Csa7G430140 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G430140
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 16732626 .. 16733785 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGTGCCAAAATGAAGATCATAATTATGAAGGTCCCACGATCCACACTCCAAATTTCGAAGCAATGCCCTAAATTCAACGGTTTCAAACCCATAATTGAAGCTTTTGTAATGAATCAATTTAACACCACATCATCAGAGCACTTCCACACGTCTTGGCATTGGCGGCGGCGGCAACAACCTAATGACGGTATCATCCGTTTCTTTTTGTGGCTTTGATCAAGTCTTTCCATTAGATATTTTAGTATTTCAATGGCCACGTTCTCGATAGATTAGAATCAGAGTATGGCTTATCGTCATTCTGTGGCGGTGCACGCATAACAATGAATGTAACAGGTCATAAAATAGAGAAGGTGAAGAAAGAGAATCAAACTAGGCGATGTTTGATGAAAAATTCGAGGCTGATACTTGTTTACACTAGATTTTTTATATCCACTTATCTCTCTTTTCAAACTGAACCTTGACTTGGGATGAATGTGCTTTTCCTTCAACTATAATACACAAATGGAGGCTTCAGCTAGGAGCTAGGGCTGCATTTATACCTTGCTTCTTCTGTATGCTTCGTTTATGATTGAATTTTCGTCCATTTTGAAAAAGCTTATTCTGGCTTCTGTCTGTGCGTTTAATTTCCATTTCTGTAGTTAGAAATTTCTTTGTGGCGTTTGGTGGGAACGGGGTGGAAACTACTATAATGGTAAAGTTTTGGTATAGGCTTATTTTGATTGGGTTTCGCTCTCTTTTTCTGCTCGTTCAATTCACGAAATTGATTGGTATTGGTATTGTAAATACTGAAATTGTTTGTTTAAATGTCACTTGATTGCTAGTAATTTAAATATGACTTCGTTTGCTGGTTCCGTCGTTAATTTAGGAACTCTCCTTTATTTCTTCGGTCTGTCTTTCCCTTTCGGATCGATGGGATCGGGTTTGATTTTTAGGAGCTAAGATTGCTGTATTGTTTAATGGTTATATTTGTGGGACAGCAGAAAAATGATCTTCTGGGTTATCGTAAGGAAATTCGTTTTGTCGTAAATAAATCACAGTTGATCTTCCCCCCTTTTTTTTGGTGTTTAATCGAAACTCTTGTTGTGATTACATTCTGTTTATTATTTCAAGGTGTAATTTGTGACTGTTTATTTCTTTTGTATCAGGTGTCGTAGGCTGA

mRNA sequence

ATGAAGATCATAATTATGAAGGTCCCACGATCCACACTCCAAATTTCGAAGCAATGCCCTAAATTCAACGGTTTCAAACCCATAATTGAAGCTTTTGTAATGAATCAATTTAACACCACATCATCAGAGCACTTCCACACGTCTTGGCATTGGCGGCGGCGGCAACAACCTAATGACGGTGTCGTAGGCTGA

Coding sequence (CDS)

ATGAAGATCATAATTATGAAGGTCCCACGATCCACACTCCAAATTTCGAAGCAATGCCCTAAATTCAACGGTTTCAAACCCATAATTGAAGCTTTTGTAATGAATCAATTTAACACCACATCATCAGAGCACTTCCACACGTCTTGGCATTGGCGGCGGCGGCAACAACCTAATGACGGTGTCGTAGGCTGA

Protein sequence

MKIIIMKVPRSTLQISKQCPKFNGFKPIIEAFVMNQFNTTSSEHFHTSWHWRRRQQPNDGVVG*
Homology
[Close]
BLAST of Csa7G430140 vs. TrEMBL
Match: A0A0A0K8G9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430140 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 7.4e-30
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MKIIIMKVPRSTLQISKQCPKFNGFKPIIEAFVMNQFNTTSSEHFHTSWHWRRRQQPNDG 60
          MKIIIMKVPRSTLQISKQCPKFNGFKPIIEAFVMNQFNTTSSEHFHTSWHWRRRQQPNDG
Sbjct: 1  MKIIIMKVPRSTLQISKQCPKFNGFKPIIEAFVMNQFNTTSSEHFHTSWHWRRRQQPNDG 60

Query: 61 VVG 64
          VVG
Sbjct: 61 VVG 63

[Close]
BLAST of Csa7G430140 vs. NCBI nr
Match: gi|700189946|gb|KGN45179.1| (hypothetical protein Csa_7G430140 [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 1.1e-29
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MKIIIMKVPRSTLQISKQCPKFNGFKPIIEAFVMNQFNTTSSEHFHTSWHWRRRQQPNDG 60
          MKIIIMKVPRSTLQISKQCPKFNGFKPIIEAFVMNQFNTTSSEHFHTSWHWRRRQQPNDG
Sbjct: 1  MKIIIMKVPRSTLQISKQCPKFNGFKPIIEAFVMNQFNTTSSEHFHTSWHWRRRQQPNDG 60

Query: 61 VVG 64
          VVG
Sbjct: 61 VVG 63

The following BLAST results are available for this feature:
BLAST of Csa7G430140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8G9_CUCSA7.4e-30100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430140 PE=4 SV=1[more]
BLAST of Csa7G430140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189946|gb|KGN45179.1|1.1e-29100.00hypothetical protein Csa_7G430140 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU161446cucumber EST collection version 3.0transcribed_cluster
CU161521cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G430140.1Csa7G430140.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU161521CU161521transcribed_cluster
CU161446CU161446transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G430140CsGy7G018030Cucumber (Gy14) v2cgybcuB323
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G430140Silver-seed gourdcarcuB0387
Csa7G430140Silver-seed gourdcarcuB0484
Csa7G430140Watermelon (97103) v2cuwmbB570
Csa7G430140Wax gourdcuwgoB704
Csa7G430140Cucumber (Chinese Long) v2cucuB127
Csa7G430140Cucumber (Gy14) v1cgycuB031
Csa7G430140Cucurbita maxima (Rimu)cmacuB388
Csa7G430140Cucurbita maxima (Rimu)cmacuB914
Csa7G430140Cucurbita moschata (Rifu)cmocuB378
Csa7G430140Cucurbita moschata (Rifu)cmocuB900
Csa7G430140Melon (DHL92) v3.5.1cumeB521
Csa7G430140Watermelon (Charleston Gray)cuwcgB524
Csa7G430140Watermelon (97103) v1cuwmB566
Csa7G430140Cucurbita pepo (Zucchini)cpecuB161
Csa7G430140Cucurbita pepo (Zucchini)cpecuB343
Csa7G430140Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G430140Melon (DHL92) v3.6.1cumedB501