Csa7G293730 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G293730
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	GIGANTEA; contains IPR021099 (Plant organelle RNA recognition domain), IPR026211 (GIGANTEA)
Location	Chr7 : 10373050 .. 10381573 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTTATTGAGAAGTACTCTTCGATCTTCTATGTTGGTTCTGGAAGTAGTAGAGTGCCCCCTTATGTTAGGCTCTCCAATAAAGCTGAAATGATTGCTAGTGAAGAAGATAAGGTAAAGAGTGCAATGGAACCAATCTTAGTAAAGAATTTGAGGAAGCTGTTGATGCTGTCTGTTGATTGTCGAGTACCGCTCGAGAATATAGAATTCATTGCATCTGAATTGGGTTTGCCTTGTGACTTCAAAACTTCATTGATTCCTAAGTACCCTGAATTCTTTTCAGTGAAGGAAGTTGATGGGAAAGCTCATCTACATTCTTTGTTGGATTTTTCTTCACTTGCGATCACTTCCAAGTTAACATTTTCAAATTCTTGTTCTTCAATTTTATCTTCATGATTTTCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTAGAATCATTTTTCCAATTTGGGTGATGATAGGTTCTTTGAGAAAATCGGACATGGCCAAAATTTGAATTTTGAAATTCTTCTTCCGAATCACTTGAATCAGAATTCCAGCATTGTTTATGGAAGTACAATTGATTTTCTTGTTTGTACCAACTGCTGTCTTTTTTTTCCTACTATCAGGATGTGGCCAAAACCTTCTGTTATGATCATTTAGTGTCCTTTCTTGCCATTCATCATCAGTAGAAGTCCAATCTTGAAGTTCTTGGTTGTAATCTTGGTTTCTTGGAAGAGGTTCTTGATAATCTTGGACTGGTCTCCTTCTTTCTTGAGCCCCAAATCTTCTTTCTCGAAGATTTCATTCAGCACTATGAATTCCAGTACCACGAACGTCATGCTGATTATTGAAGTTCTTCTGATTTCCTCTTGCTCGCCAGCCTCTTCTGTCGTCAAAATTGTGGCCGTTTGCTGCATTTGCTTCTAGCCGTGGTGGTGCCGGTAGTTCATCCATCCTCCTATTCAGTAGTTCAAAGTTATCCATCACTTTGTCGATCTTTCTATGTAGATCTCCCAAAGATTCCTCAACGGCCAGCAAGCGAACCGTTGATGTCCTTGGAGAGAGGGTGGCGATCTCCTCCACCTCTTCTTGCTCGCGGTTGTCCCCCGCGGCGGGGATTCTTCTCAGGCCAGCCATCCGTCTGAGGATCGGGGCTGCTCTGATACCACTTGATGTAAATCAAAGTAGAATTATTTCTCAAAATGAATTCTCTGCCTCTAATGGCTAAGAGAAGGGGTATTTATTAAAATGTGTAAGTAGTTACAAGTAGTTGATATAACTGTTTTTATGAAACAGGTTTAACAGTTGGCAGTTTAAACAATTAAATTGTTTTACTAACTATCTACAGCTGTTAGTTAACAGTTTAAACAATTAAATTGTTTTACTAACTATCTACAGCTGTTAGTTAACAGTTTAAACAATTAAATTGTTTTACTAACTATCTACAGCTGTTAGTTAACAGTTTAAACAATTAAATTGTTTTACTAACTATCTACAGCTGTTAGTTAACAGTTTAAACAATTAAATTGTTTTACTAACTATCTACAGCTGTTAGTTAACAGTTTAAACAATTAAATTGTTTTACTAACTATCTACAGCTGTTAGTTAACAGTTTAAACAATTAAATTGTTTTACTAACTATCTACAGCTGTTAGTTAACAGTTTAAACAATTAAATTGTTTTACTAACTATCTACAGCTGTTAGTTAACAGTTTAAACAATTAAATTGTTTTACTAACTATCTACAGCTGTTAGTTAACAGTTTAAACAATTAAATTGTTTTACTAACTATTCTATATTACATCAAAGACTCTTTGGTTTCTTTCAAACCACAAATCAGTCAACACAGCTTTCACCTCATTACTCCACAGGATTTGTTTGTTCTTTTTAAGCTTTGGCCCTGCCAAAATCTGAAAAACATTGCTTGCGGCTGGTTTTCCAAAAACCCAGTTGATGTAAAATAACTTAAACTAACTAACAATTTGGAGCATAATTGCACTCAAAGAGGATGTGCTGAATGTCTTCCTCTTCTCCTTTGCACAGTGCGCAAATGCTTGGTGACAAACAATGGGAAGGACACTTTCTTTGGTTTACCGAGGAGCAATTTAAGTGACCAAAAGTTAATAAACCAAACCGAAATAGTAAATCGTCTAGGACTTTTCATCTTCCATAATTCCTTCTTTAGTGTCGTGTCAAGTGGAGAAGCCAAAGAGAGATGATTTACCAATGATTTAACTGTGAAGGATCCATTTGCTTCAGAGAACCAAAAGCGTTTGTTGCTAGAAACTGTCACCTTTTCCTTGGCTATGATAATTAACAAAATTTGGAAGCCAAGTATCTCATCATCCTTTAAAAATCTTATAAAAGAAATGGACCATGAAGAAGTATCTTGATCCCAATGATCCGCAATCGAACTACTAGGGCATCAAAGCAACAGAGAATTGAAACATCAGTAAAGAGCTTAATAAAAAGAAAATATAACCACTTTGTGAAAAAGTGCCCACTTCAGACTTAAATTTTGTATTCCACGTGCTTCAATTTGAAAGAAGGACAACACCAAGAAGAGGCAATCAGTTGCCTCAAAACTTTCCAACCCTAATAATTCTTTGCCCAGTGGTCTTTACCCTCCACGGATAATCATGCAAACAAACAGAACATCCAAAAAGTTAACTTTTAAGCTAATAACTTCAATCAAAAGTCTTTGCTCTCTCTCCCATGTGGAAAAAGACTTATTAGAAAGACAAACAGAGGTTCAAAATCAGGGGCGGACTGCAATCAGCAGTTAAAGTATCAAACAAAGATCAAACCACAATCAGCAGGATTTTGCAAGACTGGAAATGAGAGCGAGTAACTGTGGATATCTTTTCAACTTTTAGTTCTTCCTCGCATTGAAACAAAGCACTAAGATCGGTCTCTAGAAGCTCAAAATGACCCTGCCTCTCAAGCTCAGCTGACTTCTCAAAGTCAAAAGAGCTATTTTCTCACTACTGACACTAAAAGGAGAGTCAAAAGAAACCTCACCCTTCTTCTTCGGGCTAATGCATAAACTGTGGAGAAAGAAGAGATTGTGAAGCTAACCCAGTAGAAGGGGCTGAAACAAGTGCTTGGGTGCAGCCCCTTCTACCTTTTGCAAAGAAAAAACTTCTCTCCGATCTTGGACATAACTTTTTTATCCCAAGGGACCAAACATTGGTGGAACGAGACAAGGGAAGAGCTGGCTGGTAACTTTTTAAATATTTTCTGACAGTTTATGAGGCTTTGAATTGTTGAAGTTTTCTGATTTAACAAAAGTGCTTATGGCAAGAGGAACTCGAAATTATTGTTTAAATAGTCACATTCAACCTTTTCATCCTTCATAACATGATTTAATCTAACATCAATTGAGTTTGAAAATCACAAAAAAGTAGCTCTTATGTGACAAAGCTATGTGGATCTAAAGAAGAAATATCACCAAAATTCAAGAAAAAATTCCTTCTCTTCTCATGATTAATCTCAATTGTTGCTTGAATGAATATACATAGATTCTCTTAACTTGTATTTTGGCTTCAGAAACATTTAAGAAAATCAAAGTTTCCCTGGAAAATGTCTTCTAAGCCCCCAAAGTAAGCCCGGATGACCTCAAAAGTTTGATTATTCCAGTAATTTGTAGGAAGGTTCCTGATCGAGACCCAACCATCATAACCTCTTTGGTACAAAGGTCTACTATGAACTAACTTATCCCATTTCTAAACTCCAAGTGAAAAGTGCCGAACTCCTGCCATTTCCCAGGTTGCTCTATAAGATCATCTATCATACCTTGACCAAAATCAATCGAAGAATTCTTTGATGAATACCAATGATTGAAAGTGCAATTGTAGCTATTGCAAGTAGAGACAAAGAGCAAACACAAGTTTTATGTGGAAACCCTAGTTTAGGGAGAAAAACCACGGTGCAAATCTTTCTTACCATTTTCTTATATCACTAATGATATAGGGGAGCATTAATTTACAGGCAGTAGAAGCCTAATTAAAATAATAAAAGATAATTAGGGCAACATAAAAGACAAAAAATAAAACCCTTGGACTTTCAACATACACCAAGCCTGCTAATTCTAACACTCCCCCTCAAGTTCTGCTGTAAATCTAAAAAAGACCCAACTTGCTAACACAAGACTCGAAACTTTGTCTTGTGTTCACACTCCAATACAAGGCAGATAGAACTCTTGACAGACACAAGACAAGGTTAGTTGAAAAGGGTTTACTCAGATCTATGGTGTCGACTACTCGGAAACTTTTTCCTAGTTGCAAAACTAAATACAGTTAGAGTCCTGTTATTTGTTTCTATGAACAAAGAGTAGCCTCTATATCAGTTGGATGTTAATGTGTTCTTGAATCGAGGCCTAGAAGAGGAAGTCCATATGAGCCCCCCAAAGTTTGAAGCCCAATTCGATCATCAGGTTTGTAAAGTTAAGAAATCTTTATATGGACTGAAACAATCACCAAGAGCATGGTTTGATAGGTTTACTACCATAGTCAAGTCCCAAGGGTACAATTTGGGGCACTCTGACCACACTTTGTTTATAAAAGTCTCCAAGGCTAGGAAGATTACAGTGTTGATTGTTTATGTTGATGACATCATTTTATCTGGGGATGACATTGCTGAGATCATCCAATTGAAAAAGAGGTTGGTGATGACTTTGAAATCAAAAACTTGAAAAATCTAAAATATTTTCTTGGGATGAGGTAGCTTGATCCAAAGAAGGTATCTCCATATCTCAGAGGAAGTATACCCTTGATTTGTTAACCGAGTCACTGAGACAGGTATGCTTGGATGTCGTTCTGCTGATACTCCCATTGAATTCAACTGCAAACTGGAAAATTAGGGTGATAAAGTTCTAGTTGATAAAGAACAATATCAGCGGCTTTTGAGAAAGTTGATTTACTTGTCACATACTCGACCAAATATTTCCTATGTTGAGTGCCATTAGTTCATGCAGGCTCCGTATGAGAAACGCATGAAGGCAGGTAACAAAATTTTGAGGTATTTAAAAAAATCCCTAGTAAAGGGTTGATGTTGAAGAAGATAGATAGGAAAGCTATTAAGGCGAGACCTGTACTGACTCTGACTAGGCCGAGTCTGTTGTTGATAAGAAATCCACTTTCGGTTACTGTACCTTTGTATAGGGAAATCTCGTAACTCGGAGAAGTAAGAAGCAAGAGGTTGTGGCCAAAAGCAGTGTTGAGGCGGGATTGTGGCTATGAGTTTGGGGATATGTGAAGAAATTTGGCCCTTGAAAGTTTTATCTGACCTTCATCAGGATTGCGAGGTGCTGATGAAATTATTTTGTAATAATAAGGCAACTATTAGCATCGCCAACAATCCAGTTCAACATGATAGAATTAAACATCTGGAGATTGATCGACACTTTATTAAAGAAAAACTGGACAATGATTAGCATATGCATTTCATACATTCCCTGGAGCCAACAGGTTGCTGATGTTCTCACCAAATGGCTTCTTAGATAGAATTTTGGCTTTTGTTTTAGTAAGTTGGGTCTCATTGATATCTACGTCCCGACTTGAGGGAGAGTGTTAGAATTAGTGGGTTCGGCCCAAGTAAGGATTTACCCAACTTTCTATTCCTTTTTTATCATAAGCATGTTGCCTATTTATCTTCCCCTTTGTATCGTTTGTTAATATGAGAAATTAACAAGAAAATCAATCGTGGTTTTTCTCTTGGTACTTGGGTTTCCATGTGGTGTCTACTTTACTTTACCGCTTTCAAAAGCATTAATTTCTAATATGAAGTTGGAAGAGCGTTTCGAAATCTCCTTTCGGCATAGTGTTTGACTTTCTTTTGCACTTTTATGTCATCTATGAAATTGTTTCTTGTTGTAAAATATTTTTACACATAAACAGGTGCAGTGGTGTAATGGGTAAATATGCTGCTGGAGAACTCAGGCCACCCACATCAGGTTTGTGAACATTTTACTTAAATGTCGAACTATGAAGTGGTATTTCACTTGATGTAACAGATTTGCAACTTATCTACGTTTTGATAATAATAAAATATGTGCTAAAAATTGTACGGAATGAACAAGGAGTGGGCAAAGGGGTATAAACCAGTGTTCCTTTACTGTTTGACATATAAAACAATGGTTAACAAAGGTATGGAGATCTTTTATAATTTGTGGCCAAAATTATCAAGCAGAGACTAAGTCAAAAGTCTTAAATTCTGTTTGGCATATAAACAAGATCTTGAACTCATTTCTTGGACAATCATTTACTTTTGTTGCTGAATAATATCTCAAAATTTTTATTGAAGCAAAAATAAGTTTTATTGCTGAATAATACCGTTAGCATAAGGATCAAAATATTTTCACTGATCTCACTTTTATTGCTGAATAATACCTCATTAAATCTTTCATTTTATGTCTCAAGTCTTAAGGCTATGTGTCTAACATTAGAAATTGGAATACAAATATTTATTATGTTATAATATGTGTTTATATTGAAATTATGTATAGTCACCCTTTATTGTAATTTTACGTTCCCTAGATTAGAGTTTCTTAGTTGCCTATATATATCTATCTTCGGTCTGATTAATAGATATGATCATTATATTCTCCAATGGGATATGCGGAGAGGAAACCATCTCCACTTCTCTAATCCAAATCCAAATTAATAAAAAGAAAAAAATAGTGTTTCTTGGGAAGATCAATGGGTGGAGGATAGACCCTTCTTATCAATGTTTCCTCAATTATATCATTTGTCCTCCTTTAAATTGGTCATGTGTCTATTCGGGTTTGGTTGGAAAACTATGTCTTTCTACTTTGGTTTTCGTCATTTGTTGTTCAATAGGGAAACAATGTTGGTGGCCTTTCTTCAACCACTGGTCGAGGATTTTAACTTTAGGCTTGGGAGACAGGATATTCAGGTCTAGAGTCCTAATCCTTTACAGGGCTTCTCTTATAAGTCTTTCTTTATGATTTCATTGGCTTGTCTTCTGTTTGTGAATCAGTCTTTGATGCTTTATGGAGGATTAACATTCTAAAGAAAGTCAAGTTTTTATCTTGGCAAGTTTTGTTTGGTCGTGTGAACACAATGGATAGCATTTTTTAAAGAAAGATGCCTTTGTTAATGGGTCCTTTGTGTTGTATCCTCCTTTATCAGAAAGTGGAGGGATGGATCACCATTTCTGGGAGTCAGTTTGTGAGGTCTATGTGGAATTGTTTCTTTCTAGAGGTTGGCTTCATGTTAACTCGACAAAGAGATGTTCTTTTGATGATTAGGGAGTTCTTTCTCCATCTGCCTTTCCATGAGAAATGTTGCTTTTTGTGGTTTGAGGGGTGTGTGCTTTGTTGTGGGATCTTTGGGGCAGAGGATCAATAGTGTGTTTTGAGGTGTTAAAGGGACCCTAGTGAGCGTTGGTCCTTGGTGAGGTTCCATGTTTCTCTTTGGGTTTGTAATTATTCCCTAGGCAACATCTTAGTTGGAATCCTCTCTAGTGGCTTTTTTTTGGGAGCTTGGTTTTTTCTGTATGCCCTAAGCAGTTGTTTCTAAAAGTTAAAAAAAGGAAAATAAACTGCGTATTTTCATGCTCTTTTAGATTTGTTTTCTTGTTTAACTTTTTCATTTTGTATCCCTGTGTATCTTAGTTGTAAAAATAATGAAAAATGTTCTCTCTCCAAAAGAAACAGTTACTTCTCTGAGATTCTTTCTTGGTTAAATGAACAAGCCTTATGACTTGAAGTGAAAACACATCATACCATATTTTTTAGTAGTGTGTTAGTTAATGTTGTTTACTAGAATATGTACCTCAATTTCATCCTTAAAGCAAGGATATTACCCAGCAGGTTTTCTTGTCTATAGCTTCTTCTCGTGGATCTGGAAAACACCCTCAGCTTATTCCATCAACTCCAAGGTGGGCTGTTGCAAATGGTGCTGGAGTCATATTAAGTGTTTGTGATGAAGAAGTTGCCCGGTATGAGACTGCAACTCTTACGGCAGCTGCTGTTCCTGCGCTTCTTCTTCCTCCCCCCACAACAGCTTTGGATGAACATTTAGTTGCAGGGCTACCAGCTCTTGAGCCATATGCACGCTTATTTCATAGGTTAGCTTATCTAAACCTTCAAAGAAAAACAAATGTCAAGTCCTTTATGTTGGTTCTTGTAATTCAACTTTTCCTCCCCAGCGCAGGTATTATGCCATTGCTACTCCAAGTGCCACCCAAAGGCTTCTTCTTGGACTCTTAGAAGCACCTCCATCTTGGGCTCCAGATGCACTTGATGCAGCTGTACAGCTTGTAGAACTCCTTCGAGCTGCTGAAGAGTATGCAACTGGCATTAGGGTAAGTCGGATACTATACCATGCTAAGACATGTTGGTTAAGTCATTCATGA

mRNA sequence

ATGGCTGTTATTGAGAAGTACTCTTCGATCTTCTATGTTGGTTCTGGAAGTAGTAGAGTGCCCCCTTATGTTAGGCTCTCCAATAAAGCTGAAATGATTGCTAGTGAAGAAGATAAGCTGTTGATGCTGTCTGTTGATTGTCGAGTACCGCTCGAGAATATAGAATTCATTGCATCTGAATTGGGTTTGCCTTGTGACTTCAAAACTTCATTGATTCCTAAGTACCCTGAATTCTTTTCAGTGAAGGAACCCCTTCTACCTTTTGCAAAGAAAAAACTTCTCTCCGATCTTGGACATAACTTTTTTATCCCAAGGGACCAAACATTGGTGGAACGAGACAAGGGAAGAGCTGGCTGGTGCAGTGGTGTAATGGGTAAATATGCTGCTGGAGAACTCAGGCCACCCACATCAGCTTCTTCTCGTGGATCTGGAAAACACCCTCAGCTTATTCCATCAACTCCAAGGTGGGCTGTTGCAAATGGTGCTGGAGTCATATTAAGTGTTTGTGATGAAGAAGTTGCCCGGTATGAGACTGCAACTCTTACGGCAGCTGCTGTTCCTGCGCTTCTTCTTCCTCCCCCCACAACAGCTTTGGATGAACATTTAGTTGCAGGGCTACCAGCTCTTGAGCCATATGCACGCTTATTTCATAGGTATTATGCCATTGCTACTCCAAGTGCCACCCAAAGGCTTCTTCTTGGACTCTTAGAAGCACCTCCATCTTGGGCTCCAGATGCACTTGATGCAGCTGTACAGCTTGTAGAACTCCTTCGAGCTGCTGAAGAGTATGCAACTGGCATTAGGGTAAGTCGGATACTATACCATGCTAAGACATGTTGGTTAAGTCATTCATGA

Coding sequence (CDS)

ATGGCTGTTATTGAGAAGTACTCTTCGATCTTCTATGTTGGTTCTGGAAGTAGTAGAGTGCCCCCTTATGTTAGGCTCTCCAATAAAGCTGAAATGATTGCTAGTGAAGAAGATAAGCTGTTGATGCTGTCTGTTGATTGTCGAGTACCGCTCGAGAATATAGAATTCATTGCATCTGAATTGGGTTTGCCTTGTGACTTCAAAACTTCATTGATTCCTAAGTACCCTGAATTCTTTTCAGTGAAGGAACCCCTTCTACCTTTTGCAAAGAAAAAACTTCTCTCCGATCTTGGACATAACTTTTTTATCCCAAGGGACCAAACATTGGTGGAACGAGACAAGGGAAGAGCTGGCTGGTGCAGTGGTGTAATGGGTAAATATGCTGCTGGAGAACTCAGGCCACCCACATCAGCTTCTTCTCGTGGATCTGGAAAACACCCTCAGCTTATTCCATCAACTCCAAGGTGGGCTGTTGCAAATGGTGCTGGAGTCATATTAAGTGTTTGTGATGAAGAAGTTGCCCGGTATGAGACTGCAACTCTTACGGCAGCTGCTGTTCCTGCGCTTCTTCTTCCTCCCCCCACAACAGCTTTGGATGAACATTTAGTTGCAGGGCTACCAGCTCTTGAGCCATATGCACGCTTATTTCATAGGTATTATGCCATTGCTACTCCAAGTGCCACCCAAAGGCTTCTTCTTGGACTCTTAGAAGCACCTCCATCTTGGGCTCCAGATGCACTTGATGCAGCTGTACAGCTTGTAGAACTCCTTCGAGCTGCTGAAGAGTATGCAACTGGCATTAGGGTAAGTCGGATACTATACCATGCTAAGACATGTTGGTTAAGTCATTCATGA

Protein sequence

MAVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEEDKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPKYPEFFSVKEPLLPFAKKKLLSDLGHNFFIPRDQTLVERDKGRAGWCSGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYETATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEEYATGIRVSRILYHAKTCWLSHS*

Homology

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BLAST of Csa7G293730 vs. Swiss-Prot
Match: GIGAN_ARATH (Protein GIGANTEA OS=Arabidopsis thaliana GN=GI PE=1 SV=2)

HSP 1 Score: 287.3 bits (734), Expect = 1.8e-76
Identity = 142/157 (90.45%), Postives = 148/157 (94.27%), Query Frame = 1


Query: 119 WCSGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET 178
           WCSGVMGKYAAGEL+PPT AS RGSGKHPQL+PSTPRWAVANGAGVILSVCD+EVARYET
Sbjct: 212 WCSGVMGKYAAGELKPPTIAS-RGSGKHPQLMPSTPRWAVANGAGVILSVCDDEVARYET 271

Query: 179 ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 238
           ATLTA AVPALLLPPPTT+LDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA
Sbjct: 272 ATLTAVAVPALLLPPPTTSLDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 331

Query: 239 PPSWAPDALDAAVQLVELLRAAEEYATGIRVSRILYH 276
           PPSWAPDALDAAVQLVELLRAAE+YA+G+R+ R   H
Sbjct: 332 PPSWAPDALDAAVQLVELLRAAEDYASGVRLPRNWMH 367

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BLAST of Csa7G293730 vs. Swiss-Prot
Match: GIGAN_ORYSJ (Protein GIGANTEA OS=Oryza sativa subsp. japonica GN=GI PE=2 SV=2)

HSP 1 Score: 278.5 bits (711), Expect = 8.3e-74
Identity = 138/158 (87.34%), Postives = 144/158 (91.14%), Query Frame = 1


Query: 119 WCSGVMGKYAAG-ELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYE 178
           WC GVMGKYAAG EL+PPT+A SRGSGKHPQL+PSTPRWAVANGAGVILSVCDEEVARYE
Sbjct: 213 WCGGVMGKYAAGGELKPPTTAYSRGSGKHPQLMPSTPRWAVANGAGVILSVCDEEVARYE 272

Query: 179 TATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLE 238
           TA LTAAAVPALLLPPPTT LDEHLVAGLP LEPYARLFHRYYAIATPSATQRLL GLLE
Sbjct: 273 TANLTAAAVPALLLPPPTTPLDEHLVAGLPPLEPYARLFHRYYAIATPSATQRLLFGLLE 332

Query: 239 APPSWAPDALDAAVQLVELLRAAEEYATGIRVSRILYH 276
           APPSWAPDALDAAVQLVELLRAAE+Y +G+R+ +   H
Sbjct: 333 APPSWAPDALDAAVQLVELLRAAEDYDSGMRLPKNWMH 370

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BLAST of Csa7G293730 vs. TrEMBL
Match: A0A0A0K433_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G293730 PE=4 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 2.6e-159
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1


Query: 1   MAVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEEDKLLMLSVDCRVPLENIEFIASE 60
           MAVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEEDKLLMLSVDCRVPLENIEFIASE
Sbjct: 1   MAVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEEDKLLMLSVDCRVPLENIEFIASE 60

Query: 61  LGLPCDFKTSLIPKYPEFFSVKEPLLPFAKKKLLSDLGHNFFIPRDQTLVERDKGRAGWC 120
           LGLPCDFKTSLIPKYPEFFSVKEPLLPFAKKKLLSDLGHNFFIPRDQTLVERDKGRAGWC
Sbjct: 61  LGLPCDFKTSLIPKYPEFFSVKEPLLPFAKKKLLSDLGHNFFIPRDQTLVERDKGRAGWC 120

Query: 121 SGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYETAT 180
           SGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYETAT
Sbjct: 121 SGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYETAT 180

Query: 181 LTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEAPP 240
           LTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEAPP
Sbjct: 181 LTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEAPP 240

Query: 241 SWAPDALDAAVQLVELLRAAEEYATGIRVSRILYHAKTCWLSHS 285
           SWAPDALDAAVQLVELLRAAEEYATGIRVSRILYHAKTCWLSHS
Sbjct: 241 SWAPDALDAAVQLVELLRAAEEYATGIRVSRILYHAKTCWLSHS 284

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BLAST of Csa7G293730 vs. TrEMBL
Match: B9H7W3_POPTR (GIGANTEA family protein OS=Populus trichocarpa GN=POPTR_0005s21870g PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 8.6e-78
Identity = 147/157 (93.63%), Postives = 152/157 (96.82%), Query Frame = 1


Query: 119 WCSGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET 178
           WCSGVMGKYAAGEL+PPT+ SSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET
Sbjct: 212 WCSGVMGKYAAGELKPPTTTSSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET 271

Query: 179 ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 238
           ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA
Sbjct: 272 ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 331

Query: 239 PPSWAPDALDAAVQLVELLRAAEEYATGIRVSRILYH 276
           PPSWAPDALDAAVQLVELLRAAE+YA+GIR+ R   H
Sbjct: 332 PPSWAPDALDAAVQLVELLRAAEDYASGIRLPRNWMH 368

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BLAST of Csa7G293730 vs. TrEMBL
Match: A0A0D2QN78_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G258800 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.5e-77
Identity = 146/157 (92.99%), Postives = 153/157 (97.45%), Query Frame = 1


Query: 119 WCSGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET 178
           WCSGVMGKYAAG+L+PPT+ASSRGSGKHPQL+PSTPRWAVANGAGVILSVCDEEVARYET
Sbjct: 212 WCSGVMGKYAAGDLKPPTTASSRGSGKHPQLMPSTPRWAVANGAGVILSVCDEEVARYET 271

Query: 179 ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 238
           A+LTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA
Sbjct: 272 ASLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 331

Query: 239 PPSWAPDALDAAVQLVELLRAAEEYATGIRVSRILYH 276
           PPSWAPDALDAAVQLVELLRAAE+YATGIR+ R   H
Sbjct: 332 PPSWAPDALDAAVQLVELLRAAEDYATGIRLPRNWMH 368

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BLAST of Csa7G293730 vs. TrEMBL
Match: A0A061FJH7_THECC (Gigantea protein isoform 1 OS=Theobroma cacao GN=TCM_035715 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.5e-77
Identity = 146/157 (92.99%), Postives = 153/157 (97.45%), Query Frame = 1


Query: 119 WCSGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET 178
           WCSGVMGKYAAG+L+PP++ASSRGSGKHPQL+PSTPRWAVANGAGVILSVCDEEVARYET
Sbjct: 212 WCSGVMGKYAAGDLKPPSTASSRGSGKHPQLMPSTPRWAVANGAGVILSVCDEEVARYET 271

Query: 179 ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 238
           ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA
Sbjct: 272 ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 331

Query: 239 PPSWAPDALDAAVQLVELLRAAEEYATGIRVSRILYH 276
           PPSWAPDALDAAVQLVELLRAAE+YATGIR+ R   H
Sbjct: 332 PPSWAPDALDAAVQLVELLRAAEDYATGIRLPRNWMH 368

[Close]

BLAST of Csa7G293730 vs. TrEMBL
Match: A0A061FQM1_THECC (Gigantea protein isoform 4 OS=Theobroma cacao GN=TCM_035715 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.5e-77
Identity = 146/157 (92.99%), Postives = 153/157 (97.45%), Query Frame = 1


Query: 119 WCSGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET 178
           WCSGVMGKYAAG+L+PP++ASSRGSGKHPQL+PSTPRWAVANGAGVILSVCDEEVARYET
Sbjct: 212 WCSGVMGKYAAGDLKPPSTASSRGSGKHPQLMPSTPRWAVANGAGVILSVCDEEVARYET 271

Query: 179 ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 238
           ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA
Sbjct: 272 ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 331

Query: 239 PPSWAPDALDAAVQLVELLRAAEEYATGIRVSRILYH 276
           PPSWAPDALDAAVQLVELLRAAE+YATGIR+ R   H
Sbjct: 332 PPSWAPDALDAAVQLVELLRAAEDYATGIRLPRNWMH 368

[Close]

BLAST of Csa7G293730 vs. TAIR10
Match: AT1G22770.1 (AT1G22770.1 gigantea protein (GI))

HSP 1 Score: 287.3 bits (734), Expect = 1.0e-77
Identity = 142/157 (90.45%), Postives = 148/157 (94.27%), Query Frame = 1


Query: 119 WCSGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET 178
           WCSGVMGKYAAGEL+PPT AS RGSGKHPQL+PSTPRWAVANGAGVILSVCD+EVARYET
Sbjct: 212 WCSGVMGKYAAGELKPPTIAS-RGSGKHPQLMPSTPRWAVANGAGVILSVCDDEVARYET 271

Query: 179 ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 238
           ATLTA AVPALLLPPPTT+LDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA
Sbjct: 272 ATLTAVAVPALLLPPPTTSLDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 331

Query: 239 PPSWAPDALDAAVQLVELLRAAEEYATGIRVSRILYH 276
           PPSWAPDALDAAVQLVELLRAAE+YA+G+R+ R   H
Sbjct: 332 PPSWAPDALDAAVQLVELLRAAEDYASGVRLPRNWMH 367

[Close]

BLAST of Csa7G293730 vs. TAIR10
Match: AT1G79120.1 (AT1G79120.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 102.1 bits (253), Expect = 6.0e-22
Identity = 55/97 (56.70%), Postives = 64/97 (65.98%), Query Frame = 1


Query: 1   MAVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEED---------------KLLMLSV 60
           MA IEKY +IFYVG G    PP+V L+ KA+ IA+EE                KLLM+SV
Sbjct: 114 MAAIEKYPTIFYVGGGHKE-PPFVMLTEKAKKIAAEESEATESMEPILVNNLRKLLMMSV 173

Query: 61  DCRVPLENIEFIASELGLPCDFKTSLIPKYPEFFSVK 83
           DCRVPLE +EFI S +GLP DFK++LIPKY EFFS+K
Sbjct: 174 DCRVPLEKVEFIQSAMGLPQDFKSTLIPKYTEFFSLK 209

[Close]

BLAST of Csa7G293730 vs. TAIR10
Match: AT4G24320.1 (AT4G24320.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 48.9 bits (115), Expect = 6.0e-06
Identity = 34/99 (34.34%), Postives = 46/99 (46.46%), Query Frame = 1


Query: 2   AVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEED-----------------KLLMLS 61
           A  +KY S+F     S   P +VRL+ +A  +  EE+                 K LML+
Sbjct: 79  AFFQKYPSVFTTFQPSPSHPLHVRLTPQALTLHKEEETIHLSPPQRNVTVQRLTKFLMLT 138

Query: 62  VDCRVPLENIEFIASELGLPCDFKTSLIPKYPEFFSVKE 84
               +PL  ++    +LGLP D+ TSLI  YPE+F V E
Sbjct: 139 GAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTE 177

[Close]

BLAST of Csa7G293730 vs. NCBI nr
Match: gi|700189222|gb|KGN44455.1| (hypothetical protein Csa_7G293730 [Cucumis sativus])

HSP 1 Score: 569.3 bits (1466), Expect = 3.7e-159
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1


Query: 1   MAVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEEDKLLMLSVDCRVPLENIEFIASE 60
           MAVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEEDKLLMLSVDCRVPLENIEFIASE
Sbjct: 1   MAVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEEDKLLMLSVDCRVPLENIEFIASE 60

Query: 61  LGLPCDFKTSLIPKYPEFFSVKEPLLPFAKKKLLSDLGHNFFIPRDQTLVERDKGRAGWC 120
           LGLPCDFKTSLIPKYPEFFSVKEPLLPFAKKKLLSDLGHNFFIPRDQTLVERDKGRAGWC
Sbjct: 61  LGLPCDFKTSLIPKYPEFFSVKEPLLPFAKKKLLSDLGHNFFIPRDQTLVERDKGRAGWC 120

Query: 121 SGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYETAT 180
           SGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYETAT
Sbjct: 121 SGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYETAT 180

Query: 181 LTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEAPP 240
           LTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEAPP
Sbjct: 181 LTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEAPP 240

Query: 241 SWAPDALDAAVQLVELLRAAEEYATGIRVSRILYHAKTCWLSHS 285
           SWAPDALDAAVQLVELLRAAEEYATGIRVSRILYHAKTCWLSHS
Sbjct: 241 SWAPDALDAAVQLVELLRAAEEYATGIRVSRILYHAKTCWLSHS 284

[Close]

BLAST of Csa7G293730 vs. NCBI nr
Match: gi|778726488|ref|XP_011659108.1| (PREDICTED: protein GIGANTEA isoform X1 [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 1.3e-79
Identity = 152/157 (96.82%), Postives = 153/157 (97.45%), Query Frame = 1


Query: 119 WCSGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET 178
           WCSGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET
Sbjct: 210 WCSGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET 269

Query: 179 ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 238
           ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA
Sbjct: 270 ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 329

Query: 239 PPSWAPDALDAAVQLVELLRAAEEYATGIRVSRILYH 276
           PPSWAPDALDAAVQLVELLRAAEEYATGIR+ R   H
Sbjct: 330 PPSWAPDALDAAVQLVELLRAAEEYATGIRLPRNWMH 366

[Close]

BLAST of Csa7G293730 vs. NCBI nr
Match: gi|659123936|ref|XP_008461912.1| (PREDICTED: protein GIGANTEA-like isoform X1 [Cucumis melo])

HSP 1 Score: 305.1 bits (780), Expect = 1.3e-79
Identity = 152/157 (96.82%), Postives = 153/157 (97.45%), Query Frame = 1


Query: 119 WCSGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET 178
           WCSGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET
Sbjct: 210 WCSGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET 269

Query: 179 ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 238
           ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA
Sbjct: 270 ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 329

Query: 239 PPSWAPDALDAAVQLVELLRAAEEYATGIRVSRILYH 276
           PPSWAPDALDAAVQLVELLRAAEEYATGIR+ R   H
Sbjct: 330 PPSWAPDALDAAVQLVELLRAAEEYATGIRLPRNWMH 366

[Close]

BLAST of Csa7G293730 vs. NCBI nr
Match: gi|224085197|ref|XP_002307516.1| (GIGANTEA family protein [Populus trichocarpa])

HSP 1 Score: 298.5 bits (763), Expect = 1.2e-77
Identity = 147/157 (93.63%), Postives = 152/157 (96.82%), Query Frame = 1


Query: 119 WCSGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET 178
           WCSGVMGKYAAGEL+PPT+ SSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET
Sbjct: 212 WCSGVMGKYAAGELKPPTTTSSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET 271

Query: 179 ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 238
           ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA
Sbjct: 272 ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 331

Query: 239 PPSWAPDALDAAVQLVELLRAAEEYATGIRVSRILYH 276
           PPSWAPDALDAAVQLVELLRAAE+YA+GIR+ R   H
Sbjct: 332 PPSWAPDALDAAVQLVELLRAAEDYASGIRLPRNWMH 368

[Close]

BLAST of Csa7G293730 vs. NCBI nr
Match: gi|743901898|ref|XP_011044276.1| (PREDICTED: protein GIGANTEA-like [Populus euphratica])

HSP 1 Score: 298.5 bits (763), Expect = 1.2e-77
Identity = 147/157 (93.63%), Postives = 152/157 (96.82%), Query Frame = 1


Query: 119 WCSGVMGKYAAGELRPPTSASSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET 178
           WCSGVMGKYAAGEL+PPT+ SSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET
Sbjct: 212 WCSGVMGKYAAGELKPPTTTSSRGSGKHPQLIPSTPRWAVANGAGVILSVCDEEVARYET 271

Query: 179 ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 238
           ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA
Sbjct: 272 ATLTAAAVPALLLPPPTTALDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEA 331

Query: 239 PPSWAPDALDAAVQLVELLRAAEEYATGIRVSRILYH 276
           PPSWAPDALDAAVQLVELLRAAE+YA+GIR+ R   H
Sbjct: 332 PPSWAPDALDAAVQLVELLRAAEDYASGIRLPRNWMH 368

The following BLAST results are available for this feature:

BLAST of Csa7G293730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GIGAN_ARATH	1.8e-76	90.45	Protein GIGANTEA OS=Arabidopsis thaliana GN=GI PE=1 SV=2	[more]
GIGAN_ORYSJ	8.3e-74	87.34	Protein GIGANTEA OS=Oryza sativa subsp. japonica GN=GI PE=2 SV=2	[more]

BLAST of Csa7G293730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K433_CUCSA	2.6e-159	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G293730 PE=4 SV=1	[more]
B9H7W3_POPTR	8.6e-78	93.63	GIGANTEA family protein OS=Populus trichocarpa GN=POPTR_0005s21870g PE=4 SV=1	[more]
A0A0D2QN78_GOSRA	1.5e-77	92.99	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G258800 PE=4 SV=1	[more]
A0A061FJH7_THECC	1.5e-77	92.99	Gigantea protein isoform 1 OS=Theobroma cacao GN=TCM_035715 PE=4 SV=1	[more]
A0A061FQM1_THECC	1.5e-77	92.99	Gigantea protein isoform 4 OS=Theobroma cacao GN=TCM_035715 PE=4 SV=1	[more]

BLAST of Csa7G293730 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G22770.1	1.0e-77	90.45	gigantea protein (GI)	[more]
AT1G79120.1	6.0e-22	56.70	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G24320.1	6.0e-06	34.34	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

BLAST of Csa7G293730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700189222\|gb\|KGN44455.1\|	3.7e-159	100.00	hypothetical protein Csa_7G293730 [Cucumis sativus]	[more]
gi\|778726488\|ref\|XP_011659108.1\|	1.3e-79	96.82	PREDICTED: protein GIGANTEA isoform X1 [Cucumis sativus]	[more]
gi\|659123936\|ref\|XP_008461912.1\|	1.3e-79	96.82	PREDICTED: protein GIGANTEA-like isoform X1 [Cucumis melo]	[more]
gi\|224085197\|ref\|XP_002307516.1\|	1.2e-77	93.63	GIGANTEA family protein [Populus trichocarpa]	[more]
gi\|743901898\|ref\|XP_011044276.1\|	1.2e-77	93.63	PREDICTED: protein GIGANTEA-like [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021099	PORR_domain
IPR026211	GIGANTEA

Vocabulary: **Biological Process**
Term	Definition
GO:2000028	regulation of photoperiodism, flowering

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048578	positive regulation of long-day photoperiodism, flowering
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009637	response to blue light
biological_process	GO:0009409	response to cold
biological_process	GO:0010218	response to far red light
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0010378	temperature compensation of the circadian clock
biological_process	GO:2000028	regulation of photoperiodism, flowering
biological_process	GO:0005982	starch metabolic process
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa7G293730.1	Csa7G293730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 3..83 score: 2.4
IPR026211	GIGANTEA	PRINTS	PR02081	GIGANTEA	coord: 111..129 score: 2.1E-77coord: 140..158 score: 2.1E-77coord: 234..253 score: 2.1E-77coord: 253..273 score: 2.1E-77coord: 185..203 score: 2.1E-77coord: 158..179 score: 2.1E-77coord: 209..229 score: 2.1
None	No IPR available	PANTHER	PTHR36319	FAMILY NOT NAMED	coord: 119..275 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa7G293730	Cla016392	Watermelon (97103) v1	cuwmB567
Csa7G293730	CSPI07G12490	Wild cucumber (PI 183967)	cpicuB354
Csa7G293730	Cucsa.079660	Cucumber (Gy14) v1	cgycuB076
Csa7G293730	Carg23312	Silver-seed gourd	carcuB0303

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa7G293730	Cucumber (Gy14) v2	cgybcuB323
Csa7G293730	Melon (DHL92) v3.6.1	cumedB503
Csa7G293730	Silver-seed gourd	carcuB0069
Csa7G293730	Silver-seed gourd	carcuB0674
Csa7G293730	Silver-seed gourd	carcuB0853
Csa7G293730	Watermelon (97103) v2	cuwmbB571
Csa7G293730	Wax gourd	cuwgoB707
Csa7G293730	Cucurbita maxima (Rimu)	cmacuB043
Csa7G293730	Cucurbita maxima (Rimu)	cmacuB317
Csa7G293730	Cucurbita maxima (Rimu)	cmacuB489
Csa7G293730	Cucurbita maxima (Rimu)	cmacuB777
Csa7G293730	Cucurbita moschata (Rifu)	cmocuB032
Csa7G293730	Cucurbita moschata (Rifu)	cmocuB305
Csa7G293730	Cucurbita moschata (Rifu)	cmocuB478
Csa7G293730	Cucurbita moschata (Rifu)	cmocuB771
Csa7G293730	Melon (DHL92) v3.5.1	cumeB525
Csa7G293730	Watermelon (Charleston Gray)	cuwcgB525
Csa7G293730	Cucurbita pepo (Zucchini)	cpecuB473
Csa7G293730	Cucurbita pepo (Zucchini)	cpecuB592
Csa7G293730	Cucurbita pepo (Zucchini)	cpecuB801
Csa7G293730	Bottle gourd (USVL1VR-Ls)	culsiB503