Csa7G448040 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G448040
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 18216201 .. 18216509 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAAGGGAATCCGAATCTCATCAAGTTTATCAAAGAAAGCAAATCGCCAGATCATAGTAGTTGCAACAAGTCAAGAATGATGAGTTGGCCTACACAAATTAGTAAATACGTACAATTATGGACGAACATCTCAATAGATATTTATTCTATGATTTCTTTTATTAAATGTTTATTACTTTTCAGAAGGGACCATCCCAATGACATCCTTATCACTCGAGTTCCTTCTAATGAGAAAAGAGGGAAAGAGATAGCATTTCTTTCTTTTGATAAGGGACCATCCTACTATGCTAAAGAAAAAAAATGA

mRNA sequence

ATGAAAGAAGGGAATCCGAATCTCATCAAGTTTATCAAAGAAAGCAAATCGCCAGATCATAGTAGTTGCAACAAGTCAAGAATGATGAGTTGGCCTACACAAATTAGTAAATACGTACAATTATGGACGAACATCTCAATAGATATTTATTCTATGATTTCTTTTATTAAATGTTTATTACTTTTCAGAAGGGACCATCCCAATGACATCCTTATCACTCGAGTTCCTTCTAATGAGAAAAGAGGGAAAGAGATAGCATTTCTTTCTTTTGATAAGGGACCATCCTACTATGCTAAAGAAAAAAAATGA

Coding sequence (CDS)

ATGAAAGAAGGGAATCCGAATCTCATCAAGTTTATCAAAGAAAGCAAATCGCCAGATCATAGTAGTTGCAACAAGTCAAGAATGATGAGTTGGCCTACACAAATTAGTAAATACGTACAATTATGGACGAACATCTCAATAGATATTTATTCTATGATTTCTTTTATTAAATGTTTATTACTTTTCAGAAGGGACCATCCCAATGACATCCTTATCACTCGAGTTCCTTCTAATGAGAAAAGAGGGAAAGAGATAGCATTTCTTTCTTTTGATAAGGGACCATCCTACTATGCTAAAGAAAAAAAATGA

Protein sequence

MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLLLFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK*
Homology
[Close]
BLAST of Csa7G448040 vs. TrEMBL
Match: A0A0A0KAN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G448040 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.2e-52
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL 60
           MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL
Sbjct: 1   MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL 60

Query: 61  LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK 103
           LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK
Sbjct: 61  LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK 102

[Close]
BLAST of Csa7G448040 vs. NCBI nr
Match: gi|700190209|gb|KGN45442.1| (hypothetical protein Csa_7G448040 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-52
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL 60
           MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL
Sbjct: 1   MKEGNPNLIKFIKESKSPDHSSCNKSRMMSWPTQISKYVQLWTNISIDIYSMISFIKCLL 60

Query: 61  LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK 103
           LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK
Sbjct: 61  LFRRDHPNDILITRVPSNEKRGKEIAFLSFDKGPSYYAKEKK 102

The following BLAST results are available for this feature:
BLAST of Csa7G448040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAN2_CUCSA2.2e-52100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G448040 PE=4 SV=1[more]
BLAST of Csa7G448040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190209|gb|KGN45442.1|3.2e-52100.00hypothetical protein Csa_7G448040 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU113763cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G448040.1Csa7G448040.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU113763CU113763transcribed_cluster