Csa7G397010 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAAAAAAACCGGCGGTGGCGGGAAGAGTCCTTCCAATGGCGACGGAGGAGAAGCAAGTTATAGTGATCGGAGTCGACGACAGCGAATACGCAACCTACGCTTTAGAATGGACACTCGACCATTTCTTCTCTTCAACGCCAAATCCTCCCTTCAAGCTCGTCGTCGTCTACGCCAAACCGTTTCCCGACGTATTCGTCGGCGTCGGCGGACCTGGAAGTAAGATCAACATTTACAAAATTAGTCTCAAATCCCTGTTCATTGATATATGCTTGGTTTATCGATGCGGTAGTGAATCGAGAAATTGTAATCAGTGATTGTAGGATCTGCGGGAAGTTACCAGTTCCTGAACGAGGATTTGAAGAAGAAAGCAGCGTTGGTCATCGCAACAGCAAGAGGAATCTGCGAATCAAAATCGGTAAGAGGATTTAATATAATTTCTGGATTATTATATGGAATTTTGAATCGAAATGGATTAATTGAGAGAAGTTTGGGGAATTAAATTTGTGTGGAATTCTGTGTTGAGTTTGATTAGATGTTTGGGATGATGGAATGGGAAAATGTAGGTGAATGATGTGAAATATGAGGTGGATGAAGGAGATGCTAGGTATGTGCTGTGTCAGGCGGTGGAGAAGCATAATGCTTCAATGTTGGTGGTGGGAAGCCATGGCTATGGAGCTCTCAAGAGGTAACTTTATTTAACACGCATTTAAGAGGGAAAGAAGAAGAACAAAGCTAAACGTACTTGTGAAATATTTGGTCCCTAAAAATGTACTAATACGTCTAAGAAATTTTGGTCTACTATCAATGCTTAATTTTTTAAAAAAAGATCAATCCACCTAAAAGTCTTTTAAAGAATTGCTCAACTTTATGAACCTATAAAGATTTTTGGTAATTATATTTTTGTTTGCAAACAATTATGTTTAATTAGTCAAAGCCGTAGTAATCACTTTTTTCTTAGAAACCAAGCAATTAGCATTACTTTAGTTGAAGTAGATGGATGATCATATGTGAATGCAGGGCTTTTTTGGGGAGTGTGAGTGACTATTGCGCTCATCAAGCTTCATGTACTGTCATGATTGTCAAGAAACTCAAAACCAAGGAAGGTTAGACACACACAAGTGAATGCAAAACAAATCATGGTCAAATTTAATATCATATATATGAAAAATTAAATAAAA ATGGCGACGGAGGAGAAGCAAGTTATAGTGATCGGAGTCGACGACAGCGAATACGCAACCTACGCTTTAGAATGGACACTCGACCATTTCTTCTCTTCAACGCCAAATCCTCCCTTCAAGCTCGTCGTCGTCTACGCCAAACCGTTTCCCGACGTATTCGTCGGCGTCGGCGGACCTGGAATGATTGTAGGATCTGCGGGAAGTTACCAGTTCCTGAACGAGGATTTGAAGAAGAAAGCAGCGTTGGTCATCGCAACAGCAAGAGGAATCTGCGAATCAAAATCGGTGAATGATGTGAAATATGAGGTGGATGAAGGAGATGCTAGGTATGTGCTGTGTCAGGCGGTGGAGAAGCATAATGCTTCAATGTTGGTGGTGGGAAGCCATGGCTATGGAGCTCTCAAGAGGGCTTTTTTGGGGAGTGTGAGTGACTATTGCGCTCATCAAGCTTCATGTACTGTCATGATTGTCAAGAAACTCAAAACCAAGGAAGGTTAG ATGGCGACGGAGGAGAAGCAAGTTATAGTGATCGGAGTCGACGACAGCGAATACGCAACCTACGCTTTAGAATGGACACTCGACCATTTCTTCTCTTCAACGCCAAATCCTCCCTTCAAGCTCGTCGTCGTCTACGCCAAACCGTTTCCCGACGTATTCGTCGGCGTCGGCGGACCTGGAATGATTGTAGGATCTGCGGGAAGTTACCAGTTCCTGAACGAGGATTTGAAGAAGAAAGCAGCGTTGGTCATCGCAACAGCAAGAGGAATCTGCGAATCAAAATCGGTGAATGATGTGAAATATGAGGTGGATGAAGGAGATGCTAGGTATGTGCTGTGTCAGGCGGTGGAGAAGCATAATGCTTCAATGTTGGTGGTGGGAAGCCATGGCTATGGAGCTCTCAAGAGGGCTTTTTTGGGGAGTGTGAGTGACTATTGCGCTCATCAAGCTTCATGTACTGTCATGATTGTCAAGAAACTCAAAACCAAGGAAGGTTAG MATEEKQVIVIGVDDSEYATYALEWTLDHFFSSTPNPPFKLVVVYAKPFPDVFVGVGGPGMIVGSAGSYQFLNEDLKKKAALVIATARGICESKSVNDVKYEVDEGDARYVLCQAVEKHNASMLVVGSHGYGALKRAFLGSVSDYCAHQASCTVMIVKKLKTKEG*
BLAST of Csa7G397010 vs. Swiss-Prot
Match: PHO34_ARATH (Universal stress protein PHOS34 OS=Arabidopsis thaliana GN=PHOS34 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09 Identity = 46/172 (26.74%), Postives = 73/172 (42.44%), Query Frame = 1
BLAST of Csa7G397010 vs. Swiss-Prot
Match: PHO32_ARATH (Universal stress protein PHOS32 OS=Arabidopsis thaliana GN=PHOS32 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.4e-09 Identity = 46/168 (27.38%), Postives = 75/168 (44.64%), Query Frame = 1
BLAST of Csa7G397010 vs. TrEMBL
Match: A0A0A0K987_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G397010 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 1.1e-88 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1
BLAST of Csa7G397010 vs. TrEMBL
Match: V4SIV6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029382mg PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 6.2e-52 Identity = 107/164 (65.24%), Postives = 130/164 (79.27%), Query Frame = 1
BLAST of Csa7G397010 vs. TrEMBL
Match: A0A0A0K632_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G397020 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 6.8e-51 Identity = 100/159 (62.89%), Postives = 130/159 (81.76%), Query Frame = 1
BLAST of Csa7G397010 vs. TrEMBL
Match: V4SDR9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029454mg PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 4.4e-50 Identity = 103/164 (62.80%), Postives = 126/164 (76.83%), Query Frame = 1
BLAST of Csa7G397010 vs. TrEMBL
Match: A0A067EGJ6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030516mg PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 4.4e-50 Identity = 103/164 (62.80%), Postives = 126/164 (76.83%), Query Frame = 1
BLAST of Csa7G397010 vs. TAIR10
Match: AT2G47710.1 (AT2G47710.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 183.0 bits (463), Expect = 1.6e-46 Identity = 97/165 (58.79%), Postives = 119/165 (72.12%), Query Frame = 1
BLAST of Csa7G397010 vs. TAIR10
Match: AT1G09740.1 (AT1G09740.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 105.9 bits (263), Expect = 2.4e-23 Identity = 62/157 (39.49%), Postives = 88/157 (56.05%), Query Frame = 1
BLAST of Csa7G397010 vs. TAIR10
Match: AT3G62550.1 (AT3G62550.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 99.0 bits (245), Expect = 2.9e-21 Identity = 60/160 (37.50%), Postives = 90/160 (56.25%), Query Frame = 1
BLAST of Csa7G397010 vs. TAIR10
Match: AT5G49050.1 (AT5G49050.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 92.8 bits (229), Expect = 2.1e-19 Identity = 53/122 (43.44%), Postives = 72/122 (59.02%), Query Frame = 1
BLAST of Csa7G397010 vs. TAIR10
Match: AT3G11930.3 (AT3G11930.3 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 90.5 bits (223), Expect = 1.0e-18 Identity = 57/189 (30.16%), Postives = 94/189 (49.74%), Query Frame = 1
BLAST of Csa7G397010 vs. NCBI nr
Match: gi|778730405|ref|XP_004136170.2| (PREDICTED: uncharacterized protein LOC101202825 [Cucumis sativus]) HSP 1 Score: 334.0 bits (855), Expect = 1.5e-88 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1
BLAST of Csa7G397010 vs. NCBI nr
Match: gi|778730405|ref|XP_004136170.2| (PREDICTED: uncharacterized protein LOC101202825 [Cucumis sativus]) HSP 1 Score: 208.4 bits (529), Expect = 9.8e-51 Identity = 100/159 (62.89%), Postives = 130/159 (81.76%), Query Frame = 1
HSP 2 Score: 334.0 bits (855), Expect = 1.5e-88 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1
BLAST of Csa7G397010 vs. NCBI nr
Match: gi|659101388|ref|XP_008451579.1| (PREDICTED: uncharacterized protein LOC103492817 [Cucumis melo]) HSP 1 Score: 325.9 bits (834), Expect = 4.2e-86 Identity = 161/165 (97.58%), Postives = 163/165 (98.79%), Query Frame = 1
BLAST of Csa7G397010 vs. NCBI nr
Match: gi|567862184|ref|XP_006423746.1| (hypothetical protein CICLE_v10029382mg [Citrus clementina]) HSP 1 Score: 211.8 bits (538), Expect = 8.8e-52 Identity = 107/164 (65.24%), Postives = 130/164 (79.27%), Query Frame = 1
BLAST of Csa7G397010 vs. NCBI nr
Match: gi|568868417|ref|XP_006487496.1| (PREDICTED: universal stress protein A-like protein isoform X2 [Citrus sinensis]) HSP 1 Score: 209.5 bits (532), Expect = 4.4e-51 Identity = 106/164 (64.63%), Postives = 129/164 (78.66%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |