Csa7G290580 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G290580
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 10198152 .. 10198517 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGGAAATTACCGAAAAACGAGGGTAAATTTAGGAGGGCTTGGTTTTCAAATTAAAGACTTTTGGGAGAAATGGACATGTGAAACGTCCAAATCCATTGAAACCATAAACCTATCCTTTCACAATTTGGAACGTCTTGCACGACTGGTGAAAATGTTGGTTCCACCGAACGGTGGCAACACCATGGGACGAGGAAGGCGAGTTGGAGAGCAGCGGAGTGTTGGAGGGATCTGCTACATGGAACTACCCTGCTACTTGAGAACCTCAGCGAGAGCGGCACCTAATAAAAGACCGGTGAAAGACGCTTTCCATCGGACGACGTCGGCTATCACGGATTTTCTTTTTCATTCTTTTGCTTTGTAG

mRNA sequence

ATGAGGGGAAATTACCGAAAAACGAGGGTAAATTTAGGAGGGCTTGGTTTTCAAATTAAAGACTTTTGGGAGAAATGGACATGTGAAACGTCCAAATCCATTGAAACCATAAACCTATCCTTTCACAATTTGGAACGTCTTGCACGACTGGTGAAAATGTTGGTTCCACCGAACGGTGGCAACACCATGGGACGAGGAAGGCGAGTTGGAGAGCAGCGGAGTGTTGGAGGGATCTGCTACATGGAACTACCCTGCTACTTGAGAACCTCAGCGAGAGCGGCACCTAATAAAAGACCGGTGAAAGACGCTTTCCATCGGACGACGTCGGCTATCACGGATTTTCTTTTTCATTCTTTTGCTTTGTAG

Coding sequence (CDS)

ATGAGGGGAAATTACCGAAAAACGAGGGTAAATTTAGGAGGGCTTGGTTTTCAAATTAAAGACTTTTGGGAGAAATGGACATGTGAAACGTCCAAATCCATTGAAACCATAAACCTATCCTTTCACAATTTGGAACGTCTTGCACGACTGGTGAAAATGTTGGTTCCACCGAACGGTGGCAACACCATGGGACGAGGAAGGCGAGTTGGAGAGCAGCGGAGTGTTGGAGGGATCTGCTACATGGAACTACCCTGCTACTTGAGAACCTCAGCGAGAGCGGCACCTAATAAAAGACCGGTGAAAGACGCTTTCCATCGGACGACGTCGGCTATCACGGATTTTCTTTTTCATTCTTTTGCTTTGTAG

Protein sequence

MRGNYRKTRVNLGGLGFQIKDFWEKWTCETSKSIETINLSFHNLERLARLVKMLVPPNGGNTMGRGRRVGEQRSVGGICYMELPCYLRTSARAAPNKRPVKDAFHRTTSAITDFLFHSFAL*
Homology
[Close]
BLAST of Csa7G290580 vs. TrEMBL
Match: A0A0A0K410_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290580 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-64
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1 

Query: 1   MRGNYRKTRVNLGGLGFQIKDFWEKWTCETSKSIETINLSFHNLERLARLVKMLVPPNGG 60
           MRGNYRKTRVNLGGLGFQIKDFWEKWTCETSKSIETINLSFHNLERLARLVKMLVPPNGG
Sbjct: 1   MRGNYRKTRVNLGGLGFQIKDFWEKWTCETSKSIETINLSFHNLERLARLVKMLVPPNGG 60

Query: 61  NTMGRGRRVGEQRSVGGICYMELPCYLRTSARAAPNKRPVKDAFHRTTSAITDFLFHSFA 120
           NTMGRGRRVGEQRSVGGICYMELPCYLRTSARAAPNKRPVKDAFHRTTSAITDFLFHSFA
Sbjct: 61  NTMGRGRRVGEQRSVGGICYMELPCYLRTSARAAPNKRPVKDAFHRTTSAITDFLFHSFA 120

Query: 121 L 122
           L
Sbjct: 121 L 121

[Close]
BLAST of Csa7G290580 vs. NCBI nr
Match: gi|700189202|gb|KGN44435.1| (hypothetical protein Csa_7G290580 [Cucumis sativus])

HSP 1 Score: 253.4 bits (646), Expect = 1.9e-64
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1 

Query: 1   MRGNYRKTRVNLGGLGFQIKDFWEKWTCETSKSIETINLSFHNLERLARLVKMLVPPNGG 60
           MRGNYRKTRVNLGGLGFQIKDFWEKWTCETSKSIETINLSFHNLERLARLVKMLVPPNGG
Sbjct: 1   MRGNYRKTRVNLGGLGFQIKDFWEKWTCETSKSIETINLSFHNLERLARLVKMLVPPNGG 60

Query: 61  NTMGRGRRVGEQRSVGGICYMELPCYLRTSARAAPNKRPVKDAFHRTTSAITDFLFHSFA 120
           NTMGRGRRVGEQRSVGGICYMELPCYLRTSARAAPNKRPVKDAFHRTTSAITDFLFHSFA
Sbjct: 61  NTMGRGRRVGEQRSVGGICYMELPCYLRTSARAAPNKRPVKDAFHRTTSAITDFLFHSFA 120

Query: 121 L 122
           L
Sbjct: 121 L 121

The following BLAST results are available for this feature:
BLAST of Csa7G290580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K410_CUCSA1.4e-64100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290580 PE=4 SV=1[more]
BLAST of Csa7G290580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189202|gb|KGN44435.1|1.9e-64100.00hypothetical protein Csa_7G290580 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G290580.1Csa7G290580.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G290580CSPI07G12300Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G290580Cucurbita moschata (Rifu)cmocuB029
Csa7G290580Cucurbita moschata (Rifu)cmocuB032
Csa7G290580Cucurbita moschata (Rifu)cmocuB478
Csa7G290580Melon (DHL92) v3.5.1cumeB542
Csa7G290580Watermelon (Charleston Gray)cuwcgB525
Csa7G290580Watermelon (97103) v1cuwmB567
Csa7G290580Cucurbita pepo (Zucchini)cpecuB592
Csa7G290580Cucurbita pepo (Zucchini)cpecuB801
Csa7G290580Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G290580Cucumber (Gy14) v2cgybcuB323
Csa7G290580Melon (DHL92) v3.6.1cumedB503
Csa7G290580Silver-seed gourdcarcuB0006
Csa7G290580Watermelon (97103) v2cuwmbB571
Csa7G290580Wax gourdcuwgoB707
Csa7G290580Cucumber (Gy14) v1cgycuB076
Csa7G290580Cucurbita maxima (Rimu)cmacuB039
Csa7G290580Cucurbita maxima (Rimu)cmacuB489
Csa7G290580Cucurbita maxima (Rimu)cmacuB500