Csa7G394580 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G394580
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Glutaredoxin; contains IPR011905 (Glutaredoxin-like, plant II), IPR012336 (Thioredoxin-like fold)
Location	Chr7 : 15014418 .. 15014726 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGATTGAGAAATTTGGCATCTCAGAAAGCAGTAGTGATTTTTTCCAAGAGCTCATGCTATATATGCCATAGCATCCAGACCCTCTTTTATGAGCTTGGTGCAAGCCCTGCAGTTCACGAGCTTGACCATGATGCAAATGGGCGAGAGATTGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCATCAGTTCCAGCTGTGTTCATAGGAGGAAAGTTTATAGGCTCAGCAAAAGATGTTATTTCTCTCCATGTTAATGGGGATCTGAAACAAATGCTGATAGATGCGAAGGCCATCTGGTTGTAA

mRNA sequence

ATGGATAGATTGAGAAATTTGGCATCTCAGAAAGCAGTAGTGATTTTTTCCAAGAGCTCATGCTATATATGCCATAGCATCCAGACCCTCTTTTATGAGCTTGGTGCAAGCCCTGCAGTTCACGAGCTTGACCATGATGCAAATGGGCGAGAGATTGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCATCAGTTCCAGCTGTGTTCATAGGAGGAAAGTTTATAGGCTCAGCAAAAGATGTTATTTCTCTCCATGTTAATGGGGATCTGAAACAAATGCTGATAGATGCGAAGGCCATCTGGTTGTAA

Coding sequence (CDS)

ATGGATAGATTGAGAAATTTGGCATCTCAGAAAGCAGTAGTGATTTTTTCCAAGAGCTCATGCTATATATGCCATAGCATCCAGACCCTCTTTTATGAGCTTGGTGCAAGCCCTGCAGTTCACGAGCTTGACCATGATGCAAATGGGCGAGAGATTGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCATCAGTTCCAGCTGTGTTCATAGGAGGAAAGTTTATAGGCTCAGCAAAAGATGTTATTTCTCTCCATGTTAATGGGGATCTGAAACAAATGCTGATAGATGCGAAGGCCATCTGGTTGTAA

Protein sequence

MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL*

Homology

[Close]

BLAST of Csa7G394580 vs. Swiss-Prot
Match: GRC11_ARATH (Glutaredoxin-C11 OS=Arabidopsis thaliana GN=GRXC11 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 6.5e-37
Identity = 74/103 (71.84%), Postives = 89/103 (86.41%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           M+R+R+L+S+KA VIF+KSSC +CHSI+TLFYELGASPA+HELD D  GRE++ ALR LG
Sbjct: 1   MERIRDLSSKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPEGREMERALRALG 60

Query: 61  -CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
             NP+VPAVF+GG++IGSAKD+IS HV+G LKQML DAKAIWL
Sbjct: 61  SSNPAVPAVFVGGRYIGSAKDIISFHVDGSLKQMLKDAKAIWL 103

[Close]

BLAST of Csa7G394580 vs. Swiss-Prot
Match: GRC12_ARATH (Putative glutaredoxin-C12 OS=Arabidopsis thaliana GN=GRXC12 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.0e-33
Identity = 69/103 (66.99%), Postives = 85/103 (82.52%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWAL-RGL 60
           M+R+R+LAS+KA VIF+KSSC +CHSI+TLFYELGASPA+HELD D  G +++ AL R  
Sbjct: 1   MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVF 60

Query: 61  GCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           G NP+VPAVF+GG+++GSAKDVIS HV+G LKQML  + AIWL
Sbjct: 61  GSNPAVPAVFVGGRYVGSAKDVISFHVDGSLKQMLKASNAIWL 103

[Close]

BLAST of Csa7G394580 vs. Swiss-Prot
Match: GRS10_ARATH (Monothiol glutaredoxin-S10 OS=Arabidopsis thaliana GN=GRXS10 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 5.9e-30
Identity = 60/102 (58.82%), Postives = 81/102 (79.41%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           MD +  LASQ+AVVIFSKS+C + H+I+ LFYE G SPA+ E+D D  G++I+WAL  LG
Sbjct: 1   MDVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VPAVF+GGKF+G+A  V++LH+NG LK +L +A A+WL
Sbjct: 61  CSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALWL 102

[Close]

BLAST of Csa7G394580 vs. Swiss-Prot
Match: GRXS3_ARATH (Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana GN=GRXS3 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.5e-25
Identity = 53/102 (51.96%), Postives = 74/102 (72.55%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           M+ L+ + S+K+VVIFSK+SC + H+I+TLF +LG +P ++ELD  + G+EI+ AL  LG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VP VFIGG+ +G A  V+SLH+N  L  ML  A A+WL
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Csa7G394580 vs. Swiss-Prot
Match: GRXS2_ARATH (Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana GN=GRXS2 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.2e-24
Identity = 53/102 (51.96%), Postives = 73/102 (71.57%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           MD +  +  ++ VVI+SKSSC + H+I+TL  + GA+PAV+ELD  + GREI+ AL  LG
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VP VFIGG+ +G A +V+SLH+NG L  ML  A A+W+
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of Csa7G394580 vs. TrEMBL
Match: A0A0A0K7M4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394580 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.5e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Csa7G394580 vs. TrEMBL
Match: V4TAX8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023999mg PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.1e-42
Identity = 83/101 (82.18%), Postives = 96/101 (95.05%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           MDR+R+LAS+KA VIF+KSSC +CHSI+TLFYELGASPA+HELD DANGREI+WALR LG
Sbjct: 1   MDRVRDLASKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDQDANGREIEWALRALG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGG+++GSAKDVISLHV+G LKQMLIDA+AIW
Sbjct: 61  CNPSVPAVFIGGRYVGSAKDVISLHVDGSLKQMLIDARAIW 101

[Close]

BLAST of Csa7G394580 vs. TrEMBL
Match: A0A067H8Q8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g037937mg PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.1e-42
Identity = 83/101 (82.18%), Postives = 96/101 (95.05%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           MDR+R+LAS+KA VIF+KSSC +CHSI+TLFYELGASPA+HELD DANGREI+WALR LG
Sbjct: 1   MDRVRDLASKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDQDANGREIEWALRALG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGG+++GSAKDVISLHV+G LKQMLIDA+AIW
Sbjct: 61  CNPSVPAVFIGGRYVGSAKDVISLHVDGSLKQMLIDARAIW 101

[Close]

BLAST of Csa7G394580 vs. TrEMBL
Match: A0A067K760_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13866 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.7e-42
Identity = 82/101 (81.19%), Postives = 96/101 (95.05%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           MDR+R+LAS +A VIF+KSSC +CHSI+TLFYELGASPA+HELD DANGRE++WALRGLG
Sbjct: 1   MDRVRDLASTRAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDRDANGREMEWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGK++GSAKDV+SLH++G LKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKYVGSAKDVLSLHLDGSLKQMLIDAKAIW 101

[Close]

BLAST of Csa7G394580 vs. TrEMBL
Match: A0A0D2QRX0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G130800 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 6.1e-42
Identity = 80/101 (79.21%), Postives = 98/101 (97.03%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           MD++R+LAS+KA VIF+KSSCY+C+SI+TLFYELGASPA+HELDHD +GR+++WALRGLG
Sbjct: 1   MDKVRDLASKKAAVIFTKSSCYMCYSIKTLFYELGASPAIHELDHDPSGRDMEWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           C+PSVPAVFIGG+F+GSAKDVISLHV+G LKQML+DAKAIW
Sbjct: 61  CDPSVPAVFIGGRFVGSAKDVISLHVDGSLKQMLMDAKAIW 101

[Close]

BLAST of Csa7G394580 vs. TAIR10
Match: AT3G62950.1 (AT3G62950.1 Thioredoxin superfamily protein)

HSP 1 Score: 154.5 bits (389), Expect = 3.7e-38
Identity = 74/103 (71.84%), Postives = 89/103 (86.41%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           M+R+R+L+S+KA VIF+KSSC +CHSI+TLFYELGASPA+HELD D  GRE++ ALR LG
Sbjct: 1   MERIRDLSSKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPEGREMERALRALG 60

Query: 61  -CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
             NP+VPAVF+GG++IGSAKD+IS HV+G LKQML DAKAIWL
Sbjct: 61  SSNPAVPAVFVGGRYIGSAKDIISFHVDGSLKQMLKDAKAIWL 103

[Close]

BLAST of Csa7G394580 vs. TAIR10
Match: AT2G47870.1 (AT2G47870.1 Thioredoxin superfamily protein)

HSP 1 Score: 142.9 bits (359), Expect = 1.1e-34
Identity = 69/103 (66.99%), Postives = 85/103 (82.52%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWAL-RGL 60
           M+R+R+LAS+KA VIF+KSSC +CHSI+TLFYELGASPA+HELD D  G +++ AL R  
Sbjct: 1   MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVF 60

Query: 61  GCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           G NP+VPAVF+GG+++GSAKDVIS HV+G LKQML  + AIWL
Sbjct: 61  GSNPAVPAVFVGGRYVGSAKDVISFHVDGSLKQMLKASNAIWL 103

[Close]

BLAST of Csa7G394580 vs. TAIR10
Match: AT3G21460.1 (AT3G21460.1 Glutaredoxin family protein)

HSP 1 Score: 131.3 bits (329), Expect = 3.3e-31
Identity = 60/102 (58.82%), Postives = 81/102 (79.41%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           MD +  LASQ+AVVIFSKS+C + H+I+ LFYE G SPA+ E+D D  G++I+WAL  LG
Sbjct: 1   MDVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VPAVF+GGKF+G+A  V++LH+NG LK +L +A A+WL
Sbjct: 61  CSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALWL 102

[Close]

BLAST of Csa7G394580 vs. TAIR10
Match: AT4G15700.1 (AT4G15700.1 Thioredoxin superfamily protein)

HSP 1 Score: 114.4 bits (285), Expect = 4.2e-26
Identity = 53/102 (51.96%), Postives = 74/102 (72.55%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           M+ L+ + S+K+VVIFSK+SC + H+I+TLF +LG +P ++ELD  + G+EI+ AL  LG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VP VFIGG+ +G A  V+SLH+N  L  ML  A A+WL
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Csa7G394580 vs. TAIR10
Match: AT5G18600.1 (AT5G18600.1 Thioredoxin superfamily protein)

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-25
Identity = 53/102 (51.96%), Postives = 73/102 (71.57%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           MD +  +  ++ VVI+SKSSC + H+I+TL  + GA+PAV+ELD  + GREI+ AL  LG
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VP VFIGG+ +G A +V+SLH+NG L  ML  A A+W+
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of Csa7G394580 vs. NCBI nr
Match: gi|449436547|ref|XP_004136054.1| (PREDICTED: glutaredoxin-C11 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 2.1e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Csa7G394580 vs. NCBI nr
Match: gi|567903510|ref|XP_006444243.1| (hypothetical protein CICLE_v10023999mg [Citrus clementina])

HSP 1 Score: 179.5 bits (454), Expect = 3.0e-42
Identity = 83/101 (82.18%), Postives = 96/101 (95.05%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           MDR+R+LAS+KA VIF+KSSC +CHSI+TLFYELGASPA+HELD DANGREI+WALR LG
Sbjct: 1   MDRVRDLASKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDQDANGREIEWALRALG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGG+++GSAKDVISLHV+G LKQMLIDA+AIW
Sbjct: 61  CNPSVPAVFIGGRYVGSAKDVISLHVDGSLKQMLIDARAIW 101

[Close]

BLAST of Csa7G394580 vs. NCBI nr
Match: gi|802688496|ref|XP_012082674.1| (PREDICTED: glutaredoxin-C11 [Jatropha curcas])

HSP 1 Score: 179.1 bits (453), Expect = 3.9e-42
Identity = 82/101 (81.19%), Postives = 96/101 (95.05%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           MDR+R+LAS +A VIF+KSSC +CHSI+TLFYELGASPA+HELD DANGRE++WALRGLG
Sbjct: 1   MDRVRDLASTRAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDRDANGREMEWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGK++GSAKDV+SLH++G LKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKYVGSAKDVLSLHLDGSLKQMLIDAKAIW 101

[Close]

BLAST of Csa7G394580 vs. NCBI nr
Match: gi|823181431|ref|XP_012488217.1| (PREDICTED: glutaredoxin-C11-like [Gossypium raimondii])

HSP 1 Score: 177.9 bits (450), Expect = 8.8e-42
Identity = 80/101 (79.21%), Postives = 98/101 (97.03%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           MD++R+LAS+KA VIF+KSSCY+C+SI+TLFYELGASPA+HELDHD +GR+++WALRGLG
Sbjct: 1   MDKVRDLASKKAAVIFTKSSCYMCYSIKTLFYELGASPAIHELDHDPSGRDMEWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           C+PSVPAVFIGG+F+GSAKDVISLHV+G LKQML+DAKAIW
Sbjct: 61  CDPSVPAVFIGGRFVGSAKDVISLHVDGSLKQMLMDAKAIW 101

[Close]

BLAST of Csa7G394580 vs. NCBI nr
Match: gi|255559310|ref|XP_002520675.1| (PREDICTED: glutaredoxin-C11 [Ricinus communis])

HSP 1 Score: 176.0 bits (445), Expect = 3.3e-41
Identity = 80/101 (79.21%), Postives = 96/101 (95.05%), Query Frame = 1


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60
           MDR+R+LAS +A VIF+KSSC +CHSI+TLFYELGASPA+HELD DANGRE++WALRGLG
Sbjct: 1   MDRVRDLASTRAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDRDANGREMEWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           C+PSVPAVFIGGK++GSAKDV+SLH++G LKQMLIDA+AIW
Sbjct: 61  CSPSVPAVFIGGKYVGSAKDVLSLHLDGSLKQMLIDARAIW 101

The following BLAST results are available for this feature:

BLAST of Csa7G394580 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRC11_ARATH	6.5e-37	71.84	Glutaredoxin-C11 OS=Arabidopsis thaliana GN=GRXC11 PE=3 SV=1	[more]
GRC12_ARATH	2.0e-33	66.99	Putative glutaredoxin-C12 OS=Arabidopsis thaliana GN=GRXC12 PE=3 SV=1	[more]
GRS10_ARATH	5.9e-30	58.82	Monothiol glutaredoxin-S10 OS=Arabidopsis thaliana GN=GRXS10 PE=3 SV=1	[more]
GRXS3_ARATH	7.5e-25	51.96	Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana GN=GRXS3 PE=3 SV=1	[more]
GRXS2_ARATH	2.2e-24	51.96	Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana GN=GRXS2 PE=3 SV=1	[more]

BLAST of Csa7G394580 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7M4_CUCSA	1.5e-51	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394580 PE=4 SV=1	[more]
V4TAX8_9ROSI	2.1e-42	82.18	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023999mg PE=4 SV=1	[more]
A0A067H8Q8_CITSI	2.1e-42	82.18	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g037937mg PE=4 SV=1	[more]
A0A067K760_JATCU	2.7e-42	81.19	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13866 PE=4 SV=1	[more]
A0A0D2QRX0_GOSRA	6.1e-42	79.21	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G130800 PE=4 SV=1	[more]

BLAST of Csa7G394580 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G62950.1	3.7e-38	71.84	Thioredoxin superfamily protein	[more]
AT2G47870.1	1.1e-34	66.99	Thioredoxin superfamily protein	[more]
AT3G21460.1	3.3e-31	58.82	Glutaredoxin family protein	[more]
AT4G15700.1	4.2e-26	51.96	Thioredoxin superfamily protein	[more]
AT5G18600.1	1.2e-25	51.96	Thioredoxin superfamily protein	[more]

BLAST of Csa7G394580 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449436547\|ref\|XP_004136054.1\|	2.1e-51	100.00	PREDICTED: glutaredoxin-C11 [Cucumis sativus]	[more]
gi\|567903510\|ref\|XP_006444243.1\|	3.0e-42	82.18	hypothetical protein CICLE_v10023999mg [Citrus clementina]	[more]
gi\|802688496\|ref\|XP_012082674.1\|	3.9e-42	81.19	PREDICTED: glutaredoxin-C11 [Jatropha curcas]	[more]
gi\|823181431\|ref\|XP_012488217.1\|	8.8e-42	79.21	PREDICTED: glutaredoxin-C11-like [Gossypium raimondii]	[more]
gi\|255559310\|ref\|XP_002520675.1\|	3.3e-41	79.21	PREDICTED: glutaredoxin-C11 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002109	Glutaredoxin
IPR011905	GlrX-like_pln_2
IPR012336	Thioredoxin-like_fold
IPR014025	Glutaredoxin_subgr

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005623	cell
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU115487	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa7G394580.1	Csa7G394580.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU115487	CU115487	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 13..75 score: 2.4
IPR002109	Glutaredoxin	PROFILE	PS51354	GLUTAREDOXIN_2	coord: 1..101 score: 19
IPR011905	Glutaredoxin-like, plant II	TIGRFAMs	TIGR02189	TIGR02189	coord: 5..102 score: 2.2
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 3..101 score: 1.5
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 1..101 score: 1.47
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 72..85 score: 7.2E-6coord: 13..31 score: 7.2E-6coord: 58..71 score: 7.
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 1..102 score: 3.5
None	No IPR available	PANTHER	PTHR10168:SF118	GLUTAREDOXIN-C11-RELATED	coord: 1..102 score: 3.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa7G394580	Cla014693	Watermelon (97103) v1	cuwmB568
Csa7G394580	MELO3C016055	Melon (DHL92) v3.5.1	cumeB532
Csa7G394580	MELO3C016055.2	Melon (DHL92) v3.6.1	cumedB511
Csa7G394580	Cla97C09G168870	Watermelon (97103) v2	cuwmbB572
Csa7G394580	BhiUN245G48	Wax gourd	cuwgoB654
Csa7G394580	CSPI07G17050	Wild cucumber (PI 183967)	cpicuB354
Csa7G394580	Cucsa.025240	Cucumber (Gy14) v1	cgycuB519
Csa7G394580	CmaCh08G003940	Cucurbita maxima (Rimu)	cmacuB914
Csa7G394580	CmaCh17G011230	Cucurbita maxima (Rimu)	cmacuB388
Csa7G394580	CmoCh17G010980	Cucurbita moschata (Rifu)	cmocuB378
Csa7G394580	CmoCh08G003890	Cucurbita moschata (Rifu)	cmocuB900
Csa7G394580	Cp4.1LG17g06960	Cucurbita pepo (Zucchini)	cpecuB343
Csa7G394580	CsGy7G015490	Cucumber (Gy14) v2	cgybcuB323

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa7G394580	Wax gourd	cuwgoB653
Csa7G394580	Wax gourd	cuwgoB657
Csa7G394580	Watermelon (Charleston Gray)	cuwcgB526
Csa7G394580	Watermelon (97103) v1	cuwmB588
Csa7G394580	Cucurbita pepo (Zucchini)	cpecuB161
Csa7G394580	Bottle gourd (USVL1VR-Ls)	culsiB503
Csa7G394580	Silver-seed gourd	carcuB0119
Csa7G394580	Silver-seed gourd	carcuB0876
Csa7G394580	Watermelon (97103) v2	cuwmbB539