Csa7G290520 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G290520
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 10117376 .. 10117988 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGTTGAAGAACTGGTTGAAGGTCATGATGGATATTGCTTTGAAATATTGAGGGTGAAGAAATGGAATTGTGAGAATTTGAGATTGAAGAAGCTGAAATTTGGGTCTGTGATTATTATGATTGTGAAGCTGTGAAGGGTGTCAGACTATGAGTATTTTGTGGGTATTCTGACAATGAAGGGGGTGTGGTTATATATTAAATGGGGTGGAGATGGGGTCCGGGAATATAATCCCTATCCCTGTCCTCATCTAGTCAACATGGAGAAATTTATCCCCATTCCCTCCCTTGGTTGGGGATTCCTGCCCTATTCAAGTTGGGTCCTCACGAGGTCCCAGTGGACATATGTATCCACATCATGTGCACAAACATTGCACAACTGGTGACCCACAGGTGCATTGATCTGTTGGCCATGTTGATATTGTGTGTGCACAAACATGAGCTACTAGAATTTAGGTGTGGACAGTTGTGCGGGAATCACTCTAGTTGTATATGGTGACCTCTTAGGTGGTTCTTGGGATTTTTGCTCGCAAACACTTGCACACAAATGGTTGGCAATATGGGCGTGCACGCACAACCATATTCACTGGTCCCCTTTGGCTTCTCCTTTGA

mRNA sequence

ATGAATGTTGAAGAACTGGTTGAAGGTCATGATGGATATTGCTTTGAAATATTGAGGGTGAAGAAATGGAATTGTGAGAATTTGAGATTGAAGAAGCTGAAATTTGGGTCTTCAACATGGAGAAATTTATCCCCATTCCCTCCCTTGGTTGGGGATTCCTGCCCTATTCAAGTTGGGTCCTCACGAGGTCCCAGTGGACATATGTATCCACATCATGTGCACAAACATTGCACAACTGGTGACCCACAGGTGGTTCTTGGGATTTTTGCTCGCAAACACTTGCACACAAATGGTTGGCAATATGGGCGTGCACGCACAACCATATTCACTGGTCCCCTTTGGCTTCTCCTTTGA

Coding sequence (CDS)

ATGAATGTTGAAGAACTGGTTGAAGGTCATGATGGATATTGCTTTGAAATATTGAGGGTGAAGAAATGGAATTGTGAGAATTTGAGATTGAAGAAGCTGAAATTTGGGTCTTCAACATGGAGAAATTTATCCCCATTCCCTCCCTTGGTTGGGGATTCCTGCCCTATTCAAGTTGGGTCCTCACGAGGTCCCAGTGGACATATGTATCCACATCATGTGCACAAACATTGCACAACTGGTGACCCACAGGTGGTTCTTGGGATTTTTGCTCGCAAACACTTGCACACAAATGGTTGGCAATATGGGCGTGCACGCACAACCATATTCACTGGTCCCCTTTGGCTTCTCCTTTGA

Protein sequence

MNVEELVEGHDGYCFEILRVKKWNCENLRLKKLKFGSSTWRNLSPFPPLVGDSCPIQVGSSRGPSGHMYPHHVHKHCTTGDPQVVLGIFARKHLHTNGWQYGRARTTIFTGPLWLLL*
Homology
[Close]
BLAST of Csa7G290520 vs. TrEMBL
Match: A0A0A0K689_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290520 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.8e-66
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1 

Query: 1   MNVEELVEGHDGYCFEILRVKKWNCENLRLKKLKFGSSTWRNLSPFPPLVGDSCPIQVGS 60
           MNVEELVEGHDGYCFEILRVKKWNCENLRLKKLKFGSSTWRNLSPFPPLVGDSCPIQVGS
Sbjct: 1   MNVEELVEGHDGYCFEILRVKKWNCENLRLKKLKFGSSTWRNLSPFPPLVGDSCPIQVGS 60

Query: 61  SRGPSGHMYPHHVHKHCTTGDPQVVLGIFARKHLHTNGWQYGRARTTIFTGPLWLLL 118
           SRGPSGHMYPHHVHKHCTTGDPQVVLGIFARKHLHTNGWQYGRARTTIFTGPLWLLL
Sbjct: 61  SRGPSGHMYPHHVHKHCTTGDPQVVLGIFARKHLHTNGWQYGRARTTIFTGPLWLLL 117

[Close]
BLAST of Csa7G290520 vs. NCBI nr
Match: gi|700189196|gb|KGN44429.1| (hypothetical protein Csa_7G290520 [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 2.6e-66
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1 

Query: 1   MNVEELVEGHDGYCFEILRVKKWNCENLRLKKLKFGSSTWRNLSPFPPLVGDSCPIQVGS 60
           MNVEELVEGHDGYCFEILRVKKWNCENLRLKKLKFGSSTWRNLSPFPPLVGDSCPIQVGS
Sbjct: 1   MNVEELVEGHDGYCFEILRVKKWNCENLRLKKLKFGSSTWRNLSPFPPLVGDSCPIQVGS 60

Query: 61  SRGPSGHMYPHHVHKHCTTGDPQVVLGIFARKHLHTNGWQYGRARTTIFTGPLWLLL 118
           SRGPSGHMYPHHVHKHCTTGDPQVVLGIFARKHLHTNGWQYGRARTTIFTGPLWLLL
Sbjct: 61  SRGPSGHMYPHHVHKHCTTGDPQVVLGIFARKHLHTNGWQYGRARTTIFTGPLWLLL 117

The following BLAST results are available for this feature:
BLAST of Csa7G290520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K689_CUCSA1.8e-66100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G290520 PE=4 SV=1[more]
BLAST of Csa7G290520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189196|gb|KGN44429.1|2.6e-66100.00hypothetical protein Csa_7G290520 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006470 protein dephosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0004725 protein tyrosine phosphatase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU138640cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G290520.1Csa7G290520.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU138640CU138640transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G290520Silver-seed gourdcarcuB0006
Csa7G290520Watermelon (97103) v2cuwmbB571
Csa7G290520Wax gourdcuwgoB707
Csa7G290520Cucumber (Gy14) v1cgycuB076
Csa7G290520Cucurbita maxima (Rimu)cmacuB039
Csa7G290520Cucurbita maxima (Rimu)cmacuB489
Csa7G290520Cucurbita maxima (Rimu)cmacuB500
Csa7G290520Cucurbita moschata (Rifu)cmocuB029
Csa7G290520Cucurbita moschata (Rifu)cmocuB032
Csa7G290520Cucurbita moschata (Rifu)cmocuB478
Csa7G290520Melon (DHL92) v3.5.1cumeB542
Csa7G290520Watermelon (Charleston Gray)cuwcgB525
Csa7G290520Watermelon (97103) v1cuwmB567
Csa7G290520Cucurbita pepo (Zucchini)cpecuB592
Csa7G290520Cucurbita pepo (Zucchini)cpecuB801
Csa7G290520Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G290520Cucumber (Gy14) v2cgybcuB323
Csa7G290520Melon (DHL92) v3.6.1cumedB503