Csa7G305380 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G305380
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 10603587 .. 10603928 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCCTTAATGCAGAAAAATTTGTGCCAATATCTCAATTGACATCAGCAGGCAAATTTGTCGTGTTTGGACCAAATGGTGTTAAGGTTTACCAAGATTTGGAAGCCAGTGGCAAGCTATTGATGGAAAGACAAGAAATGGATTCCATCTATATCATGTTAGCAGAAGACGCCTACATGGATATGCAAAGGCATTTAGTGACAGAGTGCATTGATTCCACTGATGAACAATGTCATACGATTAATGAAGCATTATCATGGAAAGCACTTGATTCAGAAAAGACACCTAAGGATGAGAGGTCTTTTGAGGAAGGATCCAAAGATGAGATAAGTCGAGTATAA

mRNA sequence

ATGTGCCTTAATGCAGAAAAATTTGTGCCAATATCTCAATTGACATCAGCAGGCAAATTTGTCGTGTTTGGACCAAATGGTGTTAAGGTTTACCAAGATTTGGAAGCCAGTGGCAAGCTATTGATGGAAAGACAAGAAATGGATTCCATCTATATCATGTTAGCAGAAGACGCCTACATGGATATGCAAAGGCATTTAGTGACAGAGTGCATTGATTCCACTGATGAACAATGTCATACGATTAATGAAGCATTATCATGGAAAGCACTTGATTCAGAAAAGACACCTAAGGATGAGAGGTCTTTTGAGGAAGGATCCAAAGATGAGATAAGTCGAGTATAA

Coding sequence (CDS)

ATGTGCCTTAATGCAGAAAAATTTGTGCCAATATCTCAATTGACATCAGCAGGCAAATTTGTCGTGTTTGGACCAAATGGTGTTAAGGTTTACCAAGATTTGGAAGCCAGTGGCAAGCTATTGATGGAAAGACAAGAAATGGATTCCATCTATATCATGTTAGCAGAAGACGCCTACATGGATATGCAAAGGCATTTAGTGACAGAGTGCATTGATTCCACTGATGAACAATGTCATACGATTAATGAAGCATTATCATGGAAAGCACTTGATTCAGAAAAGACACCTAAGGATGAGAGGTCTTTTGAGGAAGGATCCAAAGATGAGATAAGTCGAGTATAA

Protein sequence

MCLNAEKFVPISQLTSAGKFVVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDMQRHLVTECIDSTDEQCHTINEALSWKALDSEKTPKDERSFEEGSKDEISRV*
Homology
[Close]
BLAST of Csa7G305380 vs. TrEMBL
Match: A0A0A0K4U2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G305380 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.6e-57
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1 

Query: 1   MCLNAEKFVPISQLTSAGKFVVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYM 60
           MCLNAEKFVPISQLTSAGKFVVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYM
Sbjct: 1   MCLNAEKFVPISQLTSAGKFVVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYM 60

Query: 61  DMQRHLVTECIDSTDEQCHTINEALSWKALDSEKTPKDERSFEEGSKDEISRV 114
           DMQRHLVTECIDSTDEQCHTINEALSWKALDSEKTPKDERSFEEGSKDEISRV
Sbjct: 61  DMQRHLVTECIDSTDEQCHTINEALSWKALDSEKTPKDERSFEEGSKDEISRV 113

[Close]
BLAST of Csa7G305380 vs. TrEMBL
Match: A5C7V8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041886 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.7e-06
Identity = 25/59 (42.37%), Postives = 43/59 (72.88%), Query Frame = 1 

Query: 6   EKFVPISQLTSAGKFVVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDMQR 65
           +  + ++QLTS+G FV+FGP  +KVY+DLE   + +++ + ++S+Y+M AE AY+D  R
Sbjct: 264 KNLLSVAQLTSSGHFVLFGPQDMKVYRDLEIMEESVIKGRRLESVYVMFAETAYVDKTR 322

[Close]
BLAST of Csa7G305380 vs. TrEMBL
Match: A0A0V0IRJ7_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.5e-06
Identity = 24/54 (44.44%), Postives = 40/54 (74.07%), Query Frame = 1 

Query: 11 ISQLTSAGKFVVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDMQR 65
          +SQLT +G +V+FGPN +KVY++L+ +   +ME + ++SIY+M AE  Y++  R
Sbjct: 46 VSQLTDSGNYVLFGPNDIKVYRNLKVTSTPIMEERRLESIYVMSAETTYVEKTR 99

[Close]
BLAST of Csa7G305380 vs. TrEMBL
Match: A0A0V0ILB6_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.5e-06
Identity = 24/54 (44.44%), Postives = 40/54 (74.07%), Query Frame = 1 

Query: 11 ISQLTSAGKFVVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDMQR 65
          +SQLT +G +V+FGPN +KVY++L+ +   +ME + ++SIY+M AE  Y++  R
Sbjct: 46 VSQLTDSGNYVLFGPNDIKVYRNLKVTSTPIMEERRLESIYVMSAETTYVEKTR 99

[Close]
BLAST of Csa7G305380 vs. TrEMBL
Match: M1AT88_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400011408 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.0e-06
Identity = 24/54 (44.44%), Postives = 40/54 (74.07%), Query Frame = 1 

Query: 11 ISQLTSAGKFVVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDMQR 65
          +SQLT +G +V+FGPN +KVY++L+ +   +ME + ++SIY+M AE  Y++  R
Sbjct: 38 VSQLTDSGNYVLFGPNDIKVYRNLKVTSTPIMEGKRLESIYVMSAETTYVEKTR 91

[Close]
BLAST of Csa7G305380 vs. NCBI nr
Match: gi|700189245|gb|KGN44478.1| (hypothetical protein Csa_7G305380 [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 3.7e-57
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1 

Query: 1   MCLNAEKFVPISQLTSAGKFVVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYM 60
           MCLNAEKFVPISQLTSAGKFVVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYM
Sbjct: 1   MCLNAEKFVPISQLTSAGKFVVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYM 60

Query: 61  DMQRHLVTECIDSTDEQCHTINEALSWKALDSEKTPKDERSFEEGSKDEISRV 114
           DMQRHLVTECIDSTDEQCHTINEALSWKALDSEKTPKDERSFEEGSKDEISRV
Sbjct: 61  DMQRHLVTECIDSTDEQCHTINEALSWKALDSEKTPKDERSFEEGSKDEISRV 113

[Close]
BLAST of Csa7G305380 vs. NCBI nr
Match: gi|659130452|ref|XP_008465179.1| (PREDICTED: uncharacterized protein LOC103502843 [Cucumis melo])

HSP 1 Score: 66.6 bits (161), Expect = 3.2e-08
Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 1 

Query: 6   EKFVPISQLTSAGKFVVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDMQR 65
           +  V ISQLTS G FVVFGPN VKVY + + SG  L+E + MD IY+M AE AY++  R
Sbjct: 201 KNLVTISQLTSVGNFVVFGPNDVKVYHNFKVSGTPLIEGRRMDFIYVMSAETAYVNKTR 259

[Close]
BLAST of Csa7G305380 vs. NCBI nr
Match: gi|802572798|ref|XP_012068371.1| (PREDICTED: uncharacterized protein LOC105630984 [Jatropha curcas])

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-06
Identity = 25/54 (46.30%), Postives = 42/54 (77.78%), Query Frame = 1 

Query: 11  ISQLTSAGKFVVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDMQR 65
           +SQ+ SAG +VVFGP+ VK+Y++L+  G  +ME + ++SIY++ A++AY+D  R
Sbjct: 257 VSQIASAGNYVVFGPDNVKIYRNLKLIGDPVMEGRRVESIYVLSAQEAYVDRTR 310

[Close]
BLAST of Csa7G305380 vs. NCBI nr
Match: gi|147863426|emb|CAN79781.1| (hypothetical protein VITISV_041886 [Vitis vinifera])

HSP 1 Score: 59.7 bits (143), Expect = 3.9e-06
Identity = 25/59 (42.37%), Postives = 43/59 (72.88%), Query Frame = 1 

Query: 6   EKFVPISQLTSAGKFVVFGPNGVKVYQDLEASGKLLMERQEMDSIYIMLAEDAYMDMQR 65
           +  + ++QLTS+G FV+FGP  +KVY+DLE   + +++ + ++S+Y+M AE AY+D  R
Sbjct: 264 KNLLSVAQLTSSGHFVLFGPQDMKVYRDLEIMEESVIKGRRLESVYVMFAETAYVDKTR 322

The following BLAST results are available for this feature:
BLAST of Csa7G305380 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4U2_CUCSA2.6e-57100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G305380 PE=4 SV=1[more]
A5C7V8_VITVI2.7e-0642.37Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041886 PE=4 SV=1[more]
A0A0V0IRJ7_SOLCH3.5e-0644.44Putative ovule protein OS=Solanum chacoense PE=4 SV=1[more]
A0A0V0ILB6_SOLCH3.5e-0644.44Putative ovule protein OS=Solanum chacoense PE=4 SV=1[more]
M1AT88_SOLTU6.0e-0644.44Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400011408 PE=4 SV=1[more]
BLAST of Csa7G305380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189245|gb|KGN44478.1|3.7e-57100.00hypothetical protein Csa_7G305380 [Cucumis sativus][more]
gi|659130452|ref|XP_008465179.1|3.2e-0855.93PREDICTED: uncharacterized protein LOC103502843 [Cucumis melo][more]
gi|802572798|ref|XP_012068371.1|3.0e-0646.30PREDICTED: uncharacterized protein LOC105630984 [Jatropha curcas][more]
gi|147863426|emb|CAN79781.1|3.9e-0642.37hypothetical protein VITISV_041886 [Vitis vinifera][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G305380.1Csa7G305380.1mRNA