Csa7G272140 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G272140
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 9657088 .. 9657566 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAAGGCCACTGAAAGAGAAAGAGTTGCAACCACTTACCCTATTTTAGCGACTTCTGTAGATCGAGTTATTCAAACCTCTTCTGAAATCTTGTAAACAAAGAGATCAATCAAGAATCCAAAATAGTTATAAACACACACCATCGTAAAGAGAGAGAAATTCCCTTATTATCATAATCCTTTTTTCGTGGTGGATCCTCTCTCAAGAATATCCCTGTCTTATGGCACATCTCCTTTCCAACTAAAGAAAGTCAAAGAAGAGCAGTAGCACCTTCTCAGGGATCTCAATTCTGGAAAAGTAAGAGAAACCCTATGCAAAATCAACCACAGCAGCAAAAGAAAATCCTTCAACAGCAAGGTGAAAAGACTATTGCATTCTTCATTGATTTTCTTAAGGGGCTAGTTAAGGGGTCTCCTCCTTTAACCTCTCATTCTCAAACTCCGCCTCTCTTATGCTTTGTGATTGATCTGAGATGA

mRNA sequence

ATGTCTAAGGCCACTGAAAGAGAAAGAGTTGCAACCACTTACCCTATTTTAGCGACTTCTAATATCCCTGTCTTATGGCACATCTCCTTTCCAACTAAAGAAAGTCAAAGAAGAGCAGTAGCACCTTCTCAGGGATCTCAATTCTGGAAAAGTAAGAGAAACCCTATGCAAAATCAACCACAGCAGCAAAAGAAAATCCTTCAACAGCAAGGTGAAAAGACTATTGCATTCTTCATTGATTTTCTTAAGGGGCTAGTTAAGGGGTCTCCTCCTTTAACCTCTCATTCTCAAACTCCGCCTCTCTTATGCTTTGTGATTGATCTGAGATGA

Coding sequence (CDS)

ATGTCTAAGGCCACTGAAAGAGAAAGAGTTGCAACCACTTACCCTATTTTAGCGACTTCTAATATCCCTGTCTTATGGCACATCTCCTTTCCAACTAAAGAAAGTCAAAGAAGAGCAGTAGCACCTTCTCAGGGATCTCAATTCTGGAAAAGTAAGAGAAACCCTATGCAAAATCAACCACAGCAGCAAAAGAAAATCCTTCAACAGCAAGGTGAAAAGACTATTGCATTCTTCATTGATTTTCTTAAGGGGCTAGTTAAGGGGTCTCCTCCTTTAACCTCTCATTCTCAAACTCCGCCTCTCTTATGCTTTGTGATTGATCTGAGATGA

Protein sequence

MSKATERERVATTYPILATSNIPVLWHISFPTKESQRRAVAPSQGSQFWKSKRNPMQNQPQQQKKILQQQGEKTIAFFIDFLKGLVKGSPPLTSHSQTPPLLCFVIDLR*
Homology
[Close]
BLAST of Csa7G272140 vs. TrEMBL
Match: A0A0A0K7R2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272140 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.8e-55
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1 

Query: 1   MSKATERERVATTYPILATSNIPVLWHISFPTKESQRRAVAPSQGSQFWKSKRNPMQNQP 60
           MSKATERERVATTYPILATSNIPVLWHISFPTKESQRRAVAPSQGSQFWKSKRNPMQNQP
Sbjct: 1   MSKATERERVATTYPILATSNIPVLWHISFPTKESQRRAVAPSQGSQFWKSKRNPMQNQP 60

Query: 61  QQQKKILQQQGEKTIAFFIDFLKGLVKGSPPLTSHSQTPPLLCFVIDLR 110
           QQQKKILQQQGEKTIAFFIDFLKGLVKGSPPLTSHSQTPPLLCFVIDLR
Sbjct: 61  QQQKKILQQQGEKTIAFFIDFLKGLVKGSPPLTSHSQTPPLLCFVIDLR 109

[Close]
BLAST of Csa7G272140 vs. NCBI nr
Match: gi|700189139|gb|KGN44372.1| (hypothetical protein Csa_7G272140 [Cucumis sativus])

HSP 1 Score: 223.0 bits (567), Expect = 2.5e-55
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1 

Query: 1   MSKATERERVATTYPILATSNIPVLWHISFPTKESQRRAVAPSQGSQFWKSKRNPMQNQP 60
           MSKATERERVATTYPILATSNIPVLWHISFPTKESQRRAVAPSQGSQFWKSKRNPMQNQP
Sbjct: 1   MSKATERERVATTYPILATSNIPVLWHISFPTKESQRRAVAPSQGSQFWKSKRNPMQNQP 60

Query: 61  QQQKKILQQQGEKTIAFFIDFLKGLVKGSPPLTSHSQTPPLLCFVIDLR 110
           QQQKKILQQQGEKTIAFFIDFLKGLVKGSPPLTSHSQTPPLLCFVIDLR
Sbjct: 61  QQQKKILQQQGEKTIAFFIDFLKGLVKGSPPLTSHSQTPPLLCFVIDLR 109

The following BLAST results are available for this feature:
BLAST of Csa7G272140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7R2_CUCSA1.8e-55100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272140 PE=4 SV=1[more]
BLAST of Csa7G272140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189139|gb|KGN44372.1|2.5e-55100.00hypothetical protein Csa_7G272140 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU156434cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G272140.1Csa7G272140.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU156434CU156434transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G272140Cucumber (Gy14) v1cgycuB348
Csa7G272140Cucurbita maxima (Rimu)cmacuB046
Csa7G272140Cucurbita maxima (Rimu)cmacuB495
Csa7G272140Cucurbita moschata (Rifu)cmocuB036
Csa7G272140Cucurbita moschata (Rifu)cmocuB484
Csa7G272140Melon (DHL92) v3.5.1cumeB524
Csa7G272140Watermelon (97103) v1cuwmB565
Csa7G272140Cucurbita pepo (Zucchini)cpecuB471
Csa7G272140Bottle gourd (USVL1VR-Ls)culsiB514
Csa7G272140Cucumber (Gy14) v2cgybcuB323
Csa7G272140Melon (DHL92) v3.6.1cumedB504
Csa7G272140Watermelon (97103) v2cuwmbB568
Csa7G272140Wax gourdcuwgoB703