Csa7G342800 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G342800
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Spindle and kinetochore-associated protein 1 homolog; contains IPR009829 (Protein of unknown function DUF1395)
Location	Chr7 : 12405725 .. 12409751 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGGAAGGTTAACAGTTGACAAGGTCAATGCTGCTGTTTATGACATGGCAACATATGCAGAAGCAAATGCCCAACTTATTGGCATCCCCAAAAAAAAAGTTAGTGTCAAATTCTCTCATTTAAAAAGCATATTGATAACCACCATTTCACTTATAAGTTATATGCTGACAATGACTACTTTTTCTAAAGCTGGCAGAGAACCTTTGGGAAAAGGCCCTGGTAAGTTCACTAACAATTTTTTTCCACATCTCTTTTTATTTGCTTCTTCGTTTCTGCTTCGTTTTTGCATTGATGCTTGCAAAACTTACTGTAGGCATGTAGGTTCTAGGCAGACTTGCTACTGAAGATGTTGCATAATTTATTTACAAATATTAAAATATTATTTAAAGGTAAAACATCAAAGGAACTTGTAGAATCAGATGGCTGTTCTGCCTGAGTTTCAAGTAGATGCCATCCAGAAAATGAAATATTTTGCCCATTTTACTCGAGAACTTGGGAATCTCTCTGTATCAATTTGGCAAAGTTGTATGGAGGAAAAAACTGTAAAGCGGAGCATTATTTTGGAGGAGTAACGAGTTGTTTGATCGTGTGCATACCAGTCTTGGAGATGGGGTGGGGATGGTGGAGGTAGCAACAAAGATCATGATGAAGAGTTGCCTGTAAAATATTAGGGTTAGATATTAGTCTGGTTTTATATTTGTAGGCACCCTCTAAAAGTTTAAGGCAAACACTAACAATTTTAGAAAATTCACGAAATATTTACACATATAGCTTAACTTTAAATATTAGAAACTTCTAGGTTTATCTAGAAGATTGTAAATAAACATCTCATAGAAAAATATAGAAATATCTTTGGGTTTCTTTAGGCATCATGTAGAATTCTTTTAGATAAGGACAATCCATAGAAACATCTAGAGTATTTGTAGAATCTAAGAACCCAGGGAGATTCTTTTACTTTGGGCTTCAGGATCCTCATGACTATGGGAAGAAAGAAAGCAAAGAAAGCGAGTTAGATAAACTTAGAGTGAAAAGTGAGTGTGAGTTTCGAGAAGGGAAAGTATTCTCTAAAAAATGTCAATCTGTGTACATTCTTGATAAAAGGTTCTTTCTTACAAGTGATTGTTTTAGTTTCATTTGTGCCATTTTCTTCAACATGCTCAAGTATTCAAGTCTGTACAATGTTTCGATGTGGTGGAGAGTGTACCTCTGCTTTTATTCAATGCTCTTTATACAGAGATGGGGCTTGGAGCAGCACCATTAAAGACCAGCTACTTGATGGTGCTTTGCATGTGGTTGGGTGAGGTTACTACGGTGGTGTAGCTAAGTAATCATAGTAGGGTGGTAGCACCCCTCTTGTCACTTTAAGCGTTATGCTAGATTAAGGATGATTACATTGCATTGGATGGCCTCAAGTCAGTATTTGGTTCACTTGTGGCTACGGTGCTGATTGGTCAAATCACATATGGCCAACTTACTCTGTTTTGCGCCGGACTAGACCTAGCTGGGCTAGAGCTTATGAATGACTTTTTCAATTGGTGGTAGGAGGATGAGAAAGGTTTCCCCATCCCTATCCTTGCTCTCTAAAAACATTTCCTGTCGTGAAGTTCTGCCAAAGGCTCTCATAATCACTTTGAATTCTCTCTAAATTAGTCCCAACGGGGCCCTTAAATGCAGCACTTTTTTAAGTGTTTGGGGTGATTGATTCAATTGAAAAGAGAGAACGACAGAAGAGATAGCATGGACCAGGTAGGTCTGCATGATTCTCTAAGGGTTGCATAAAAATAAACAGTTGAGGCATTCTCACCATACGAAAACGTCATCAAGGTTTAGACTTAATTAAGTGCGTGGGGAAGCATGTTTGAGCTGTCTTACAACACCCCTATCACTACCTTTTAGTATTGTCACCTCACCCTTGACGGGACTAATCTGCACAACGTAAGCCAATTGTTTGTCCAAAATCACGGCCCTGACCCACTCCCAACGACAAAAGGATTCCTATCCTTGTGCCTGTGGATGGTTGCAAATTCTAGCCCAGGGCAGGAATTTGTTTCTAATTTGATGGGAAATCCTTGATCGTGTGGTATTTCATGGGGAGAAAATTCCTTCAGCACCATACTGAGTGACAACCAGTGGTTGATGGGGTCAAATGATGTTGGTGAATGTAAACACAGCAATATGTGATGGAAATAAGTAGAAGATGCAGATGCCTGGCGAGCGACAGTAATGGTGCTTGGTGAGTCGGAGAAAGCAAACAATAATACTGTTTGGCAATTGGCAAATGGGCGACAGCAGGTGGCAGCTGGTAGTAATATCCCTCTTAGTCCTCAAATCTCTTCTGGCACGTGAAAAGTGTAGAAACAAAGTTTAAAGAATGAAAAAAAAGGGGAAAAAAGAAAATACACAAAAATGTAGGATGGGAAGAAATGAAGGGGTTAGAGTTTCAAAGTTGAAATAACAATAGCAAATAAAATTATAAAAAGGGCCAAAAAAGTGGTTAAATTAATAGAAGTAAATATCAACATTGTTCTTTCCACCATATGATTGAAAAGTGTTATTTCCTTTCAAAAACAAAAAAGAAAAAAAAGAAAAAATATCAACATTGTTCTCCAATCTGGTCAAACTGGGGATTCCTATGGATAACCACACGGTGTCAGGGACCTGAAACCATGTTTTTCTTCTTTTCCTCCTTGTCCATTTCTTCAAGATACCATGTTTTTATTTCTGATACATGCAGGAGCTAAGAGATATTGCAACAACCAATGCAGTGAAAGGAAAATATTTCTTTCTTGAAACAGACATGAAAGGACCTTCATTGAAACTTGACAATACTGGAAAGGCCATTCTAACTGTAAGTTTGTTAAATATAATTAGCTCTCAGCCATCATAGATTCATTGCTATTTTGGAGATAATACCAAAAGTTCATTCATCTAACTCATAGTTTTGTTTCTATTTGACAACCATTCTTTTTAGTTTTTTAAAATTATACTTGTTTCCTCTCAATTATGCACATATATATAGATATATACACACGTATACATATAAAAATACACACACACATATACACACATATCCATATACACATATACATATATATACATATACACACACACACACCTTAAGTTTTTCATCGTCTTTAAAAGTGGATTTGAATTCTAATTCAAATAAAAAAACATAATTAAGTTTTTGAATATTACTTTTTATAGTTTTAAAATTTTGGTTTTTTTTTATTTTTATTTATTTATAAAACGGTTTAAAAATTATCTAATAAAACAAGAAAGTTATAGGTAGAAGTAGCGTCTATAAACTTAATTTTTCATAACATAAAACTAAAAAGAACATGGATATCAATAAGGTCTTTGTGTATACTATGACTGGTATAATACTTCCTGTCAATGTTTGAAACAATGGTTTCATTTACGATTTCATATAATAATGAACCTAGGATATACAGTGCAGATTAAAATATATCAACTTTTCTACCCTTACAGGTCTTACGTCACCTTGGACGCATAAGCGAGACTCGGATTGGACATCAGCGAGTAATCTTATTATTAAAACCATCATAAACAACCTAGGATTTAGGTGGACACAAGACTACCGAGTCTTGCATCAACAGAGTATAGCCTGTAGAAGAGAATCCACTGTACAATTCCAGCAATCCATTTCTCAAGGATTTGTCAGCAGATGAGTACAACCGATTGTTTTGGAGAAGGTTAGACAATCTTAGAATGCTGAGTTATATGGCCTGTCTTTGATTATCATCAAAAAAATTCTCAAATCGAAGCGAGAGGTTGTTATCTCTATAGTTTAATGGTTGCTTGTAATCAGTTGCAAGGAGCTTATTTCTGCTTAGATTTTCAACGTGACTTCTTTTCAATTAGGCCAACGTTTGTACCTACATTCTTGTGCCGTTAAGATTAGAGTTCTAAGATACTGAAGTTTTCGGGACATACTTATGTAATTTGAAAGCAAATTCTAAAGAATGGGTAGTTTTGGCGAAAAGCCAAAGAAAACAGAGGCTG

mRNA sequence

ATGAGAGGAAGGTTAACAGTTGACAAGGTCAATGCTGCTGTTTATGACATGGCAACATATGCAGAAGCAAATGCCCAACTTATTGGCATCCCCAAAAAAAAACTGGCAGAGAACCTTTGGGAAAAGGCCCTGGAGCTAAGAGATATTGCAACAACCAATGCAGTGAAAGGAAAATATTTCTTTCTTGAAACAGACATGAAAGGACCTTCATTGAAACTTGACAATACTGGAAAGGCCATTCTAACTGTCTTACGTCACCTTGGACGCATAAGCGAGACTCGGATTGGACATCAGCGACCTGTAGAAGAGAATCCACTGTACAATTCCAGCAATCCATTTCTCAAGGATTTGTCAGCAGATGAGTACAACCGATTGTTTTGGAGAAGGTTAGACAATCTTAGAATGCTGAGTTATATGGCCTGTCTTTGA

Coding sequence (CDS)

ATGAGAGGAAGGTTAACAGTTGACAAGGTCAATGCTGCTGTTTATGACATGGCAACATATGCAGAAGCAAATGCCCAACTTATTGGCATCCCCAAAAAAAAACTGGCAGAGAACCTTTGGGAAAAGGCCCTGGAGCTAAGAGATATTGCAACAACCAATGCAGTGAAAGGAAAATATTTCTTTCTTGAAACAGACATGAAAGGACCTTCATTGAAACTTGACAATACTGGAAAGGCCATTCTAACTGTCTTACGTCACCTTGGACGCATAAGCGAGACTCGGATTGGACATCAGCGACCTGTAGAAGAGAATCCACTGTACAATTCCAGCAATCCATTTCTCAAGGATTTGTCAGCAGATGAGTACAACCGATTGTTTTGGAGAAGGTTAGACAATCTTAGAATGCTGAGTTATATGGCCTGTCTTTGA

Protein sequence

MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYFFLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRPVEENPLYNSSNPFLKDLSADEYNRLFWRRLDNLRMLSYMACL*

Homology

[Close]

BLAST of Csa7G342800 vs. Swiss-Prot
Match: SKA1_ARATH (Spindle and kinetochore-associated protein 1 homolog OS=Arabidopsis thaliana GN=At3g60660 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.1e-39
Identity = 82/101 (81.19%), Postives = 88/101 (87.13%), Query Frame = 1


Query: 1   MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 60
           MRGRLT++KVNAA+ DMA+YAEANA LI   K+KLAENLWEKAL+LRDI T  AVKGK+F
Sbjct: 166 MRGRLTLEKVNAAINDMASYAEANAHLIAASKQKLAENLWEKALKLRDIVTEQAVKGKHF 225

Query: 61  FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRPV 102
           FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIG  R +
Sbjct: 226 FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGQNRVI 266

[Close]

BLAST of Csa7G342800 vs. Swiss-Prot
Match: SKA1_MAIZE (Spindle and kinetochore-associated protein 1 homolog OS=Zea mays PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.0e-35
Identity = 71/99 (71.72%), Postives = 82/99 (82.83%), Query Frame = 1


Query: 1   MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 60
           MRGRLT++KVN A+ ++A+YA+ANA L+  PKKKL+E+ WEKALELRDIA + AVKG +F
Sbjct: 167 MRGRLTLEKVNIAINEVASYADANAHLVTCPKKKLSEDTWEKALELRDIAASGAVKGNHF 226

Query: 61  FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQR 100
           FLE D+KGP LKLDNTGKAILTVLRHLGR  E RIGH R
Sbjct: 227 FLEADIKGPGLKLDNTGKAILTVLRHLGRFHEVRIGHHR 265

[Close]

BLAST of Csa7G342800 vs. Swiss-Prot
Match: SKA1_ORYSJ (Spindle and kinetochore-associated protein 1 homolog OS=Oryza sativa subsp. japonica GN=Os07g0484500 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.0e-35
Identity = 70/99 (70.71%), Postives = 82/99 (82.83%), Query Frame = 1


Query: 1   MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 60
           MRGRLT++KVN A+ ++A+YA+ NA L+  PKKKL+E+ WEKALELRDIA   +VKG++F
Sbjct: 170 MRGRLTLEKVNIAINEVASYADGNAHLVACPKKKLSEDTWEKALELRDIAARESVKGRHF 229

Query: 61  FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQR 100
           FLETD+KGP LKLD TGKAILTVLRHLGR  ETRIGH R
Sbjct: 230 FLETDIKGPGLKLDTTGKAILTVLRHLGRFQETRIGHHR 268

[Close]

BLAST of Csa7G342800 vs. Swiss-Prot
Match: SKA1_ORYSI (Spindle and kinetochore-associated protein 1 homolog OS=Oryza sativa subsp. indica GN=OsI_26011 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.4e-34
Identity = 70/99 (70.71%), Postives = 81/99 (81.82%), Query Frame = 1


Query: 1   MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 60
           MRGRLT++KVN A+ ++A+YA+ NA L+  PKKKL+E+ WEKAL LRDIA   +VKGK+F
Sbjct: 170 MRGRLTLEKVNIAINEVASYADGNAHLVACPKKKLSEDTWEKALVLRDIAARESVKGKHF 229

Query: 61  FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQR 100
           FLETD+KGP LKLD TGKAILTVLRHLGR  ETRIGH R
Sbjct: 230 FLETDIKGPGLKLDTTGKAILTVLRHLGRFQETRIGHHR 268

[Close]

BLAST of Csa7G342800 vs. TrEMBL
Match: A0A0A0K8D0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G342800 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 1.7e-74
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1


Query: 1   MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 60
           MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF
Sbjct: 1   MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 60

Query: 61  FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRPVEENPLYNSSNPFLKDLSAD 120
           FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRPVEENPLYNSSNPFLKDLSAD
Sbjct: 61  FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRPVEENPLYNSSNPFLKDLSAD 120

Query: 121 EYNRLFWRRLDNLRMLSYMACL 143
           EYNRLFWRRLDNLRMLSYMACL
Sbjct: 121 EYNRLFWRRLDNLRMLSYMACL 142

[Close]

BLAST of Csa7G342800 vs. TrEMBL
Match: A0A061E205_THECC (Spindle and kinetochore-associated protein 1 isoform 1 OS=Theobroma cacao GN=TCM_005566 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-41
Identity = 87/101 (86.14%), Postives = 95/101 (94.06%), Query Frame = 1


Query: 1   MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 60
           MRGRLT++KVNAA+ DMATYAEANAQL+  PKKKLAENLWE+ALELRDIATT AVKGK+F
Sbjct: 167 MRGRLTLEKVNAAINDMATYAEANAQLVAAPKKKLAENLWERALELRDIATTEAVKGKHF 226

Query: 61  FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRPV 102
           FLE+DMKGPSLKLDNTGKAILTVLRHLGRISETRIGH R +
Sbjct: 227 FLESDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHNRVI 267

[Close]

BLAST of Csa7G342800 vs. TrEMBL
Match: A0A0B0MIF6_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_17641 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-40
Identity = 84/101 (83.17%), Postives = 94/101 (93.07%), Query Frame = 1


Query: 1   MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 60
           MRGRLT++KVNAA+ DMATYAEANAQLI  PKKKLAEN WE+ALEL+DIATT ++KGK+F
Sbjct: 161 MRGRLTLEKVNAAINDMATYAEANAQLIAAPKKKLAENQWERALELKDIATTESIKGKHF 220

Query: 61  FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRPV 102
           FLETDMKGPSLKLDNTGKAILTVLRHLGRISETR+GH R +
Sbjct: 221 FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRMGHHRVI 261

[Close]

BLAST of Csa7G342800 vs. TrEMBL
Match: A0A0D2T3Z1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G105800 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-40
Identity = 84/101 (83.17%), Postives = 94/101 (93.07%), Query Frame = 1


Query: 1   MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 60
           MRGRLT++KVNAA+ DMATYAEANAQLI  PKKKLAEN WE++LELRDIATT ++KGK+F
Sbjct: 161 MRGRLTLEKVNAAINDMATYAEANAQLIAAPKKKLAENQWERSLELRDIATTESIKGKHF 220

Query: 61  FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRPV 102
           FLETDMKGPSLKLDNTGKAILTVLRHLGRISETR+GH R +
Sbjct: 221 FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRMGHHRVI 261

[Close]

BLAST of Csa7G342800 vs. TrEMBL
Match: U5FQ07_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05890g PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.7e-40
Identity = 84/101 (83.17%), Postives = 93/101 (92.08%), Query Frame = 1


Query: 1   MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 60
           MRGRLT+DKVNAA+ DMA YA++N+QLI  PKKKLAENLWEKALELRDIA T ++KGK+F
Sbjct: 99  MRGRLTLDKVNAAINDMAAYADSNSQLITAPKKKLAENLWEKALELRDIAMTESIKGKHF 158

Query: 61  FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRPV 102
           FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGH R +
Sbjct: 159 FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHHRVI 199

[Close]

BLAST of Csa7G342800 vs. TAIR10
Match: AT3G60660.1 (AT3G60660.1 unknown protein)

HSP 1 Score: 164.1 bits (414), Expect = 6.4e-41
Identity = 82/101 (81.19%), Postives = 88/101 (87.13%), Query Frame = 1


Query: 1   MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 60
           MRGRLT++KVNAA+ DMA+YAEANA LI   K+KLAENLWEKAL+LRDI T  AVKGK+F
Sbjct: 166 MRGRLTLEKVNAAINDMASYAEANAHLIAASKQKLAENLWEKALKLRDIVTEQAVKGKHF 225

Query: 61  FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRPV 102
           FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIG  R +
Sbjct: 226 FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGQNRVI 266

[Close]

BLAST of Csa7G342800 vs. NCBI nr
Match: gi|700189379|gb|KGN44612.1| (hypothetical protein Csa_7G342800 [Cucumis sativus])

HSP 1 Score: 286.6 bits (732), Expect = 2.4e-74
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1


Query: 1   MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 60
           MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF
Sbjct: 1   MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 60

Query: 61  FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRPVEENPLYNSSNPFLKDLSAD 120
           FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRPVEENPLYNSSNPFLKDLSAD
Sbjct: 61  FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRPVEENPLYNSSNPFLKDLSAD 120

Query: 121 EYNRLFWRRLDNLRMLSYMACL 143
           EYNRLFWRRLDNLRMLSYMACL
Sbjct: 121 EYNRLFWRRLDNLRMLSYMACL 142

[Close]

BLAST of Csa7G342800 vs. NCBI nr
Match: gi|449443722|ref|XP_004139626.1| (PREDICTED: spindle and kinetochore-associated protein 1 homolog [Cucumis sativus])

HSP 1 Score: 197.6 bits (501), Expect = 1.5e-47
Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 1


Query: 1   MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 60
           MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF
Sbjct: 163 MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 222

Query: 61  FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRPV 102
           FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQR +
Sbjct: 223 FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVI 263

[Close]

BLAST of Csa7G342800 vs. NCBI nr
Match: gi|659116314|ref|XP_008458015.1| (PREDICTED: spindle and kinetochore-associated protein 1 homolog [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-44
Identity = 94/101 (93.07%), Postives = 98/101 (97.03%), Query Frame = 1


Query: 1   MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 60
           MRGRLTVDKVNAAV DMATYAEANAQLIGIPKKKLAENLWEKALELRDIA T+AVKGKYF
Sbjct: 163 MRGRLTVDKVNAAVNDMATYAEANAQLIGIPKKKLAENLWEKALELRDIAATDAVKGKYF 222

Query: 61  FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRPV 102
           FLETDM+GPSLKLDNTGKAILTVLRH+GRISETRIGHQR +
Sbjct: 223 FLETDMRGPSLKLDNTGKAILTVLRHVGRISETRIGHQRVI 263

[Close]

BLAST of Csa7G342800 vs. NCBI nr
Match: gi|590723239|ref|XP_007052131.1| (Spindle and kinetochore-associated protein 1 isoform 1 [Theobroma cacao])

HSP 1 Score: 177.6 bits (449), Expect = 1.6e-41
Identity = 87/101 (86.14%), Postives = 95/101 (94.06%), Query Frame = 1


Query: 1   MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 60
           MRGRLT++KVNAA+ DMATYAEANAQL+  PKKKLAENLWE+ALELRDIATT AVKGK+F
Sbjct: 167 MRGRLTLEKVNAAINDMATYAEANAQLVAAPKKKLAENLWERALELRDIATTEAVKGKHF 226

Query: 61  FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRPV 102
           FLE+DMKGPSLKLDNTGKAILTVLRHLGRISETRIGH R +
Sbjct: 227 FLESDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHNRVI 267

[Close]

BLAST of Csa7G342800 vs. NCBI nr
Match: gi|823207986|ref|XP_012437499.1| (PREDICTED: spindle and kinetochore-associated protein 1 homolog [Gossypium raimondii])

HSP 1 Score: 173.3 bits (438), Expect = 3.0e-40
Identity = 84/101 (83.17%), Postives = 94/101 (93.07%), Query Frame = 1


Query: 1   MRGRLTVDKVNAAVYDMATYAEANAQLIGIPKKKLAENLWEKALELRDIATTNAVKGKYF 60
           MRGRLT++KVNAA+ DMATYAEANAQLI  PKKKLAEN WE++LELRDIATT ++KGK+F
Sbjct: 161 MRGRLTLEKVNAAINDMATYAEANAQLIAAPKKKLAENQWERSLELRDIATTESIKGKHF 220

Query: 61  FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRIGHQRPV 102
           FLETDMKGPSLKLDNTGKAILTVLRHLGRISETR+GH R +
Sbjct: 221 FLETDMKGPSLKLDNTGKAILTVLRHLGRISETRMGHHRVI 261

The following BLAST results are available for this feature:

BLAST of Csa7G342800 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SKA1_ARATH	1.1e-39	81.19	Spindle and kinetochore-associated protein 1 homolog OS=Arabidopsis thaliana GN=...	[more]
SKA1_MAIZE	5.0e-35	71.72	Spindle and kinetochore-associated protein 1 homolog OS=Zea mays PE=2 SV=1	[more]
SKA1_ORYSJ	5.0e-35	70.71	Spindle and kinetochore-associated protein 1 homolog OS=Oryza sativa subsp. japo...	[more]
SKA1_ORYSI	1.4e-34	70.71	Spindle and kinetochore-associated protein 1 homolog OS=Oryza sativa subsp. indi...	[more]

BLAST of Csa7G342800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8D0_CUCSA	1.7e-74	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G342800 PE=4 SV=1	[more]
A0A061E205_THECC	1.1e-41	86.14	Spindle and kinetochore-associated protein 1 isoform 1 OS=Theobroma cacao GN=TCM...	[more]
A0A0B0MIF6_GOSAR	2.1e-40	83.17	Uncharacterized protein OS=Gossypium arboreum GN=F383_17641 PE=4 SV=1	[more]
A0A0D2T3Z1_GOSRA	2.1e-40	83.17	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G105800 PE=4 SV=1	[more]
U5FQ07_POPTR	4.7e-40	83.17	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05890g PE=4 SV=1	[more]

BLAST of Csa7G342800 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60660.1	6.4e-41	81.19	unknown protein	[more]

BLAST of Csa7G342800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700189379\|gb\|KGN44612.1\|	2.4e-74	100.00	hypothetical protein Csa_7G342800 [Cucumis sativus]	[more]
gi\|449443722\|ref\|XP_004139626.1\|	1.5e-47	98.02	PREDICTED: spindle and kinetochore-associated protein 1 homolog [Cucumis sativus...	[more]
gi\|659116314\|ref\|XP_008458015.1\|	1.2e-44	93.07	PREDICTED: spindle and kinetochore-associated protein 1 homolog [Cucumis melo]	[more]
gi\|590723239\|ref\|XP_007052131.1\|	1.6e-41	86.14	Spindle and kinetochore-associated protein 1 isoform 1 [Theobroma cacao]	[more]
gi\|823207986\|ref\|XP_012437499.1\|	3.0e-40	83.17	PREDICTED: spindle and kinetochore-associated protein 1 homolog [Gossypium raimo...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009829	SKA1

Vocabulary: **Biological Process**
Term	Definition
GO:0007059	chromosome segregation
GO:0051301	cell division

Vocabulary: **Molecular Function**
Term	Definition
GO:0008017	microtubule binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0007059	chromosome segregation
biological_process	GO:0006261	DNA-dependent DNA replication
cellular_component	GO:0045298	tubulin complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008017	microtubule binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU111461	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa7G342800.1	Csa7G342800.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU111461	CU111461	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009829	Spindle and kinetochore-associated protein 1	PFAM	PF07160	DUF1395	coord: 1..97 score: 2.2
None	No IPR available	PANTHER	PTHR28573	FAMILY NOT NAMED	coord: 1..99 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa7G342800	CSPI07G14410	Wild cucumber (PI 183967)	cpicuB354
Csa7G342800	Cp4.1LG17g11000	Cucurbita pepo (Zucchini)	cpecuB337
Csa7G342800	CsGy7G012980	Cucumber (Gy14) v2	cgybcuB323

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa7G342800	Cucumber (Chinese Long) v2	cucuB132
Csa7G342800	Cucumber (Gy14) v1	cgycuB076
Csa7G342800	Cucurbita maxima (Rimu)	cmacuB384
Csa7G342800	Cucurbita maxima (Rimu)	cmacuB531
Csa7G342800	Cucurbita maxima (Rimu)	cmacuB647
Csa7G342800	Cucurbita maxima (Rimu)	cmacuB914
Csa7G342800	Cucurbita moschata (Rifu)	cmocuB374
Csa7G342800	Cucurbita moschata (Rifu)	cmocuB522
Csa7G342800	Cucurbita moschata (Rifu)	cmocuB900
Csa7G342800	Melon (DHL92) v3.5.1	cumeB523
Csa7G342800	Watermelon (Charleston Gray)	cuwcgB525
Csa7G342800	Watermelon (Charleston Gray)	cuwcgB565
Csa7G342800	Watermelon (97103) v1	cuwmB567
Csa7G342800	Watermelon (97103) v1	cuwmB587
Csa7G342800	Cucurbita pepo (Zucchini)	cpecuB157
Csa7G342800	Cucurbita pepo (Zucchini)	cpecuB769
Csa7G342800	Bottle gourd (USVL1VR-Ls)	culsiB503
Csa7G342800	Bottle gourd (USVL1VR-Ls)	culsiB526
Csa7G342800	Cucumber (Gy14) v2	cgybcuB152
Csa7G342800	Melon (DHL92) v3.6.1	cumedB502
Csa7G342800	Silver-seed gourd	carcuB0095
Csa7G342800	Watermelon (97103) v2	cuwmbB550
Csa7G342800	Watermelon (97103) v2	cuwmbB571
Csa7G342800	Wax gourd	cuwgoB705