Csa7G304370 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G304370
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 10566006 .. 10566719 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAACTAATCTTCAGGATCCGTTTTTGATGGACTTTTGTAGTTTCCTTGCTGTGTCGTTCAGATCTGTGGATTTGGTTGGGATGTTTTTTTCTTGCATCTTGTAATTGTCTGAAATGAAGAATATGATGGTTGCTTTAAGTTTAATGTGTGTTTACATGAAGCAGATGACAAAGTTGAAGAATTACTGTGTTCCATTTTGTTATATTTCTCATCTAGTATTATTTGTAGAACCCTGGAATGTTTGCTATGTCCGTTTTGTTTCCATGTCGGTTATTTTTTGTATTTGCTTACGACATATTATAGTTTTCGATTATTTATTAGTTTTTATAGGATTGCAATCTTGATAAAATAGTGGTGTTTCTGCCCTCGTCTCAATACTCAAATTAGTAATTATTTTTATTGTATGAGTATGAGTTGATTAAATTCTCTTTATTTTAAAGGAACTGTTGGTTGAGCAAATTACCGAAAAGGGGGAACTAACTGTGAGCAGAGAAAATGTCTTTGGCCAATGGATTGAAGTCATGTGCAAAGCTGCTGAAGTCTTCAGAACCATTGTTGGAGAAATCAGGTTTTGTTACTTTATTAGCTGGCAATTTAGAATTACTTTACCTTATGTATTACACTTCTTTCCTATGGTCTTAACTTGCAACAATCCTTCTCAAGTTCATAATAGATTTCTAGGATTTTCTCCAACAATCTTAAATAAATAG

mRNA sequence

ATGAAAACTAATCTTCAGGATCCGTTTTTGATGGACTTTTGTAGTTTCCTTGCTGTGTCGTTCAGATCTGTGGATTTGGAACTGTTGGTTGAGCAAATTACCGAAAAGGGGGAACTAACTGTGAGCAGAGAAAATGTCTTTGGCCAATGGATTGAAGTCATGTGCAAAGCTGCTGAAGTCTTCAGAACCATTGTTGGAGAAATCAGGTTTTGTTACTTTATTAGCTGGCAATTTAGAATTACTTTACCTTATGTATTACACTTCTTTCCTATGGTCTTAACTTGCAACAATCCTTCTCAAGTTCATAATAGATTTCTAGGATTTTCTCCAACAATCTTAAATAAATAG

Coding sequence (CDS)

ATGAAAACTAATCTTCAGGATCCGTTTTTGATGGACTTTTGTAGTTTCCTTGCTGTGTCGTTCAGATCTGTGGATTTGGAACTGTTGGTTGAGCAAATTACCGAAAAGGGGGAACTAACTGTGAGCAGAGAAAATGTCTTTGGCCAATGGATTGAAGTCATGTGCAAAGCTGCTGAAGTCTTCAGAACCATTGTTGGAGAAATCAGGTTTTGTTACTTTATTAGCTGGCAATTTAGAATTACTTTACCTTATGTATTACACTTCTTTCCTATGGTCTTAACTTGCAACAATCCTTCTCAAGTTCATAATAGATTTCTAGGATTTTCTCCAACAATCTTAAATAAATAG

Protein sequence

MKTNLQDPFLMDFCSFLAVSFRSVDLELLVEQITEKGELTVSRENVFGQWIEVMCKAAEVFRTIVGEIRFCYFISWQFRITLPYVLHFFPMVLTCNNPSQVHNRFLGFSPTILNK*
Homology
[Close]
BLAST of Csa7G304370 vs. TrEMBL
Match: A0A0A0K461_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G304370 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 2.5e-60
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1 

Query: 1   MKTNLQDPFLMDFCSFLAVSFRSVDLELLVEQITEKGELTVSRENVFGQWIEVMCKAAEV 60
           MKTNLQDPFLMDFCSFLAVSFRSVDLELLVEQITEKGELTVSRENVFGQWIEVMCKAAEV
Sbjct: 1   MKTNLQDPFLMDFCSFLAVSFRSVDLELLVEQITEKGELTVSRENVFGQWIEVMCKAAEV 60

Query: 61  FRTIVGEIRFCYFISWQFRITLPYVLHFFPMVLTCNNPSQVHNRFLGFSPTILNK 116
           FRTIVGEIRFCYFISWQFRITLPYVLHFFPMVLTCNNPSQVHNRFLGFSPTILNK
Sbjct: 61  FRTIVGEIRFCYFISWQFRITLPYVLHFFPMVLTCNNPSQVHNRFLGFSPTILNK 115

[Close]
BLAST of Csa7G304370 vs. NCBI nr
Match: gi|700189242|gb|KGN44475.1| (hypothetical protein Csa_7G304370 [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 3.6e-60
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1 

Query: 1   MKTNLQDPFLMDFCSFLAVSFRSVDLELLVEQITEKGELTVSRENVFGQWIEVMCKAAEV 60
           MKTNLQDPFLMDFCSFLAVSFRSVDLELLVEQITEKGELTVSRENVFGQWIEVMCKAAEV
Sbjct: 1   MKTNLQDPFLMDFCSFLAVSFRSVDLELLVEQITEKGELTVSRENVFGQWIEVMCKAAEV 60

Query: 61  FRTIVGEIRFCYFISWQFRITLPYVLHFFPMVLTCNNPSQVHNRFLGFSPTILNK 116
           FRTIVGEIRFCYFISWQFRITLPYVLHFFPMVLTCNNPSQVHNRFLGFSPTILNK
Sbjct: 61  FRTIVGEIRFCYFISWQFRITLPYVLHFFPMVLTCNNPSQVHNRFLGFSPTILNK 115

The following BLAST results are available for this feature:
BLAST of Csa7G304370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K461_CUCSA2.5e-60100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G304370 PE=4 SV=1[more]
BLAST of Csa7G304370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189242|gb|KGN44475.1|3.6e-60100.00hypothetical protein Csa_7G304370 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU112248cucumber EST collection version 3.0transcribed_cluster
CU146814cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G304370.1Csa7G304370.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU112248CU112248transcribed_cluster
CU146814CU146814transcribed_cluster