Csa7G328270 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G328270
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 11497950 .. 11498463 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGGAGAAGAAGTTGATGAGGATTATATCTTGAAGTTCATGGATGAAGGCATCTGTAAGCCAATGGAGAAAGCGTTTGAAGATATGATCCAATGCCAACATGTCCTTCAAGAAACACAATTCGAACGCATAACCACGTAAGTGATCTAGAATTGAGAATGGAAAATGTGATTATGTCTATTGAGGCATATATAAGTCAACAAGATGAGAAAATAATGAAGCTCACAGCGCAAAATGGAGAGCTCCATATTGAACTTCTTAAAGTCTACGAGCAAAATTAGGCTTTAAACGCAAGGATGGAAAGACTGACTGATCTGGTTGATGTCTTAGCGGAAAGATGCGACACACAGTTCAACACCTTATTGAGATATCAACATATGTTAGTGTGTTCCGCAACGACTCAGGTTTTGTTAAGCTTAACAAGTCCTTTAACACGTTTTGATCTGGCAGTGAAAGCGAGGATGAATCCACCGCAACTATCATCAGAACCTCCTCTACGCCACAATCTTAA

mRNA sequence

ATGCATGGAGAAGAAGTTGATGAGGATTATATCTTGAAGTTCATGGATGAAGGCATCTGTAAGCCAATGGAGAAAGCGTTTGAAGATATGATCCAATGCCAACATGTCCTTCAAGAAACACAATTCGAACGCATAACCACTGAAAGCGAGGATGAATCCACCGCAACTATCATCAGAACCTCCTCTACGCCACAATCTTAA

Coding sequence (CDS)

ATGCATGGAGAAGAAGTTGATGAGGATTATATCTTGAAGTTCATGGATGAAGGCATCTGTAAGCCAATGGAGAAAGCGTTTGAAGATATGATCCAATGCCAACATGTCCTTCAAGAAACACAATTCGAACGCATAACCACTGAAAGCGAGGATGAATCCACCGCAACTATCATCAGAACCTCCTCTACGCCACAATCTTAA

Protein sequence

MHGEEVDEDYILKFMDEGICKPMEKAFEDMIQCQHVLQETQFERITTESEDESTATIIRTSSTPQS*
Homology
[Close]
BLAST of Csa7G328270 vs. TrEMBL
Match: A0A0A0K6M2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G328270 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.0e-29
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1 

Query: 1  MHGEEVDEDYILKFMDEGICKPMEKAFEDMIQCQHVLQETQFERITTESEDESTATIIRT 60
          MHGEEVDEDYILKFMDEGICKPMEKAFEDMIQCQHVLQETQFERITTESEDESTATIIRT
Sbjct: 1  MHGEEVDEDYILKFMDEGICKPMEKAFEDMIQCQHVLQETQFERITTESEDESTATIIRT 60

Query: 61 SSTPQS 67
          SSTPQS
Sbjct: 61 SSTPQS 66

[Close]
BLAST of Csa7G328270 vs. NCBI nr
Match: gi|700189306|gb|KGN44539.1| (hypothetical protein Csa_7G328270 [Cucumis sativus])

HSP 1 Score: 136.7 bits (343), Expect = 1.5e-29
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1 

Query: 1  MHGEEVDEDYILKFMDEGICKPMEKAFEDMIQCQHVLQETQFERITTESEDESTATIIRT 60
          MHGEEVDEDYILKFMDEGICKPMEKAFEDMIQCQHVLQETQFERITTESEDESTATIIRT
Sbjct: 1  MHGEEVDEDYILKFMDEGICKPMEKAFEDMIQCQHVLQETQFERITTESEDESTATIIRT 60

Query: 61 SSTPQS 67
          SSTPQS
Sbjct: 61 SSTPQS 66

The following BLAST results are available for this feature:
BLAST of Csa7G328270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6M2_CUCSA1.0e-29100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G328270 PE=4 SV=1[more]
BLAST of Csa7G328270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189306|gb|KGN44539.1|1.5e-29100.00hypothetical protein Csa_7G328270 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G328270.1Csa7G328270.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G328270CSPI07G13490Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G328270Watermelon (97103) v2cuwmbB571
Csa7G328270Wax gourdcuwgoB706
Csa7G328270Cucumber (Gy14) v1cgycuB076
Csa7G328270Cucurbita maxima (Rimu)cmacuB389
Csa7G328270Cucurbita maxima (Rimu)cmacuB925
Csa7G328270Cucurbita moschata (Rifu)cmocuB379
Csa7G328270Cucurbita moschata (Rifu)cmocuB909
Csa7G328270Watermelon (Charleston Gray)cuwcgB525
Csa7G328270Watermelon (97103) v1cuwmB567
Csa7G328270Cucurbita pepo (Zucchini)cpecuB162
Csa7G328270Cucurbita pepo (Zucchini)cpecuB346
Csa7G328270Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G328270Cucumber (Gy14) v2cgybcuB323
Csa7G328270Melon (DHL92) v3.6.1cumedB515
Csa7G328270Silver-seed gourdcarcuB0097