Csa7G325730 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G325730
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 11438726 .. 11439298 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCATAATTTGTGTTTGGATAAAGAATCCAAAATTGAGAAGAAGGAATTATGTAGTAAAGGCTAAATGAGGGAATTTGAAAACATTAAACAAATCCCATCGTCTCCAAACAAAACTCGCATTACGTTGTTTGTTTTCTTGAAGGAGGGGAAAAGGAAAATAAAACCTTCATTTTTAAAAGACGTTTTGGTGCCTCCATTTTCCTTTTTAATTCTTCTCTTTTTTGTGAACTCTCAGATCCCTCTCTTCTCTTCTATTTTTCTTCTTCCGACGAGCACTCCGGCGTTCCTCAACCTCCCACCAACGTCTGGGGCCTTCACCGTGCTATTCAAGCTATAACAGCATTCAGCGACGCTAAACATCTAACTCCGGCGGTGCCGGCGGAAGCTTCACAGCAAGGGTAATTTCCCTTTTCTTTCAACTGGTCACTGCTTTTTTTATTTGGGGTTCAAGCCGCAATGTTTTTTTTTACTTCGATTCAGACTGCAAACCACCCATCAATCTCATAATTCAACCCTCGTTGTTTCAGTATTTGAGTCCAATACCGAATGTTGTGTTTATGAGTTGTAA

mRNA sequence

ATGGTCCATAATTTGTGTTTGGATAAAGAATCCAAAATTGAGAAGAAGGAATTATGTAATCCCTCTCTTCTCTTCTATTTTTCTTCTTCCGACGAGCACTCCGGCGTTCCTCAACCTCCCACCAACGTCTGGGGCCTTCACCGTGCTATTCAAGCTATAACAGCATTCAGCGACGCTAAACATCTAACTCCGGCGGTGCCGGCGGAAGCTTCACAGCAAGGACTGCAAACCACCCATCAATCTCATAATTCAACCCTCGTTGTTTCAGTATTTGAGTCCAATACCGAATGTTGTGTTTATGAGTTGTAA

Coding sequence (CDS)

ATGGTCCATAATTTGTGTTTGGATAAAGAATCCAAAATTGAGAAGAAGGAATTATGTAATCCCTCTCTTCTCTTCTATTTTTCTTCTTCCGACGAGCACTCCGGCGTTCCTCAACCTCCCACCAACGTCTGGGGCCTTCACCGTGCTATTCAAGCTATAACAGCATTCAGCGACGCTAAACATCTAACTCCGGCGGTGCCGGCGGAAGCTTCACAGCAAGGACTGCAAACCACCCATCAATCTCATAATTCAACCCTCGTTGTTTCAGTATTTGAGTCCAATACCGAATGTTGTGTTTATGAGTTGTAA

Protein sequence

MVHNLCLDKESKIEKKELCNPSLLFYFSSSDEHSGVPQPPTNVWGLHRAIQAITAFSDAKHLTPAVPAEASQQGLQTTHQSHNSTLVVSVFESNTECCVYEL*
Homology
[Close]
BLAST of Csa7G325730 vs. TrEMBL
Match: A0A0A0K877_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G325730 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.7e-52
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   MVHNLCLDKESKIEKKELCNPSLLFYFSSSDEHSGVPQPPTNVWGLHRAIQAITAFSDAK 60
           MVHNLCLDKESKIEKKELCNPSLLFYFSSSDEHSGVPQPPTNVWGLHRAIQAITAFSDAK
Sbjct: 1   MVHNLCLDKESKIEKKELCNPSLLFYFSSSDEHSGVPQPPTNVWGLHRAIQAITAFSDAK 60

Query: 61  HLTPAVPAEASQQGLQTTHQSHNSTLVVSVFESNTECCVYEL 103
           HLTPAVPAEASQQGLQTTHQSHNSTLVVSVFESNTECCVYEL
Sbjct: 61  HLTPAVPAEASQQGLQTTHQSHNSTLVVSVFESNTECCVYEL 102

[Close]
BLAST of Csa7G325730 vs. NCBI nr
Match: gi|700189299|gb|KGN44532.1| (hypothetical protein Csa_7G325730 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 2.5e-52
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   MVHNLCLDKESKIEKKELCNPSLLFYFSSSDEHSGVPQPPTNVWGLHRAIQAITAFSDAK 60
           MVHNLCLDKESKIEKKELCNPSLLFYFSSSDEHSGVPQPPTNVWGLHRAIQAITAFSDAK
Sbjct: 1   MVHNLCLDKESKIEKKELCNPSLLFYFSSSDEHSGVPQPPTNVWGLHRAIQAITAFSDAK 60

Query: 61  HLTPAVPAEASQQGLQTTHQSHNSTLVVSVFESNTECCVYEL 103
           HLTPAVPAEASQQGLQTTHQSHNSTLVVSVFESNTECCVYEL
Sbjct: 61  HLTPAVPAEASQQGLQTTHQSHNSTLVVSVFESNTECCVYEL 102

The following BLAST results are available for this feature:
BLAST of Csa7G325730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K877_CUCSA1.7e-52100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G325730 PE=4 SV=1[more]
BLAST of Csa7G325730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189299|gb|KGN44532.1|2.5e-52100.00hypothetical protein Csa_7G325730 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU088794cucumber EST collection version 3.0transcribed_cluster
CU148788cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G325730.1Csa7G325730.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU088794CU088794transcribed_cluster
CU148788CU148788transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G325730Lsi02G020270Bottle gourd (USVL1VR-Ls)culsiB503
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G325730Cucumber (Gy14) v2cgybcuB323
Csa7G325730Melon (DHL92) v3.6.1cumedB515
Csa7G325730Silver-seed gourdcarcuB0097
Csa7G325730Watermelon (97103) v2cuwmbB571
Csa7G325730Wax gourdcuwgoB706
Csa7G325730Cucumber (Gy14) v1cgycuB076
Csa7G325730Cucurbita maxima (Rimu)cmacuB389
Csa7G325730Cucurbita maxima (Rimu)cmacuB925
Csa7G325730Cucurbita moschata (Rifu)cmocuB379
Csa7G325730Cucurbita moschata (Rifu)cmocuB909
Csa7G325730Melon (DHL92) v3.5.1cumeB526
Csa7G325730Watermelon (Charleston Gray)cuwcgB525
Csa7G325730Watermelon (97103) v1cuwmB567
Csa7G325730Cucurbita pepo (Zucchini)cpecuB162
Csa7G325730Cucurbita pepo (Zucchini)cpecuB346