Csa7G398770 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAATCCCTTCCTCCTCCGCCATTGATCTCCTTCTCCTGGAGAAGACTCTCCTCGGCCTCTTCATGGCCATCGTTCTCTCCATCGCCATTTCCAAGCTTCACGGCAAGCGTTTCAAGCTTTCGCCAGGTCCTTTACCCGTCTCGATATTTGGAAACTGGCTCCAAGTCGGCGATGACTTGAACCACCGTAACCTCATAGATCTTGCAAAGAAATTTGGTGATATCTTCTTGCTTCGGATGGGACAGAGGAACCTCGTCGTGTTTCCTCCCCGGATTTAGCCAAGGTAGTGCTCCACACTCATGGAGTTTAA ATGCAAATCCCTTCCTCCTCCGCCATTGATCTCCTTCTCCTGGAGAAGACTCTCCTCGGCCTCTTCATGGCCATCGTTCTCTCCATCGCCATTTCCAAGCTTCACGGCAAGCGTTTCAAGCTTTCGCCAGGTCCTTTACCCGTCTCGATATTTGGAAACTGGCTCCAAGTCGGCGATGACTTGAACCACCGTAACCTCATAGATCTTGCAAAGAAATTTGAGGAACCTCGTCGTGTTTCCTCCCCGGATTTAGCCAAGGTAGTGCTCCACACTCATGGAGTTTAA ATGCAAATCCCTTCCTCCTCCGCCATTGATCTCCTTCTCCTGGAGAAGACTCTCCTCGGCCTCTTCATGGCCATCGTTCTCTCCATCGCCATTTCCAAGCTTCACGGCAAGCGTTTCAAGCTTTCGCCAGGTCCTTTACCCGTCTCGATATTTGGAAACTGGCTCCAAGTCGGCGATGACTTGAACCACCGTAACCTCATAGATCTTGCAAAGAAATTTGAGGAACCTCGTCGTGTTTCCTCCCCGGATTTAGCCAAGGTAGTGCTCCACACTCATGGAGTTTAA MQIPSSSAIDLLLLEKTLLGLFMAIVLSIAISKLHGKRFKLSPGPLPVSIFGNWLQVGDDLNHRNLIDLAKKFEEPRRVSSPDLAKVVLHTHGV*
BLAST of Csa7G398770 vs. Swiss-Prot
Match: TCMO_VIGRR (Trans-cinnamate 4-monooxygenase OS=Vigna radiata var. radiata GN=CYP73A2 PE=1 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 3.9e-28 Identity = 67/96 (69.79%), Postives = 72/96 (75.00%), Query Frame = 1
BLAST of Csa7G398770 vs. Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 6.6e-28 Identity = 65/96 (67.71%), Postives = 73/96 (76.04%), Query Frame = 1
BLAST of Csa7G398770 vs. Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 6.6e-28 Identity = 66/96 (68.75%), Postives = 73/96 (76.04%), Query Frame = 1
BLAST of Csa7G398770 vs. Swiss-Prot
Match: TCMO_ZINVI (Trans-cinnamate 4-monooxygenase OS=Zinnia violacea GN=CYP73A12 PE=2 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 1.1e-27 Identity = 68/96 (70.83%), Postives = 71/96 (73.96%), Query Frame = 1
BLAST of Csa7G398770 vs. Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 1.5e-27 Identity = 65/96 (67.71%), Postives = 73/96 (76.04%), Query Frame = 1
BLAST of Csa7G398770 vs. TrEMBL
Match: A0A0A0K9B7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398770 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 1.2e-44 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 1
BLAST of Csa7G398770 vs. TrEMBL
Match: A0A0A0KEB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G133710 PE=3 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.0e-27 Identity = 70/96 (72.92%), Postives = 77/96 (80.21%), Query Frame = 1
BLAST of Csa7G398770 vs. TrEMBL
Match: A0A0G2RG03_MANIN (Cinnamate 4-mono-oxygenase OS=Mangifera indica GN=c4h PE=2 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 2.3e-27 Identity = 70/96 (72.92%), Postives = 75/96 (78.12%), Query Frame = 1
BLAST of Csa7G398770 vs. TrEMBL
Match: A0A060DAK9_MANIN (Cinnamate 4-mono-oxygenase OS=Mangifera indica GN=c4h PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 3.0e-27 Identity = 70/96 (72.92%), Postives = 75/96 (78.12%), Query Frame = 1
BLAST of Csa7G398770 vs. TrEMBL
Match: F6K263_PRUAR (Cinnamate 4-hydroxylase OS=Prunus armeniaca GN=C4H PE=3 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 3.9e-27 Identity = 67/96 (69.79%), Postives = 76/96 (79.17%), Query Frame = 1
BLAST of Csa7G398770 vs. TAIR10
Match: AT2G30490.1 (AT2G30490.1 cinnamate-4-hydroxylase) HSP 1 Score: 112.5 bits (280), Expect = 1.5e-25 Identity = 58/96 (60.42%), Postives = 69/96 (71.88%), Query Frame = 1
BLAST of Csa7G398770 vs. NCBI nr
Match: gi|700189734|gb|KGN44967.1| (hypothetical protein Csa_7G398770 [Cucumis sativus]) HSP 1 Score: 186.8 bits (473), Expect = 1.7e-44 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 1
BLAST of Csa7G398770 vs. NCBI nr
Match: gi|659112507|ref|XP_008456253.1| (PREDICTED: trans-cinnamate 4-monooxygenase [Cucumis melo]) HSP 1 Score: 131.7 bits (330), Expect = 6.7e-28 Identity = 71/96 (73.96%), Postives = 77/96 (80.21%), Query Frame = 1
BLAST of Csa7G398770 vs. NCBI nr
Match: gi|700191558|gb|KGN46762.1| (hypothetical protein Csa_6G133710 [Cucumis sativus]) HSP 1 Score: 130.6 bits (327), Expect = 1.5e-27 Identity = 70/96 (72.92%), Postives = 77/96 (80.21%), Query Frame = 1
BLAST of Csa7G398770 vs. NCBI nr
Match: gi|724086274|gb|AIY24979.1| (cinnamate 4-mono-oxygenase [Mangifera indica]) HSP 1 Score: 129.4 bits (324), Expect = 3.3e-27 Identity = 70/96 (72.92%), Postives = 75/96 (78.12%), Query Frame = 1
BLAST of Csa7G398770 vs. NCBI nr
Match: gi|645393032|gb|AIB06733.1| (cinnamate 4-mono-oxygenase [Mangifera indica]) HSP 1 Score: 129.0 bits (323), Expect = 4.3e-27 Identity = 70/96 (72.92%), Postives = 75/96 (78.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |