Csa7G327740 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G327740
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 11461878 .. 11462450 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGTGGAGAAGGTTAAGAAGGAGATGTTGAGGCAACAAGTTGCCAAGAGGCGAGAAGAGAAAGTGAAGAAGGTTGATTCTCATTGTGAAGTGATTCTGAGAGAAGAAGAGGAGGACCATGATGATGAGGAAAAAAACACCCATTACTTTTGCCAATATCCACAAATACTTCAAAGTGGAAAAATGGATTTACCATTTCAAAGGAGGTCTTCCGAGCTTTTTGAGTTCCCTTATCCATACGTTGAAGTGAGAGAAACTCTTTGTGGTGTGTTCGACATGAGGGTAGACGTAGTGAACCTCTTTTATAAAAGCTTCATTCATGATGAAGAGAACTACACAGTGGTTAAGCAGGAACACGTGTACTTTGGGCTAGACGACATTAATGCGTTCTATGGGTTGGATACCAATGAAGTCGGTCAAGTCATCTTCAAAAATTCAACTCCAAAAGACATGGATGACGGGTTAAAGACTATCACTTGGTTAAAAACCGAGTGGGACAACAAACCAACTGAGAAATATCAACTCTTTTCGCATAATCTCAACACGTGTGCTAGCATCTGGCTCTTTTAG

mRNA sequence

ATGAGGGTGGAGAAGGTTAAGAAGGAGATGTTGAGGCAACAAGTTGCCAAGAGGCGAGAAGAGAAAGTGAAGAAGGTTGATTCTCATTGTGAAGTGATTCTGAGAGAAGAAGAGGAGGACCATGATGATGAGGAAAAAAACACCCATTACTTTTGCCAATATCCACAAATACTTCAAAGTGGAAAAATGGATTTACCATTTCAAAGGAGGTCTTCCGAGCTTTTTGAGTTCCCTTATCCATACGTTGAAGTGAGAGAAACTCTTTGTGGTGTGTTCGACATGAGGGTAGACGTAGTGAACCTCTTTTATAAAAGCTTCATTCATGATGAAGAGAACTACACAGTGGTTAAGCAGGAACACGTGTACTTTGGGCTAGACGACATTAATGCGTTCTATGGGTTGGATACCAATGAAGTCGGTCAAGTCATCTTCAAAAATTCAACTCCAAAAGACATGGATGACGGGTTAAAGACTATCACTTGGTTAAAAACCGAGTGGGACAACAAACCAACTGAGAAATATCAACTCTTTTCGCATAATCTCAACACGTGTGCTAGCATCTGGCTCTTTTAG

Coding sequence (CDS)

ATGAGGGTGGAGAAGGTTAAGAAGGAGATGTTGAGGCAACAAGTTGCCAAGAGGCGAGAAGAGAAAGTGAAGAAGGTTGATTCTCATTGTGAAGTGATTCTGAGAGAAGAAGAGGAGGACCATGATGATGAGGAAAAAAACACCCATTACTTTTGCCAATATCCACAAATACTTCAAAGTGGAAAAATGGATTTACCATTTCAAAGGAGGTCTTCCGAGCTTTTTGAGTTCCCTTATCCATACGTTGAAGTGAGAGAAACTCTTTGTGGTGTGTTCGACATGAGGGTAGACGTAGTGAACCTCTTTTATAAAAGCTTCATTCATGATGAAGAGAACTACACAGTGGTTAAGCAGGAACACGTGTACTTTGGGCTAGACGACATTAATGCGTTCTATGGGTTGGATACCAATGAAGTCGGTCAAGTCATCTTCAAAAATTCAACTCCAAAAGACATGGATGACGGGTTAAAGACTATCACTTGGTTAAAAACCGAGTGGGACAACAAACCAACTGAGAAATATCAACTCTTTTCGCATAATCTCAACACGTGTGCTAGCATCTGGCTCTTTTAG

Protein sequence

MRVEKVKKEMLRQQVAKRREEKVKKVDSHCEVILREEEEDHDDEEKNTHYFCQYPQILQSGKMDLPFQRRSSELFEFPYPYVEVRETLCGVFDMRVDVVNLFYKSFIHDEENYTVVKQEHVYFGLDDINAFYGLDTNEVGQVIFKNSTPKDMDDGLKTITWLKTEWDNKPTEKYQLFSHNLNTCASIWLF*
Homology
[Close]
BLAST of Csa7G327740 vs. TrEMBL
Match: A0A0A0K4F2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G327740 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 2.4e-108
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1 

Query: 1   MRVEKVKKEMLRQQVAKRREEKVKKVDSHCEVILREEEEDHDDEEKNTHYFCQYPQILQS 60
           MRVEKVKKEMLRQQVAKRREEKVKKVDSHCEVILREEEEDHDDEEKNTHYFCQYPQILQS
Sbjct: 1   MRVEKVKKEMLRQQVAKRREEKVKKVDSHCEVILREEEEDHDDEEKNTHYFCQYPQILQS 60

Query: 61  GKMDLPFQRRSSELFEFPYPYVEVRETLCGVFDMRVDVVNLFYKSFIHDEENYTVVKQEH 120
           GKMDLPFQRRSSELFEFPYPYVEVRETLCGVFDMRVDVVNLFYKSFIHDEENYTVVKQEH
Sbjct: 61  GKMDLPFQRRSSELFEFPYPYVEVRETLCGVFDMRVDVVNLFYKSFIHDEENYTVVKQEH 120

Query: 121 VYFGLDDINAFYGLDTNEVGQVIFKNSTPKDMDDGLKTITWLKTEWDNKPTEKYQLFSHN 180
           VYFGLDDINAFYGLDTNEVGQVIFKNSTPKDMDDGLKTITWLKTEWDNKPTEKYQLFSHN
Sbjct: 121 VYFGLDDINAFYGLDTNEVGQVIFKNSTPKDMDDGLKTITWLKTEWDNKPTEKYQLFSHN 180

Query: 181 LNTCASIWLF 191
           LNTCASIWLF
Sbjct: 181 LNTCASIWLF 190

[Close]
BLAST of Csa7G327740 vs. NCBI nr
Match: gi|700189302|gb|KGN44535.1| (hypothetical protein Csa_7G327740 [Cucumis sativus])

HSP 1 Score: 399.4 bits (1025), Expect = 3.4e-108
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1 

Query: 1   MRVEKVKKEMLRQQVAKRREEKVKKVDSHCEVILREEEEDHDDEEKNTHYFCQYPQILQS 60
           MRVEKVKKEMLRQQVAKRREEKVKKVDSHCEVILREEEEDHDDEEKNTHYFCQYPQILQS
Sbjct: 1   MRVEKVKKEMLRQQVAKRREEKVKKVDSHCEVILREEEEDHDDEEKNTHYFCQYPQILQS 60

Query: 61  GKMDLPFQRRSSELFEFPYPYVEVRETLCGVFDMRVDVVNLFYKSFIHDEENYTVVKQEH 120
           GKMDLPFQRRSSELFEFPYPYVEVRETLCGVFDMRVDVVNLFYKSFIHDEENYTVVKQEH
Sbjct: 61  GKMDLPFQRRSSELFEFPYPYVEVRETLCGVFDMRVDVVNLFYKSFIHDEENYTVVKQEH 120

Query: 121 VYFGLDDINAFYGLDTNEVGQVIFKNSTPKDMDDGLKTITWLKTEWDNKPTEKYQLFSHN 180
           VYFGLDDINAFYGLDTNEVGQVIFKNSTPKDMDDGLKTITWLKTEWDNKPTEKYQLFSHN
Sbjct: 121 VYFGLDDINAFYGLDTNEVGQVIFKNSTPKDMDDGLKTITWLKTEWDNKPTEKYQLFSHN 180

Query: 181 LNTCASIWLF 191
           LNTCASIWLF
Sbjct: 181 LNTCASIWLF 190

The following BLAST results are available for this feature:
BLAST of Csa7G327740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4F2_CUCSA2.4e-108100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G327740 PE=4 SV=1[more]
BLAST of Csa7G327740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189302|gb|KGN44535.1|3.4e-108100.00hypothetical protein Csa_7G327740 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G327740.1Csa7G327740.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G327740CSPI07G13450Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G327740Melon (DHL92) v3.6.1cumedB515
Csa7G327740Silver-seed gourdcarcuB0097
Csa7G327740Watermelon (97103) v2cuwmbB571
Csa7G327740Wax gourdcuwgoB706
Csa7G327740Cucumber (Gy14) v1cgycuB076
Csa7G327740Cucurbita maxima (Rimu)cmacuB389
Csa7G327740Cucurbita maxima (Rimu)cmacuB925
Csa7G327740Cucurbita moschata (Rifu)cmocuB379
Csa7G327740Cucurbita moschata (Rifu)cmocuB909
Csa7G327740Melon (DHL92) v3.5.1cumeB526
Csa7G327740Watermelon (Charleston Gray)cuwcgB525
Csa7G327740Watermelon (97103) v1cuwmB567
Csa7G327740Cucurbita pepo (Zucchini)cpecuB162
Csa7G327740Cucurbita pepo (Zucchini)cpecuB346
Csa7G327740Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G327740Cucumber (Gy14) v2cgybcuB323