Csa7G394590 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G394590
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 15016822 .. 15017189 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCTCTCAACACAACCAGTGATATCATGATTCAGTATGAACCAATCTTCTTCTTCATATCAATCCCTTACCGAAATCCCCTTAAATTTTCATCTGTTTTCTTGACGGATTCAACAAACCCAACTCCTCAAGTTTTCGATTCATTTGTTGATTTTTACAGTGACTTCTTACACACTGCTCTTTCTTTAATCTTCAGATTCACGTTTTGCATCTCTATCCCATCTCCTTCATTCGTTGACATTCCTTCCCCCACCATTCTTGTAACAGTTGGAAGCTGACTTATCTATCTTTATATTATTCCTTGTATCAGGATGAGGATATGCGCAACCTGTGCGCGATGCATCCAGATTTTTGTATGAGATAG

mRNA sequence

ATGGAATCTCTCAACACAACCAGTGATATCATGATTCAGTATGAACCAATCTTCTTCTTCATATCAATCCCTTACCGAAATCCCCTTAAATTTTCATCTGTTTTCTTGACGGATTCAACAAACCCAACTCCTCAAGTTTTCGATTCATTTGTTGATTTTTACAGTGACTTCTTACACACTGCTCTTTCTTTAATCTTCAGATTCACGTTTTGCATCTCTATCCCATCTCCTTCATTCGTTGACATTCCTTCCCCCACCATTCTTGATGAGGATATGCGCAACCTGTGCGCGATGCATCCAGATTTTTGTATGAGATAG

Coding sequence (CDS)

ATGGAATCTCTCAACACAACCAGTGATATCATGATTCAGTATGAACCAATCTTCTTCTTCATATCAATCCCTTACCGAAATCCCCTTAAATTTTCATCTGTTTTCTTGACGGATTCAACAAACCCAACTCCTCAAGTTTTCGATTCATTTGTTGATTTTTACAGTGACTTCTTACACACTGCTCTTTCTTTAATCTTCAGATTCACGTTTTGCATCTCTATCCCATCTCCTTCATTCGTTGACATTCCTTCCCCCACCATTCTTGATGAGGATATGCGCAACCTGTGCGCGATGCATCCAGATTTTTGTATGAGATAG

Protein sequence

MESLNTTSDIMIQYEPIFFFISIPYRNPLKFSSVFLTDSTNPTPQVFDSFVDFYSDFLHTALSLIFRFTFCISIPSPSFVDIPSPTILDEDMRNLCAMHPDFCMR*
Homology
[Close]
BLAST of Csa7G394590 vs. TrEMBL
Match: A0A0A0K587_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394590 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.4e-54
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1 

Query: 1   MESLNTTSDIMIQYEPIFFFISIPYRNPLKFSSVFLTDSTNPTPQVFDSFVDFYSDFLHT 60
           MESLNTTSDIMIQYEPIFFFISIPYRNPLKFSSVFLTDSTNPTPQVFDSFVDFYSDFLHT
Sbjct: 1   MESLNTTSDIMIQYEPIFFFISIPYRNPLKFSSVFLTDSTNPTPQVFDSFVDFYSDFLHT 60

Query: 61  ALSLIFRFTFCISIPSPSFVDIPSPTILDEDMRNLCAMHPDFCMR 106
           ALSLIFRFTFCISIPSPSFVDIPSPTILDEDMRNLCAMHPDFCMR
Sbjct: 61  ALSLIFRFTFCISIPSPSFVDIPSPTILDEDMRNLCAMHPDFCMR 105

[Close]
BLAST of Csa7G394590 vs. NCBI nr
Match: gi|700189657|gb|KGN44890.1| (hypothetical protein Csa_7G394590 [Cucumis sativus])

HSP 1 Score: 219.9 bits (559), Expect = 2.1e-54
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1 

Query: 1   MESLNTTSDIMIQYEPIFFFISIPYRNPLKFSSVFLTDSTNPTPQVFDSFVDFYSDFLHT 60
           MESLNTTSDIMIQYEPIFFFISIPYRNPLKFSSVFLTDSTNPTPQVFDSFVDFYSDFLHT
Sbjct: 1   MESLNTTSDIMIQYEPIFFFISIPYRNPLKFSSVFLTDSTNPTPQVFDSFVDFYSDFLHT 60

Query: 61  ALSLIFRFTFCISIPSPSFVDIPSPTILDEDMRNLCAMHPDFCMR 106
           ALSLIFRFTFCISIPSPSFVDIPSPTILDEDMRNLCAMHPDFCMR
Sbjct: 61  ALSLIFRFTFCISIPSPSFVDIPSPTILDEDMRNLCAMHPDFCMR 105

The following BLAST results are available for this feature:
BLAST of Csa7G394590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K587_CUCSA1.4e-54100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394590 PE=4 SV=1[more]
BLAST of Csa7G394590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189657|gb|KGN44890.1|2.1e-54100.00hypothetical protein Csa_7G394590 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G394590.1Csa7G394590.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G394590Melon (DHL92) v3.5.1cumeB532
Csa7G394590Watermelon (Charleston Gray)cuwcgB526
Csa7G394590Watermelon (97103) v1cuwmB568
Csa7G394590Watermelon (97103) v1cuwmB588
Csa7G394590Cucurbita pepo (Zucchini)cpecuB161
Csa7G394590Cucurbita pepo (Zucchini)cpecuB343
Csa7G394590Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G394590Cucumber (Gy14) v2cgybcuB323
Csa7G394590Melon (DHL92) v3.6.1cumedB511
Csa7G394590Silver-seed gourdcarcuB0119
Csa7G394590Silver-seed gourdcarcuB0876
Csa7G394590Watermelon (97103) v2cuwmbB539
Csa7G394590Watermelon (97103) v2cuwmbB572
Csa7G394590Wax gourdcuwgoB653
Csa7G394590Wax gourdcuwgoB654
Csa7G394590Wax gourdcuwgoB657
Csa7G394590Cucumber (Gy14) v1cgycuB519
Csa7G394590Cucurbita maxima (Rimu)cmacuB388
Csa7G394590Cucurbita maxima (Rimu)cmacuB914
Csa7G394590Cucurbita moschata (Rifu)cmocuB378
Csa7G394590Cucurbita moschata (Rifu)cmocuB900