Csa7G290610 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G290610
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 10225025 .. 10225247 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAACTGGGAGAGAGCGATGTCGATCAAAGCAACCGACTTCAAATTAGCCAGAACAGTCGCAGTGTAGCATGCTGGTCATCATCCGATGAGTCATGCTTGTGGCTGGAGTACGTAGTGGATGACACACGATAGAGAGAGACGCAAGAGCGTCGACTGCGGATCGTTTGCGTGGGAGAGCGAGAAAGAGATGGTGGCGGGAGGGGGAGGTCAGCACTAA

mRNA sequence

ATGGAGGAACTGGGAGAGAGCGATGTCGATCAAAGCAACCGACTTCAAATTAGCCAGAACAGTCGCAGTGTAGCATGCTGGTCATCATCCGATGAGTCATGCTTGTGGCTGGAAGAGAGACGCAAGAGCGTCGACTGCGGATCGTTTGCGTGGGAGAGCGAGAAAGAGATGGTGGCGGGAGGGGGAGGTCAGCACTAA

Coding sequence (CDS)

ATGGAGGAACTGGGAGAGAGCGATGTCGATCAAAGCAACCGACTTCAAATTAGCCAGAACAGTCGCAGTGTAGCATGCTGGTCATCATCCGATGAGTCATGCTTGTGGCTGGAAGAGAGACGCAAGAGCGTCGACTGCGGATCGTTTGCGTGGGAGAGCGAGAAAGAGATGGTGGCGGGAGGGGGAGGTCAGCACTAA

Protein sequence

MEELGESDVDQSNRLQISQNSRSVACWSSSDESCLWLEERRKSVDCGSFAWESEKEMVAGGGGQH*
Homology
[Close]
BLAST of Csa7G290610 vs. TrEMBL
Match: A0A0A0K699_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290610 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 3.4e-30
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1 

Query: 1  MEELGESDVDQSNRLQISQNSRSVACWSSSDESCLWLEERRKSVDCGSFAWESEKEMVAG 60
          MEELGESDVDQSNRLQISQNSRSVACWSSSDESCLWLEERRKSVDCGSFAWESEKEMVAG
Sbjct: 1  MEELGESDVDQSNRLQISQNSRSVACWSSSDESCLWLEERRKSVDCGSFAWESEKEMVAG 60

Query: 61 GGGQH 66
          GGGQH
Sbjct: 61 GGGQH 65

[Close]
BLAST of Csa7G290610 vs. NCBI nr
Match: gi|700189206|gb|KGN44439.1| (hypothetical protein Csa_7G290610 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 4.9e-30
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1 

Query: 1  MEELGESDVDQSNRLQISQNSRSVACWSSSDESCLWLEERRKSVDCGSFAWESEKEMVAG 60
          MEELGESDVDQSNRLQISQNSRSVACWSSSDESCLWLEERRKSVDCGSFAWESEKEMVAG
Sbjct: 1  MEELGESDVDQSNRLQISQNSRSVACWSSSDESCLWLEERRKSVDCGSFAWESEKEMVAG 60

Query: 61 GGGQH 66
          GGGQH
Sbjct: 61 GGGQH 65

The following BLAST results are available for this feature:
BLAST of Csa7G290610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K699_CUCSA3.4e-30100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290610 PE=4 SV=1[more]
BLAST of Csa7G290610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189206|gb|KGN44439.1|4.9e-30100.00hypothetical protein Csa_7G290610 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G290610.1Csa7G290610.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G290610CSPI07G12330Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G290610Melon (DHL92) v3.6.1cumedB503
Csa7G290610Watermelon (97103) v2cuwmbB571
Csa7G290610Wax gourdcuwgoB707
Csa7G290610Cucumber (Gy14) v1cgycuB076
Csa7G290610Cucurbita maxima (Rimu)cmacuB039
Csa7G290610Cucurbita maxima (Rimu)cmacuB489
Csa7G290610Cucurbita moschata (Rifu)cmocuB029
Csa7G290610Cucurbita moschata (Rifu)cmocuB032
Csa7G290610Cucurbita moschata (Rifu)cmocuB478
Csa7G290610Melon (DHL92) v3.5.1cumeB542
Csa7G290610Watermelon (Charleston Gray)cuwcgB525
Csa7G290610Watermelon (97103) v1cuwmB567
Csa7G290610Cucurbita pepo (Zucchini)cpecuB592
Csa7G290610Cucurbita pepo (Zucchini)cpecuB801
Csa7G290610Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G290610Cucumber (Gy14) v2cgybcuB323