Csa7G396500 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G396500
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 15292167 .. 15292546 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAGGTACGTACCGTGTGAGGTGGTGACTAAGCACCGGGTACGAAACTGTGGCCGTGGAGCTATCAAAAGGCACTTTCTCCTAAACGCAGTATTAGTTTTGTCTTTTTTCTTTTCGAGTCCGTTGGAGATATATAACCAGGTGTGGATAAGAGAAAAACATAAGGAGGCTGGCAATAAGCTTGCCAAGGAGTTGGAGAAGTTAGATAGTTCCATTAATTATGGGAGTAAGAAAGCCTCCTCCAAGGAGGGGAGGCTGTCTAGTCTAAGTGTTATGAACTGTTTTCTGGAATGTAAGGGGGTTAGATGCCAGATGCTTAGACAGGAGATTTCTGATATTCTCATTCTGATGGAAACTAGAAGAAGTTCGTTTTGTTAG

mRNA sequence

ATGCTAGGTACGTACCGTGTGAGTCCGTTGGAGATATATAACCAGGTGTGGATAAGAGAAAAACATAAGGAGGCTGGCAATAAGCTTGCCAAGGAGTTGGAGAAGTTAGATAGTTCCATTAATTATGGGAGTAAGAAAGCCTCCTCCAAGGAGGGGAGGCTGTCTAGTCTAAGTGTTATGAACTGTTTTCTGGAATGTAAGGGGGTTAGATGCCAGATGCTTAGACAGGAGATTTCTGATATTCTCATTCTGATGGAAACTAGAAGAAGTTCGTTTTGTTAG

Coding sequence (CDS)

ATGCTAGGTACGTACCGTGTGAGTCCGTTGGAGATATATAACCAGGTGTGGATAAGAGAAAAACATAAGGAGGCTGGCAATAAGCTTGCCAAGGAGTTGGAGAAGTTAGATAGTTCCATTAATTATGGGAGTAAGAAAGCCTCCTCCAAGGAGGGGAGGCTGTCTAGTCTAAGTGTTATGAACTGTTTTCTGGAATGTAAGGGGGTTAGATGCCAGATGCTTAGACAGGAGATTTCTGATATTCTCATTCTGATGGAAACTAGAAGAAGTTCGTTTTGTTAG

Protein sequence

MLGTYRVSPLEIYNQVWIREKHKEAGNKLAKELEKLDSSINYGSKKASSKEGRLSSLSVMNCFLECKGVRCQMLRQEISDILILMETRRSSFC*
Homology
[Close]
BLAST of Csa7G396500 vs. TrEMBL
Match: A0A0A0K5E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396500 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 7.0e-45
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1 

Query: 1  MLGTYRVSPLEIYNQVWIREKHKEAGNKLAKELEKLDSSINYGSKKASSKEGRLSSLSVM 60
          MLGTYRVSPLEIYNQVWIREKHKEAGNKLAKELEKLDSSINYGSKKASSKEGRLSSLSVM
Sbjct: 1  MLGTYRVSPLEIYNQVWIREKHKEAGNKLAKELEKLDSSINYGSKKASSKEGRLSSLSVM 60

Query: 61 NCFLECKGVRCQMLRQEISDILILMETRRSSFC 94
          NCFLECKGVRCQMLRQEISDILILMETRRSSFC
Sbjct: 61 NCFLECKGVRCQMLRQEISDILILMETRRSSFC 93

[Close]
BLAST of Csa7G396500 vs. TrEMBL
Match: A0A0A0KNA2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G453180 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 6.4e-06
Identity = 38/86 (44.19%), Postives = 51/86 (59.30%), Query Frame = 1 

Query: 11  EIYNQVWIREKHKEAGNKLAKELEKLDSSINYGSKKASSKEGRLSSLSVMNCFLECKGVR 70
           E+     ++ K K   + L++EL+KLDSS+N G KKA  KE R S        LE +  R
Sbjct: 50  EVMGSAGVKLKRKGGSDSLSRELKKLDSSVNCGGKKA-LKEARSSR------GLEGQSKR 109

Query: 71  C---QMLRQEISDILILMETRRSSFC 94
               ++LRQE SDI+ LMET+RS FC
Sbjct: 110 SLVKEVLRQEDSDIVFLMETKRSGFC 128

[Close]
BLAST of Csa7G396500 vs. NCBI nr
Match: gi|700189702|gb|KGN44935.1| (hypothetical protein Csa_7G396500 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 1.0e-44
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1 

Query: 1  MLGTYRVSPLEIYNQVWIREKHKEAGNKLAKELEKLDSSINYGSKKASSKEGRLSSLSVM 60
          MLGTYRVSPLEIYNQVWIREKHKEAGNKLAKELEKLDSSINYGSKKASSKEGRLSSLSVM
Sbjct: 1  MLGTYRVSPLEIYNQVWIREKHKEAGNKLAKELEKLDSSINYGSKKASSKEGRLSSLSVM 60

Query: 61 NCFLECKGVRCQMLRQEISDILILMETRRSSFC 94
          NCFLECKGVRCQMLRQEISDILILMETRRSSFC
Sbjct: 61 NCFLECKGVRCQMLRQEISDILILMETRRSSFC 93

[Close]
BLAST of Csa7G396500 vs. NCBI nr
Match: gi|700195933|gb|KGN51110.1| (hypothetical protein Csa_5G453180 [Cucumis sativus])

HSP 1 Score: 58.2 bits (139), Expect = 9.2e-06
Identity = 38/86 (44.19%), Postives = 51/86 (59.30%), Query Frame = 1 

Query: 11  EIYNQVWIREKHKEAGNKLAKELEKLDSSINYGSKKASSKEGRLSSLSVMNCFLECKGVR 70
           E+     ++ K K   + L++EL+KLDSS+N G KKA  KE R S        LE +  R
Sbjct: 50  EVMGSAGVKLKRKGGSDSLSRELKKLDSSVNCGGKKA-LKEARSSR------GLEGQSKR 109

Query: 71  C---QMLRQEISDILILMETRRSSFC 94
               ++LRQE SDI+ LMET+RS FC
Sbjct: 110 SLVKEVLRQEDSDIVFLMETKRSGFC 128

The following BLAST results are available for this feature:
BLAST of Csa7G396500 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5E7_CUCSA7.0e-45100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396500 PE=4 SV=1[more]
A0A0A0KNA2_CUCSA6.4e-0644.19Uncharacterized protein OS=Cucumis sativus GN=Csa_5G453180 PE=4 SV=1[more]
BLAST of Csa7G396500 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189702|gb|KGN44935.1|1.0e-44100.00hypothetical protein Csa_7G396500 [Cucumis sativus][more]
gi|700195933|gb|KGN51110.1|9.2e-0644.19hypothetical protein Csa_5G453180 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G396500.1Csa7G396500.1mRNA