Csa7G298800 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G298800
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 10446920 .. 10447548 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCATCTGATTAAGGTTAGCTTCCTTCACCCATTGTTCTTCCAACTTCTCATCATGGATGCCTCCTTTCCTCCCCTTCATTTTACATGTGTCTAGCCTCCTCCCACAATGAGCATTGTTCCTCTTGAACAAAATGAAATAACTGGGCCTGTACTCTCAGCCCAAACACTTCGATCTAATGAATGCTACTTCTTTTTACAACTACCGGCCCCACCCCTTGCCAAGTCACATGGATAAGAAATTCTTTTTTCATCTCCTCACGTATTTTCCCTTTTTTAAACGCCTTTTTTTCCTTCCATGGTCATCCGTCTCTCAGAAAATTTCAGCACCCCCATCTCCTCGTCCCCCTACTTTCTACTCCCGCCACAGTTCTGCTCAACCTTAGTTTCTCTGTCCGCCAACCTCTTTTCCATGGTGGGTCAGGTTCTAGATTTAAATTGAGACAACACTCGCTTAGAACCCCTTTTTCCTCTGGACCCCATCAGTTACCATCTTCCTCACAGCGCCAATTGATAATGGTTGGTTCGTTGACTATAAACTACAGCACATCGCGAGAAGCAGATGCCCAATCGGTGGTGGATGATACATTATTCAAGGGCATCGGCGTGCCTAGTGAAAATGGTTGA

mRNA sequence

ATGGCCCATCTGATTAAGCCTCCTCCCACAATGAGCATTGTTCCTCTTGAACAAAATGAAATAACTGGGCCTGTACTCTCAGCCCAAACACTTCGATCTAATGAATGCTACTTCTTTTTACAACTACCGGCCCCACCCCTTGCCAAAAAATTTCAGCACCCCCATCTCCTCGTCCCCCTACTTTCTACTCCCGCCACAGTTCTGCTCAACCTTAGTTTCTCTGTCCGCCAACCTCTTTTCCATGGTGGGTCAGGTTCTAGATTTAAATTGAGACAACACTCGCTTAGAACCCCTTTTTCCTCTGGACCCCATCAGTTACCATCTTCCTCACAGCGCCAATTGATAATGGTTGGTTCGTTGACTATAAACTACAGCACATCGCGAGAAGCAGATGCCCAATCGGTGGTGGATGATACATTATTCAAGGGCATCGGCGTGCCTAGTGAAAATGGTTGA

Coding sequence (CDS)

ATGGCCCATCTGATTAAGCCTCCTCCCACAATGAGCATTGTTCCTCTTGAACAAAATGAAATAACTGGGCCTGTACTCTCAGCCCAAACACTTCGATCTAATGAATGCTACTTCTTTTTACAACTACCGGCCCCACCCCTTGCCAAAAAATTTCAGCACCCCCATCTCCTCGTCCCCCTACTTTCTACTCCCGCCACAGTTCTGCTCAACCTTAGTTTCTCTGTCCGCCAACCTCTTTTCCATGGTGGGTCAGGTTCTAGATTTAAATTGAGACAACACTCGCTTAGAACCCCTTTTTCCTCTGGACCCCATCAGTTACCATCTTCCTCACAGCGCCAATTGATAATGGTTGGTTCGTTGACTATAAACTACAGCACATCGCGAGAAGCAGATGCCCAATCGGTGGTGGATGATACATTATTCAAGGGCATCGGCGTGCCTAGTGAAAATGGTTGA

Protein sequence

MAHLIKPPPTMSIVPLEQNEITGPVLSAQTLRSNECYFFLQLPAPPLAKKFQHPHLLVPLLSTPATVLLNLSFSVRQPLFHGGSGSRFKLRQHSLRTPFSSGPHQLPSSSQRQLIMVGSLTINYSTSREADAQSVVDDTLFKGIGVPSENG*
Homology
[Close]
BLAST of Csa7G298800 vs. TrEMBL
Match: A0A0A0K6C9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G298800 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.4e-79
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1 

Query: 1   MAHLIKPPPTMSIVPLEQNEITGPVLSAQTLRSNECYFFLQLPAPPLAKKFQHPHLLVPL 60
           MAHLIKPPPTMSIVPLEQNEITGPVLSAQTLRSNECYFFLQLPAPPLAKKFQHPHLLVPL
Sbjct: 1   MAHLIKPPPTMSIVPLEQNEITGPVLSAQTLRSNECYFFLQLPAPPLAKKFQHPHLLVPL 60

Query: 61  LSTPATVLLNLSFSVRQPLFHGGSGSRFKLRQHSLRTPFSSGPHQLPSSSQRQLIMVGSL 120
           LSTPATVLLNLSFSVRQPLFHGGSGSRFKLRQHSLRTPFSSGPHQLPSSSQRQLIMVGSL
Sbjct: 61  LSTPATVLLNLSFSVRQPLFHGGSGSRFKLRQHSLRTPFSSGPHQLPSSSQRQLIMVGSL 120

Query: 121 TINYSTSREADAQSVVDDTLFKGIGVPSENG 152
           TINYSTSREADAQSVVDDTLFKGIGVPSENG
Sbjct: 121 TINYSTSREADAQSVVDDTLFKGIGVPSENG 151

[Close]
BLAST of Csa7G298800 vs. NCBI nr
Match: gi|700189231|gb|KGN44464.1| (hypothetical protein Csa_7G298800 [Cucumis sativus])

HSP 1 Score: 303.5 bits (776), Expect = 2.0e-79
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1 

Query: 1   MAHLIKPPPTMSIVPLEQNEITGPVLSAQTLRSNECYFFLQLPAPPLAKKFQHPHLLVPL 60
           MAHLIKPPPTMSIVPLEQNEITGPVLSAQTLRSNECYFFLQLPAPPLAKKFQHPHLLVPL
Sbjct: 1   MAHLIKPPPTMSIVPLEQNEITGPVLSAQTLRSNECYFFLQLPAPPLAKKFQHPHLLVPL 60

Query: 61  LSTPATVLLNLSFSVRQPLFHGGSGSRFKLRQHSLRTPFSSGPHQLPSSSQRQLIMVGSL 120
           LSTPATVLLNLSFSVRQPLFHGGSGSRFKLRQHSLRTPFSSGPHQLPSSSQRQLIMVGSL
Sbjct: 61  LSTPATVLLNLSFSVRQPLFHGGSGSRFKLRQHSLRTPFSSGPHQLPSSSQRQLIMVGSL 120

Query: 121 TINYSTSREADAQSVVDDTLFKGIGVPSENG 152
           TINYSTSREADAQSVVDDTLFKGIGVPSENG
Sbjct: 121 TINYSTSREADAQSVVDDTLFKGIGVPSENG 151

The following BLAST results are available for this feature:
BLAST of Csa7G298800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6C9_CUCSA1.4e-79100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G298800 PE=4 SV=1[more]
BLAST of Csa7G298800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189231|gb|KGN44464.1|2.0e-79100.00hypothetical protein Csa_7G298800 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU095727cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G298800.1Csa7G298800.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU095727CU095727transcribed_cluster