCAAGTTCTGAGGTTTATAACAAGGGTGGATTGCTTGCTGTTCGGTTGTCTTATCGCCTTCTACTGGTGGAGCCTGAAACTTTTACTCAACTATGGGATTGGTCGTGTTTCTTGGACTTTATGAAGCAGCTACCAAACATTGACCTTGATAATGCAAGATTTTTACTTTTACCGGACATAAGATGGTGCGGGATACAGATACTATCAATTTTGCTTAATTTGGGTTATGAAGCAACCACAAATTTGTTGTCTGGGTCTGAAGAAACATTAGCTTGCTTACTGCGATGGGAAGAATTCTGTCAGGATGTATCCATGGAGAAGGCTGGCTCCTATGCTGAGTTATTTGTGAAGGAATCGGTTTCTCAAGGCATGAAAACTGATTTTGACTCAGAAAACTGCCTGCTTGCCAATTCTAGCTTCTGTGGTCCTGCCATTCTCTCGAATCATGATGAGATTGAACGACCAATTAGAAGTCAACGACTTGCTACATGGGGCAGTCCGAAGGCTGAGAATTCATTTTTTATGACATCATCTATAAAGAAAGGTTATGAGATGATTATGTTGGCACTGAGTCAAAAGTGGCCAGTTCTTTTGTATGGTCCCCCTGGAGCTGGGAAATCGGCTCTCATAAATAAGATAGCCAGTGACAGCCATAACCAAGGTAGTAATTGTTTTTATGGTTCAGTAGACATGATCTCTTTATAA ATGGCCATTGATGGTAGTTTCAAACTTGAATCCGCAGTGGAAAGATTTCTTTCCCGTTGCCCATCTCTTACACACCAATCTCCGTTTGAAACGATTATTAGAAAGGGATATGGAGTAACTGAAGAGGAAGTTTTGAGTCTTTTGGCTGAGCTGTTTTTGAATCCAAATTATTCAGTATGTTTACTAGGTTGTTTCCGTCCAGTAGCTCAAAAGATCGTGGATAGGGTAATTGGACTGTTAAGGCATGTTCCCAATTTAAGATCAAACTCCACATACTCAGAAATTCATGAAAAGGAGCTGGATGGAGTGGTCAATATAATTTCGTTTTATGATCAGAGAGGGAGGGGGGTTGATCTTCACGAGCTTGCTTGTCTAGCATTCTGTCGTGCCCTTGATTTAGCCCCTTTCTTATTAAGGACTATTTTAAATTATTTCAAGTTTGCTCCATGCCCTTTTCACCGTATTGTGGTCAAAGGAGCAAGTTCTGAGGTTTATAACAAGGGTGGATTGCTTGCTGTTCGGTTGTCTTATCGCCTTCTACTGGTGGAGCCTGAAACTTTTACTCAACTATGGGATTGGTCGTGTTTCTTGGACTTTATGAAGCAGCTACCAAACATTGACCTTGATAATGCAAGATTTTTACTTTTACCGGACATAAGATGGTGCGGGATACAGATACTATCAATTTTGCTTAATTTGGGTTATGAAGCAACCACAAATTTGTTGTCTGGGTCTGAAGAAACATTAGCTTGCTTACTGCGATGGGAAGAATTCTGTCAGGATGTATCCATGGAGAAGGCTGGCTCCTATGCTGAGTTATTTGTGAAGGAATCGGTTTCTCAAGGCATGAAAACTGATTTTGACTCAGAAAACTGCCTGCTTGCCAATTCTAGCTTCTGTGGTCCTGCCATTCTCTCGAATCATGATGAGATTGAACGACCAATTAGAAGTCAACGACTTGCTACATGGGGCAGTCCGAAGGCTGAGAATTCATTTTTTATGACATCATCTATAAAGAAAGGTTATGAGATGATTATGTTGGCACTGAGTCAAAAGTGGCCAGTTCTTTTGTATGGTCCCCCTGGAGCTGGGAAATCGGCTCTCATAAATAAGATAGCCAGTGACAGCCATAACCAAGGTAGTAATTGTTTTTATGGTTCAGTAGACATGATCTCTTTATAA MAIDGSFKLESAVERFLSRCPSLTHQSPFETIIRKGYGVTEEEVLSLLAELFLNPNYSVCLLGCFRPVAQKIVDRVIGLLRHVPNLRSNSTYSEIHEKELDGVVNIISFYDQRGRGVDLHELACLAFCRALDLAPFLLRTILNYFKFAPCPFHRIVVKGASSEVYNKGGLLAVRLSYRLLLVEPETFTQLWDWSCFLDFMKQLPNIDLDNARFLLLPDIRWCGIQILSILLNLGYEATTNLLSGSEETLACLLRWEEFCQDVSMEKAGSYAELFVKESVSQGMKTDFDSENCLLANSSFCGPAILSNHDEIERPIRSQRLATWGSPKAENSFFMTSSIKKGYEMIMLALSQKWPVLLYGPPGAGKSALINKIASDSHNQGSNCFYGSVDMISL*
BLAST of Csa7G450650 vs. Swiss-Prot
Match: MDN1_HUMAN (Midasin OS=Homo sapiens GN=MDN1 PE=1 SV=2) HSP 1 Score: 64.3 bits (155), Expect = 3.4e-09 Identity = 60/269 (22.30%), Postives = 111/269 (41.26%), Query Frame = 1
HSP 2 Score: 32.0 bits (71), Expect = 1.9e+01 Identity = 14/36 (38.89%), Postives = 20/36 (55.56%), Query Frame = 1
BLAST of Csa7G450650 vs. TrEMBL
Match: A0A0A0KAY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G450650 PE=4 SV=1) HSP 1 Score: 795.0 bits (2052), Expect = 4.0e-227 Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 1
BLAST of Csa7G450650 vs. TrEMBL
Match: A0A0B2NWG0_GLYSO (Midasin OS=Glycine soja GN=glysoja_009586 PE=3 SV=1) HSP 1 Score: 382.5 bits (981), Expect = 6.3e-103 Identity = 202/390 (51.79%), Postives = 259/390 (66.41%), Query Frame = 1
BLAST of Csa7G450650 vs. TrEMBL
Match: A0A0B2NWG0_GLYSO (Midasin OS=Glycine soja GN=glysoja_009586 PE=3 SV=1) HSP 1 Score: 32.0 bits (71), Expect = 2.1e+03 Identity = 12/44 (27.27%), Postives = 29/44 (65.91%), Query Frame = 1
HSP 2 Score: 380.2 bits (975), Expect = 3.1e-102 Identity = 200/388 (51.55%), Postives = 268/388 (69.07%), Query Frame = 1
BLAST of Csa7G450650 vs. TrEMBL
Match: A0A0D2UPS0_GOSRA (Midasin OS=Gossypium raimondii GN=B456_011G062600 PE=3 SV=1) HSP 1 Score: 32.0 bits (71), Expect = 2.1e+03 Identity = 15/45 (33.33%), Postives = 30/45 (66.67%), Query Frame = 1
HSP 2 Score: 29.6 bits (65), Expect = 1.0e+04 Identity = 14/37 (37.84%), Postives = 22/37 (59.46%), Query Frame = 1
HSP 3 Score: 379.4 bits (973), Expect = 5.3e-102 Identity = 202/403 (50.12%), Postives = 274/403 (67.99%), Query Frame = 1
BLAST of Csa7G450650 vs. TrEMBL
Match: F6HXY6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g01610 PE=3 SV=1) HSP 1 Score: 31.6 bits (70), Expect = 2.7e+03 Identity = 14/45 (31.11%), Postives = 30/45 (66.67%), Query Frame = 1
HSP 2 Score: 377.9 bits (969), Expect = 1.5e-101 Identity = 200/387 (51.68%), Postives = 257/387 (66.41%), Query Frame = 1
BLAST of Csa7G450650 vs. TAIR10
Match: AT1G67120.1 (AT1G67120.1 ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding) HSP 1 Score: 287.7 bits (735), Expect = 1.1e-77 Identity = 172/387 (44.44%), Postives = 229/387 (59.17%), Query Frame = 1
HSP 2 Score: 32.3 bits (72), Expect = 8.0e-01 Identity = 23/72 (31.94%), Postives = 36/72 (50.00%), Query Frame = 1
BLAST of Csa7G450650 vs. NCBI nr
Match: gi|700190274|gb|KGN45507.1| (hypothetical protein Csa_7G450650 [Cucumis sativus]) HSP 1 Score: 795.0 bits (2052), Expect = 5.8e-227 Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 1
BLAST of Csa7G450650 vs. NCBI nr
Match: gi|778729762|ref|XP_011659635.1| (PREDICTED: midasin [Cucumis sativus]) HSP 1 Score: 766.1 bits (1977), Expect = 2.9e-218 Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 1
BLAST of Csa7G450650 vs. NCBI nr
Match: gi|778729762|ref|XP_011659635.1| (PREDICTED: midasin [Cucumis sativus]) HSP 1 Score: 35.0 bits (79), Expect = 3.5e+02 Identity = 16/50 (32.00%), Postives = 32/50 (64.00%), Query Frame = 1
HSP 2 Score: 30.4 bits (67), Expect = 8.7e+03 Identity = 15/37 (40.54%), Postives = 21/37 (56.76%), Query Frame = 1
HSP 3 Score: 728.0 bits (1878), Expect = 8.7e-207 Identity = 360/379 (94.99%), Postives = 369/379 (97.36%), Query Frame = 1
BLAST of Csa7G450650 vs. NCBI nr
Match: gi|659124762|ref|XP_008462334.1| (PREDICTED: LOW QUALITY PROTEIN: midasin [Cucumis melo]) HSP 1 Score: 35.0 bits (79), Expect = 3.5e+02 Identity = 16/50 (32.00%), Postives = 32/50 (64.00%), Query Frame = 1
HSP 2 Score: 30.4 bits (67), Expect = 8.7e+03 Identity = 15/37 (40.54%), Postives = 21/37 (56.76%), Query Frame = 1
HSP 3 Score: 382.5 bits (981), Expect = 9.0e-103 Identity = 202/390 (51.79%), Postives = 259/390 (66.41%), Query Frame = 1
BLAST of Csa7G450650 vs. NCBI nr
Match: gi|734313483|gb|KHN01380.1| (Midasin [Glycine soja]) HSP 1 Score: 32.0 bits (71), Expect = 3.0e+03 Identity = 12/44 (27.27%), Postives = 29/44 (65.91%), Query Frame = 1
HSP 2 Score: 380.2 bits (975), Expect = 4.5e-102 Identity = 200/388 (51.55%), Postives = 268/388 (69.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |