Csa7G368120 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G368120
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
Description21 kDa protein, putative; contains IPR006501 (Pectinesterase inhibitor)
LocationChr7 : 12963020 .. 12963346 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCCTCTCTTCTTCCTTCTCCCATGGCTAACCCACTCTGCCAAAATGAGCTATGTCCAAGAAGCCTGCAAGGTAACACGACACCAAGATCTCATTCGATCCTTGTCGAAATTTTTAAGCACCGTCAAGCTAAGGGCCACAAAATGGGCTCGAACAAGGGTGTCAGTGACGATAATAAAGATAAAAAAAGTGACAGAACTCCCAAAGAGGTTGAAGAACAACAAGCGGATGAAGGGGAGAAACATGACAAAAGTTTGGAACTGTGTGGAGGTGTTTGAAGCCGCCATGATGAGCCTCACAGGTCGTTTAGGGTTCTTAGAAGATTGA

mRNA sequence

ATGAGCTATGTCCAAGAAGCCTGCAAGGTAACACGACACCAAGATCTCATTCGATCCTTGTCGAAATTTTTAAGCACCGTCAAGCTAAGGGCCACAAAATGGGCTCGAACAAGGGTGTCAGTGACGATAATAAAGATAAAAAAAGTGACAGAACTCCCAAAGAGGTTGAAGAACAACAAGCGGATGAAGGGGAGAAACATGACAAAAGTTTGGAACTGTGTGGAGGTGTTTGAAGCCGCCATGATGAGCCTCACAGGTCGTTTAGGGTTCTTAGAAGATTGA

Coding sequence (CDS)

ATGAGCTATGTCCAAGAAGCCTGCAAGGTAACACGACACCAAGATCTCATTCGATCCTTGTCGAAATTTTTAAGCACCGTCAAGCTAAGGGCCACAAAATGGGCTCGAACAAGGGTGTCAGTGACGATAATAAAGATAAAAAAAGTGACAGAACTCCCAAAGAGGTTGAAGAACAACAAGCGGATGAAGGGGAGAAACATGACAAAAGTTTGGAACTGTGTGGAGGTGTTTGAAGCCGCCATGATGAGCCTCACAGGTCGTTTAGGGTTCTTAGAAGATTGA

Protein sequence

MSYVQEACKVTRHQDLIRSLSKFLSTVKLRATKWARTRVSVTIIKIKKVTELPKRLKNNKRMKGRNMTKVWNCVEVFEAAMMSLTGRLGFLED*
Homology
[Close]
BLAST of Csa7G368120 vs. TrEMBL
Match: A0A0A0K6V7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368120 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.0e-44
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1 

Query: 1  MSYVQEACKVTRHQDLIRSLSKFLSTVKLRATKWARTRVSVTIIKIKKVTELPKRLKNNK 60
          MSYVQEACKVTRHQDLIRSLSKFLSTVKLRATKWARTRVSVTIIKIKKVTELPKRLKNNK
Sbjct: 1  MSYVQEACKVTRHQDLIRSLSKFLSTVKLRATKWARTRVSVTIIKIKKVTELPKRLKNNK 60

Query: 61 RMKGRNMTKVWNCVEVFEAAMMSLTGRLGFLED 94
          RMKGRNMTKVWNCVEVFEAAMMSLTGRLGFLED
Sbjct: 61 RMKGRNMTKVWNCVEVFEAAMMSLTGRLGFLED 93

[Close]
BLAST of Csa7G368120 vs. TrEMBL
Match: A0A0A0KAX0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G397050 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.1e-20
Identity = 60/91 (65.93%), Postives = 65/91 (71.43%), Query Frame = 1 

Query: 2   SYVQEACKVTRHQDL-IRSLSKFLSTVKLRATKWARTRVSVTIIKIKKVTELPKRLKNNK 61
           SYVQEAC+VTRHQDL I+SLS F S  K   TKWAR  VSVTI + KKV  L  RLKNNK
Sbjct: 31  SYVQEACRVTRHQDLCIQSLSPFSSAAKRSPTKWARAGVSVTITEAKKVAGLLGRLKNNK 90

Query: 62  RMKGRNMTKVWNCVEVFEAAMMSLTGRLGFL 92
           RMKGRN   V +CVEVFEAA+  L   LG L
Sbjct: 91  RMKGRNRAAVLDCVEVFEAAIDELHRSLGVL 121

[Close]
BLAST of Csa7G368120 vs. TrEMBL
Match: A0A067JZE1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13934 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.9e-11
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 1 

Query: 2   SYVQEACKVTRHQDL-IRSLSKFLSTVKLRATKWARTRVSVTIIKIKKVTELPKRLKNNK 61
           +YV++AC VTR+QDL I SL+ F  T K   TKWAR  VSVTI + K VT+  K+LK  K
Sbjct: 33  TYVRDACSVTRYQDLCIHSLAAFSQTAKRSPTKWARAAVSVTISEAKNVTQYLKKLKKYK 92

Query: 62  RMK-GRNMTKVWNCVEVFEAAMMSLTGRLGFLED 94
            ++  RN   + +C+E FE  + +L   LG L +
Sbjct: 93  LIRSSRNRIAIADCIECFEDTLDNLHRSLGVLRN 126

[Close]
BLAST of Csa7G368120 vs. TrEMBL
Match: I3SDE4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-10
Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 1 

Query: 2   SYVQEACKVTRHQDL-IRSLSKFLSTVKLRATKWARTRVSVTIIKIKKVTELPKRLKNNK 61
           S V+EAC VTR+Q+L I +LS F +T     +KWAR  VSVTI ++K V     +LK NK
Sbjct: 34  SNVREACSVTRYQNLCIHTLSHFSNTAGTSPSKWARAGVSVTITEVKNVQAYLTKLKKNK 93

Query: 62  R-MKGRNMTKVWNCVEVFEAAMMSLTGRLGFL 92
           R MKGRN   + +CVE F  A+  L   LG L
Sbjct: 94  RMMKGRNRAALSDCVECFADALDELHRSLGVL 125

[Close]
BLAST of Csa7G368120 vs. TrEMBL
Match: A0A103XPN9_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_003456 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-10
Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 1 

Query: 2   SYVQEACKVTRHQDL-IRSLSKFLSTVKLRATKWARTRVSVTIIKIKKVTELPKRLKNNK 61
           SYV +AC VTR+QDL I SL+ + +  K   +KWAR  VSVTI + K  T     LK   
Sbjct: 31  SYVLDACSVTRYQDLCIHSLASYSNIAKKDPSKWARAGVSVTIGETKNTTRYLVALKKRN 90

Query: 62  RMKGRNMTKVWNCVEVFEAAMMSLTGRLGFL 92
           R+KGRN   +++C+EVF+  + +L   LG L
Sbjct: 91  RLKGRNRMALFDCLEVFQDTLDNLHKSLGVL 121

[Close]
BLAST of Csa7G368120 vs. TAIR10
Match: AT3G62820.1 (AT3G62820.1 Plant invertase/pectin methylesterase inhibitor superfamily protein)

HSP 1 Score: 48.1 bits (113), Expect = 3.4e-06
Identity = 37/92 (40.22%), Postives = 46/92 (50.00%), Query Frame = 1 

Query: 2   SYVQEACKVTRHQDL-IRSLSKFLSTVKLRATKWARTRVSVTIIKIKKVTELPKRLKNNK 61
           SYVQ AC VTR+QDL  ++L  F S  K   +KWAR  VSV I   K V  L   LK   
Sbjct: 32  SYVQNACSVTRYQDLCAKTLLPFASVAKNSPSKWARAGVSVAITDNKDV--LRHLLKTRL 91

Query: 62  RMKG-RNMTKVWNCVEVFEAAMMSLTGRLGFL 92
              G R+   + +C E+ + ++ SL   L  L
Sbjct: 92  STIGKRDRIALSDCRELLQDSLDSLHKSLAVL 121

[Close]
BLAST of Csa7G368120 vs. NCBI nr
Match: gi|700189426|gb|KGN44659.1| (hypothetical protein Csa_7G368120 [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 2.9e-44
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1 

Query: 1  MSYVQEACKVTRHQDLIRSLSKFLSTVKLRATKWARTRVSVTIIKIKKVTELPKRLKNNK 60
          MSYVQEACKVTRHQDLIRSLSKFLSTVKLRATKWARTRVSVTIIKIKKVTELPKRLKNNK
Sbjct: 1  MSYVQEACKVTRHQDLIRSLSKFLSTVKLRATKWARTRVSVTIIKIKKVTELPKRLKNNK 60

Query: 61 RMKGRNMTKVWNCVEVFEAAMMSLTGRLGFLED 94
          RMKGRNMTKVWNCVEVFEAAMMSLTGRLGFLED
Sbjct: 61 RMKGRNMTKVWNCVEVFEAAMMSLTGRLGFLED 93

[Close]
BLAST of Csa7G368120 vs. NCBI nr
Match: gi|778728057|ref|XP_011659361.1| (PREDICTED: 21 kDa protein [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 3.0e-20
Identity = 60/91 (65.93%), Postives = 65/91 (71.43%), Query Frame = 1 

Query: 2   SYVQEACKVTRHQDL-IRSLSKFLSTVKLRATKWARTRVSVTIIKIKKVTELPKRLKNNK 61
           SYVQEAC+VTRHQDL I+SLS F S  K   TKWAR  VSVTI + KKV  L  RLKNNK
Sbjct: 31  SYVQEACRVTRHQDLCIQSLSPFSSAAKRSPTKWARAGVSVTITEAKKVAGLLGRLKNNK 90

Query: 62  RMKGRNMTKVWNCVEVFEAAMMSLTGRLGFL 92
           RMKGRN   V +CVEVFEAA+  L   LG L
Sbjct: 91  RMKGRNRAAVLDCVEVFEAAIDELHRSLGVL 121

[Close]
BLAST of Csa7G368120 vs. NCBI nr
Match: gi|659101359|ref|XP_008451567.1| (PREDICTED: 21 kDa protein [Cucumis melo])

HSP 1 Score: 104.8 bits (260), Expect = 8.6e-20
Identity = 59/91 (64.84%), Postives = 65/91 (71.43%), Query Frame = 1 

Query: 2   SYVQEACKVTRHQDL-IRSLSKFLSTVKLRATKWARTRVSVTIIKIKKVTELPKRLKNNK 61
           SYVQEAC+VT HQDL I+SLS F ST K   TKWAR  VSVTI + KKV  L  RLKNNK
Sbjct: 31  SYVQEACRVTLHQDLCIQSLSPFSSTAKRSPTKWARAGVSVTITEAKKVAALLGRLKNNK 90

Query: 62  RMKGRNMTKVWNCVEVFEAAMMSLTGRLGFL 92
           RMKGRN   V +CVEVF+AA+  L   LG L
Sbjct: 91  RMKGRNRAAVLDCVEVFDAAIDELHRSLGVL 121

[Close]
BLAST of Csa7G368120 vs. NCBI nr
Match: gi|802688839|ref|XP_012082770.1| (PREDICTED: 21 kDa protein-like [Jatropha curcas])

HSP 1 Score: 75.5 bits (184), Expect = 5.6e-11
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 1 

Query: 2   SYVQEACKVTRHQDL-IRSLSKFLSTVKLRATKWARTRVSVTIIKIKKVTELPKRLKNNK 61
           +YV++AC VTR+QDL I SL+ F  T K   TKWAR  VSVTI + K VT+  K+LK  K
Sbjct: 33  TYVRDACSVTRYQDLCIHSLAAFSQTAKRSPTKWARAAVSVTISEAKNVTQYLKKLKKYK 92

Query: 62  RMK-GRNMTKVWNCVEVFEAAMMSLTGRLGFLED 94
            ++  RN   + +C+E FE  + +L   LG L +
Sbjct: 93  LIRSSRNRIAIADCIECFEDTLDNLHRSLGVLRN 126

[Close]
BLAST of Csa7G368120 vs. NCBI nr
Match: gi|697123758|ref|XP_009615877.1| (PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis])

HSP 1 Score: 75.5 bits (184), Expect = 5.6e-11
Identity = 40/91 (43.96%), Postives = 58/91 (63.74%), Query Frame = 1 

Query: 2   SYVQEACKVTRHQDL-IRSLSKFLSTVKLRATKWARTRVSVTIIKIKKVTELPKRLKNNK 61
           SYV++AC VTR+QD+ + SL+ F ST K   +KWAR  VSVT+ + K VT+   +LK + 
Sbjct: 28  SYVRDACSVTRYQDICMHSLASFSSTAKNNPSKWARVGVSVTLSQAKGVTQSLLKLKKHN 87

Query: 62  RMKGRNMTKVWNCVEVFEAAMMSLTGRLGFL 92
            +KGR    + +C E F+ A+ +L   LG L
Sbjct: 88  SLKGRGRVALLDCAECFQDALDNLHNSLGVL 118

The following BLAST results are available for this feature:
BLAST of Csa7G368120 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6V7_CUCSA2.0e-44100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368120 PE=4 SV=1[more]
A0A0A0KAX0_CUCSA2.1e-2065.93Uncharacterized protein OS=Cucumis sativus GN=Csa_7G397050 PE=4 SV=1[more]
A0A067JZE1_JATCU3.9e-1145.74Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13934 PE=4 SV=1[more]
I3SDE4_LOTJA1.1e-1048.91Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
A0A103XPN9_CYNCS1.1e-1045.05Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_003456 PE=4 ... [more]
BLAST of Csa7G368120 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G62820.13.4e-0640.22 Plant invertase/pectin methylesterase inhibitor superfamily protein[more]
BLAST of Csa7G368120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189426|gb|KGN44659.1|2.9e-44100.00hypothetical protein Csa_7G368120 [Cucumis sativus][more]
gi|778728057|ref|XP_011659361.1|3.0e-2065.93PREDICTED: 21 kDa protein [Cucumis sativus][more]
gi|659101359|ref|XP_008451567.1|8.6e-2064.84PREDICTED: 21 kDa protein [Cucumis melo][more]
gi|802688839|ref|XP_012082770.1|5.6e-1145.74PREDICTED: 21 kDa protein-like [Jatropha curcas][more]
gi|697123758|ref|XP_009615877.1|5.6e-1143.96PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006501Pectinesterase_inhib_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004857enzyme inhibitor activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043086 negative regulation of catalytic activity
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004857 enzyme inhibitor activity
molecular_function GO:0030599 pectinesterase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G368120.1Csa7G368120.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006501Pectinesterase inhibitor domainGENE3DG3DSA:1.20.140.40coord: 2..85
score: 3.
IPR006501Pectinesterase inhibitor domainunknownSSF101148Plant invertase/pectin methylesterase inhibitorcoord: 2..86
score: 2.2
NoneNo IPR availablePANTHERPTHR31080FAMILY NOT NAMEDcoord: 2..91
score: 1.9
NoneNo IPR availablePANTHERPTHR31080:SF16SUBFAMILY NOT NAMEDcoord: 2..91
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G368120Cucsa.387800Cucumber (Gy14) v1cgycuB545
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G368120Cucurbita pepo (Zucchini)cpecuB157
Csa7G368120Cucurbita pepo (Zucchini)cpecuB337
Csa7G368120Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G368120Cucumber (Gy14) v2cgybcuB323
Csa7G368120Melon (DHL92) v3.6.1cumedB502
Csa7G368120Silver-seed gourdcarcuB0013
Csa7G368120Silver-seed gourdcarcuB0095
Csa7G368120Watermelon (97103) v2cuwmbB571
Csa7G368120Wax gourdcuwgoB705
Csa7G368120Cucurbita maxima (Rimu)cmacuB384
Csa7G368120Cucurbita maxima (Rimu)cmacuB914
Csa7G368120Cucurbita moschata (Rifu)cmocuB374
Csa7G368120Cucurbita moschata (Rifu)cmocuB900
Csa7G368120Melon (DHL92) v3.5.1cumeB523
Csa7G368120Watermelon (Charleston Gray)cuwcgB525
Csa7G368120Watermelon (97103) v1cuwmB567