Csa7G432110 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G432110
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr7 : 17094107 .. 17094418 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCAGTGAAGAGATTGTAGAATGTTTAAGCAACCTGCAGCTGAAAAATAGGTATAAGGAAGGATTGTCTGTTTTGAAGGATACAGTGAGACAACCCCTGTATAATCTTCACATATTCGTGAATCATGAATTCTATGTTAATTCTAACAAGGCCTCTCCATATCTCCAACCTTTAGCAAATCACAATGATGTTATAGAAGGTAAAGCCAATCAGCTACTGGGAAGAAGGCAATGGACTCCATGTCAGAGAAGCAAAGTCCCAAACTTTACATCATCTATTTTAACAAGTAGACAGGTTGTGGATAAATAA

mRNA sequence

ATGCGCAGTGAAGAGATTGTAGAATGTTTAAGCAACCTGCAGCTGAAAAATAGGTATAAGGAAGGATTGTCTGTTTTGAAGGATACAGTGAGACAACCCCTGTATAATCTTCACATATTCGTGAATCATGAATTCTATGTTAATTCTAACAAGGCCTCTCCATATCTCCAACCTTTAGCAAATCACAATGATGTTATAGAAGGTAAAGCCAATCAGCTACTGGGAAGAAGGCAATGGACTCCATGTCAGAGAAGCAAAGTCCCAAACTTTACATCATCTATTTTAACAAGTAGACAGGTTGTGGATAAATAA

Coding sequence (CDS)

ATGCGCAGTGAAGAGATTGTAGAATGTTTAAGCAACCTGCAGCTGAAAAATAGGTATAAGGAAGGATTGTCTGTTTTGAAGGATACAGTGAGACAACCCCTGTATAATCTTCACATATTCGTGAATCATGAATTCTATGTTAATTCTAACAAGGCCTCTCCATATCTCCAACCTTTAGCAAATCACAATGATGTTATAGAAGGTAAAGCCAATCAGCTACTGGGAAGAAGGCAATGGACTCCATGTCAGAGAAGCAAAGTCCCAAACTTTACATCATCTATTTTAACAAGTAGACAGGTTGTGGATAAATAA

Protein sequence

MRSEEIVECLSNLQLKNRYKEGLSVLKDTVRQPLYNLHIFVNHEFYVNSNKASPYLQPLANHNDVIEGKANQLLGRRQWTPCQRSKVPNFTSSILTSRQVVDK*

Homology

[Close]

BLAST of Csa7G432110 vs. TrEMBL
Match: A0A0A0K690_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432110 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 3.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MRSEEIVECLSNLQLKNRYKEGLSVLKDTVRQPLYNLHIFVNHEFYVNSNKASPYLQPLA 60
           MRSEEIVECLSNLQLKNRYKEGLSVLKDTVRQPLYNLHIFVNHEFYVNSNKASPYLQPLA
Sbjct: 1   MRSEEIVECLSNLQLKNRYKEGLSVLKDTVRQPLYNLHIFVNHEFYVNSNKASPYLQPLA 60

Query: 61  NHNDVIEGKANQLLGRRQWTPCQRSKVPNFTSSILTSRQVVDK 104
           NHNDVIEGKANQLLGRRQWTPCQRSKVPNFTSSILTSRQVVDK
Sbjct: 61  NHNDVIEGKANQLLGRRQWTPCQRSKVPNFTSSILTSRQVVDK 103

[Close]

BLAST of Csa7G432110 vs. NCBI nr
Match: gi|700189997|gb|KGN45230.1| (hypothetical protein Csa_7G432110 [Cucumis sativus])

HSP 1 Score: 211.8 bits (538), Expect = 5.5e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MRSEEIVECLSNLQLKNRYKEGLSVLKDTVRQPLYNLHIFVNHEFYVNSNKASPYLQPLA 60
           MRSEEIVECLSNLQLKNRYKEGLSVLKDTVRQPLYNLHIFVNHEFYVNSNKASPYLQPLA
Sbjct: 1   MRSEEIVECLSNLQLKNRYKEGLSVLKDTVRQPLYNLHIFVNHEFYVNSNKASPYLQPLA 60

Query: 61  NHNDVIEGKANQLLGRRQWTPCQRSKVPNFTSSILTSRQVVDK 104
           NHNDVIEGKANQLLGRRQWTPCQRSKVPNFTSSILTSRQVVDK
Sbjct: 61  NHNDVIEGKANQLLGRRQWTPCQRSKVPNFTSSILTSRQVVDK 103

The following BLAST results are available for this feature:

BLAST of Csa7G432110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K690_CUCSA	3.9e-52	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432110 PE=4 SV=1	[more]

BLAST of Csa7G432110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700189997\|gb\|KGN45230.1\|	5.5e-52	100.00	hypothetical protein Csa_7G432110 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa7G432110.1	Csa7G432110.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa7G432110	CsGy7G018500	Cucumber (Gy14) v2	cgybcuB323

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa7G432110	Cucurbita pepo (Zucchini)	cpecuB161
Csa7G432110	Cucurbita pepo (Zucchini)	cpecuB343
Csa7G432110	Cucurbita pepo (Zucchini)	cpecuB635
Csa7G432110	Bottle gourd (USVL1VR-Ls)	culsiB503
Csa7G432110	Bottle gourd (USVL1VR-Ls)	culsiB524
Csa7G432110	Bottle gourd (USVL1VR-Ls)	culsiB536
Csa7G432110	Cucumber (Gy14) v2	cgybcuB192
Csa7G432110	Melon (DHL92) v3.6.1	cumedB501
Csa7G432110	Melon (DHL92) v3.6.1	cumedB540
Csa7G432110	Silver-seed gourd	carcuB0160
Csa7G432110	Silver-seed gourd	carcuB0209
Csa7G432110	Silver-seed gourd	carcuB1041
Csa7G432110	Watermelon (97103) v2	cuwmbB540
Csa7G432110	Watermelon (97103) v2	cuwmbB556
Csa7G432110	Watermelon (97103) v2	cuwmbB570
Csa7G432110	Wax gourd	cuwgoB704
Csa7G432110	Cucumber (Chinese Long) v2	cucuB150
Csa7G432110	Cucumber (Gy14) v1	cgycuB126
Csa7G432110	Cucumber (Gy14) v1	cgycuB388
Csa7G432110	Cucurbita maxima (Rimu)	cmacuB388
Csa7G432110	Cucurbita maxima (Rimu)	cmacuB914
Csa7G432110	Cucurbita moschata (Rifu)	cmocuB378
Csa7G432110	Cucurbita moschata (Rifu)	cmocuB900
Csa7G432110	Melon (DHL92) v3.5.1	cumeB521
Csa7G432110	Melon (DHL92) v3.5.1	cumeB563
Csa7G432110	Watermelon (Charleston Gray)	cuwcgB524
Csa7G432110	Watermelon (Charleston Gray)	cuwcgB555
Csa7G432110	Watermelon (Charleston Gray)	cuwcgB570
Csa7G432110	Watermelon (97103) v1	cuwmB566
Csa7G432110	Watermelon (97103) v1	cuwmB579
Csa7G432110	Watermelon (97103) v1	cuwmB585
Csa7G432110	Watermelon (97103) v1	cuwmB589