Csa7G433920 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G433920
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 17433215 .. 17433567 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACACTGAACAGCATACGGTCACTTCCCGGTTGTTTGGACAATGTACGAAAGGTCGAAAACGAGGTAAGACAAAAAATGAAATTCCAGTGGAATCAACAAAATATTGGCAACTTAACTGCCATGCCAAACTTGAGGAAGCCAGTTTGGTTGTCTCTGATGGCTGAAAAGATATGCGCGGTGCTGCCATGGAACTTTGTTGAGGTAAGCTTTATGAAGGAAATGTGCAAATGGATTTGATGTAATAACTTTGGTAAATCATATACAAAATTCGCCCATTAGAGTAACACATTGAAGTATTCATGTCAATACTTGATAAATTACAGAATGAAAATACTCATTTGCCATAG

mRNA sequence

ATGGCAACACTGAACAGCATACGGTCACTTCCCGGTTGTTTGGACAATGTACGAAAGGTCGAAAACGAGGTAAGACAAAAAATGAAATTCCAGTGGAATCAACAAAATATTGGCAACTTAACTGCCATGCCAAACTTGAGGAAGCCAGTTTGGTTGTCTCTGATGGCTGAAAAGATATGCGCGGTGCTGCCATGGAACTTTGTTGAGAATGAAAATACTCATTTGCCATAG

Coding sequence (CDS)

ATGGCAACACTGAACAGCATACGGTCACTTCCCGGTTGTTTGGACAATGTACGAAAGGTCGAAAACGAGGTAAGACAAAAAATGAAATTCCAGTGGAATCAACAAAATATTGGCAACTTAACTGCCATGCCAAACTTGAGGAAGCCAGTTTGGTTGTCTCTGATGGCTGAAAAGATATGCGCGGTGCTGCCATGGAACTTTGTTGAGAATGAAAATACTCATTTGCCATAG

Protein sequence

MATLNSIRSLPGCLDNVRKVENEVRQKMKFQWNQQNIGNLTAMPNLRKPVWLSLMAEKICAVLPWNFVENENTHLP*
Homology
[Close]
BLAST of Csa7G433920 vs. TrEMBL
Match: A0A0A0K8X5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433920 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 2.6e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 

Query: 1  MATLNSIRSLPGCLDNVRKVENEVRQKMKFQWNQQNIGNLTAMPNLRKPVWLSLMAEKIC 60
          MATLNSIRSLPGCLDNVRKVENEVRQKMKFQWNQQNIGNLTAMPNLRKPVWLSLMAEKIC
Sbjct: 1  MATLNSIRSLPGCLDNVRKVENEVRQKMKFQWNQQNIGNLTAMPNLRKPVWLSLMAEKIC 60

Query: 61 AVLPWNFVENENTHLP 77
          AVLPWNFVENENTHLP
Sbjct: 61 AVLPWNFVENENTHLP 76

[Close]
BLAST of Csa7G433920 vs. NCBI nr
Match: gi|700190081|gb|KGN45314.1| (hypothetical protein Csa_7G433920 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 3.7e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 

Query: 1  MATLNSIRSLPGCLDNVRKVENEVRQKMKFQWNQQNIGNLTAMPNLRKPVWLSLMAEKIC 60
          MATLNSIRSLPGCLDNVRKVENEVRQKMKFQWNQQNIGNLTAMPNLRKPVWLSLMAEKIC
Sbjct: 1  MATLNSIRSLPGCLDNVRKVENEVRQKMKFQWNQQNIGNLTAMPNLRKPVWLSLMAEKIC 60

Query: 61 AVLPWNFVENENTHLP 77
          AVLPWNFVENENTHLP
Sbjct: 61 AVLPWNFVENENTHLP 76

The following BLAST results are available for this feature:
BLAST of Csa7G433920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8X5_CUCSA2.6e-37100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G433920 PE=4 SV=1[more]
BLAST of Csa7G433920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190081|gb|KGN45314.1|3.7e-37100.00hypothetical protein Csa_7G433920 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU143638cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G433920.1Csa7G433920.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU143638CU143638transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G433920Bottle gourd (USVL1VR-Ls)culsiB501
Csa7G433920Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G433920Bottle gourd (USVL1VR-Ls)culsiB532
Csa7G433920Cucumber (Gy14) v2cgybcuB093
Csa7G433920Cucumber (Gy14) v2cgybcuB094
Csa7G433920Cucumber (Gy14) v2cgybcuB323
Csa7G433920Melon (DHL92) v3.6.1cumedB501
Csa7G433920Silver-seed gourdcarcuB0143
Csa7G433920Silver-seed gourdcarcuB0130
Csa7G433920Silver-seed gourdcarcuB0161
Csa7G433920Silver-seed gourdcarcuB0229
Csa7G433920Silver-seed gourdcarcuB0601
Csa7G433920Silver-seed gourdcarcuB1041
Csa7G433920Watermelon (97103) v2cuwmbB520
Csa7G433920Watermelon (97103) v2cuwmbB548
Csa7G433920Watermelon (97103) v2cuwmbB555
Csa7G433920Watermelon (97103) v2cuwmbB570
Csa7G433920Wax gourdcuwgoB677
Csa7G433920Wax gourdcuwgoB690
Csa7G433920Wax gourdcuwgoB712
Csa7G433920Cucumber (Chinese Long) v2cucuB084
Csa7G433920Cucumber (Chinese Long) v2cucuB085
Csa7G433920Cucumber (Gy14) v1cgycuB046
Csa7G433920Cucumber (Gy14) v1cgycuB244
Csa7G433920Cucurbita maxima (Rimu)cmacuB388
Csa7G433920Cucurbita maxima (Rimu)cmacuB497
Csa7G433920Cucurbita maxima (Rimu)cmacuB811
Csa7G433920Cucurbita maxima (Rimu)cmacuB921
Csa7G433920Cucurbita moschata (Rifu)cmocuB072
Csa7G433920Cucurbita moschata (Rifu)cmocuB185
Csa7G433920Cucurbita moschata (Rifu)cmocuB263
Csa7G433920Cucurbita moschata (Rifu)cmocuB378
Csa7G433920Cucurbita moschata (Rifu)cmocuB486
Csa7G433920Cucurbita moschata (Rifu)cmocuB803
Csa7G433920Cucurbita moschata (Rifu)cmocuB906
Csa7G433920Melon (DHL92) v3.5.1cumeB521
Csa7G433920Melon (DHL92) v3.5.1cumeB548
Csa7G433920Watermelon (Charleston Gray)cuwcgB524
Csa7G433920Watermelon (Charleston Gray)cuwcgB535
Csa7G433920Watermelon (Charleston Gray)cuwcgB564
Csa7G433920Watermelon (Charleston Gray)cuwcgB569
Csa7G433920Watermelon (97103) v1cuwmB566
Csa7G433920Watermelon (97103) v1cuwmB578
Csa7G433920Watermelon (97103) v1cuwmB585
Csa7G433920Watermelon (97103) v1cuwmB610
Csa7G433920Watermelon (97103) v1cuwmB615
Csa7G433920Cucurbita pepo (Zucchini)cpecuB125
Csa7G433920Cucurbita pepo (Zucchini)cpecuB161
Csa7G433920Cucurbita pepo (Zucchini)cpecuB338
Csa7G433920Cucurbita pepo (Zucchini)cpecuB378
Csa7G433920Cucurbita pepo (Zucchini)cpecuB588