Csa7G270580 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G270580
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionDiacylglycerol kinase family protein; contains IPR016064 (ATP-NAD kinase-like domain)
LocationChr7 : 9605526 .. 9606162 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGAAACTCTAGAATTTTTAATTTATTTTATGGAATAATTGTGGTGTGTTCCTTTGATAGAACCGATCCTATCAGTCTCAAGGTAGTTTCAAACTGTAGACCATTTTGGAGGGGGCGATGACTGCATTTTTACCATCTTTATTTAATTTCATCCATGTAGAATGCCATAACTCATAGGTTGATTACGCTGAATGGGAGCTGTATCCACAAGTAACTGCTCTATGCATTGGAAATGCTAAATACTTTGGCGGTGGTATGAAAATTGTGCCAAATGCCGATCCTTCCAACAGGAGTCTAGAGGTATAATTCGTTTCTGTGGGATTTTATTTGATCACTTTTTCCTTCCTTGTCTTCTTAACTATGTGATGCTTTTCTTTGCAGGTAGTAATTCTTCAGGATTTCAAGTGGTATGACTTTATTCTGAATTTACACAAAATATACAATGGGACATATTTGACGGTGAAAAACGTAACATCAAGAAGGTTAGTCATCTCTTTAAAAATTATAATGTGCCTAGATTTTCCATTTTGTATTTCAATTTTCTCTCTCCAACTGTCAGTTTTATGTTGGAGACTTGTGGAAGCAGAGGTGAAGAAACTATAATTGAACTGGATTTGCATGGAGCATTGTGA

mRNA sequence

ATGGAAAGAAACTCTAGAATTTTTAATTTATTTTATGGAATAATTGTGGTGTGTTCCTTTGATAGAACCGATCCTATCAGTCTCAAGGTTGATTACGCTGAATGGGAGCTGTATCCACAAGTAACTGCTCTATGCATTGGAAATGCTAAATACTTTGGCGGTGGTATGAAAATTGTGCCAAATGCCGATCCTTCCAACAGGAGTCTAGAGGTAGTAATTCTTCAGGATTTCAAGTGGTATGACTTTATTCTGAATTTACACAAAATATACAATGGGACATATTTGACGGTGAAAAACGTAACATCAAGAAGTTTTATGTTGGAGACTTGTGGAAGCAGAGGTGAAGAAACTATAATTGAACTGGATTTGCATGGAGCATTGTGA

Coding sequence (CDS)

ATGGAAAGAAACTCTAGAATTTTTAATTTATTTTATGGAATAATTGTGGTGTGTTCCTTTGATAGAACCGATCCTATCAGTCTCAAGGTTGATTACGCTGAATGGGAGCTGTATCCACAAGTAACTGCTCTATGCATTGGAAATGCTAAATACTTTGGCGGTGGTATGAAAATTGTGCCAAATGCCGATCCTTCCAACAGGAGTCTAGAGGTAGTAATTCTTCAGGATTTCAAGTGGTATGACTTTATTCTGAATTTACACAAAATATACAATGGGACATATTTGACGGTGAAAAACGTAACATCAAGAAGTTTTATGTTGGAGACTTGTGGAAGCAGAGGTGAAGAAACTATAATTGAACTGGATTTGCATGGAGCATTGTGA

Protein sequence

MERNSRIFNLFYGIIVVCSFDRTDPISLKVDYAEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRSFMLETCGSRGEETIIELDLHGAL*
Homology
[Close]
BLAST of Csa7G270580 vs. Swiss-Prot
Match: LCKB2_ARATH (Sphingoid long-chain bases kinase 2, mitochondrial OS=Arabidopsis thaliana GN=LCKB2 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.3e-30
Identity = 62/98 (63.27%), Postives = 75/98 (76.53%), Query Frame = 1 

Query: 9   NLFYGIIVVCSF--DRTDPISLKVDYAEWELYPQVTALCIGNAKYFGGGMKIVPNADPSN 68
           NL Y I  + +F       + ++V+  EWE+YPQVTALC+GNAKYFGGGMKI PNA P N
Sbjct: 225 NLCYVIGALQAFMGHHNQDMRIRVNGGEWEIYPQVTALCVGNAKYFGGGMKITPNAIPGN 284

Query: 69  RSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRS 105
            +LEVV+LQ+FKWYDF+L LHK+YNGT+L+V NVTSRS
Sbjct: 285 GNLEVVVLQNFKWYDFVLKLHKLYNGTHLSVNNVTSRS 322

[Close]
BLAST of Csa7G270580 vs. TrEMBL
Match: A0A0A0K611_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G270580 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.4e-67
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1 

Query: 1   MERNSRIFNLFYGIIVVCSFDRTDPISLKVDYAEWELYPQVTALCIGNAKYFGGGMKIVP 60
           MERNSRIFNLFYGIIVVCSFDRTDPISLKVDYAEWELYPQVTALCIGNAKYFGGGMKIVP
Sbjct: 1   MERNSRIFNLFYGIIVVCSFDRTDPISLKVDYAEWELYPQVTALCIGNAKYFGGGMKIVP 60

Query: 61  NADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRSFMLETCGSRGEETIIE 120
           NADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRSFMLETCGSRGEETIIE
Sbjct: 61  NADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRSFMLETCGSRGEETIIE 120

Query: 121 LDLHGAL 128
           LDLHGAL
Sbjct: 121 LDLHGAL 127

[Close]
BLAST of Csa7G270580 vs. TrEMBL
Match: A0A0A0L9B2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G211980 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.1e-36
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 30  VDYAEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHKI 89
           VDYAEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHKI
Sbjct: 184 VDYAEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHKI 243

Query: 90  YNGTYLTVKNVTSRS 105
           YNGTYLTVKNVTSRS
Sbjct: 244 YNGTYLTVKNVTSRS 258

[Close]
BLAST of Csa7G270580 vs. TrEMBL
Match: A0A0A0K3Y3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G280850 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.4e-35
Identity = 74/76 (97.37%), Postives = 74/76 (97.37%), Query Frame = 1 

Query: 29  KVDYAEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHK 88
           KVD  EWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHK
Sbjct: 124 KVDDGEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHK 183

Query: 89  IYNGTYLTVKNVTSRS 105
           IYNGTYLTVKNVTSRS
Sbjct: 184 IYNGTYLTVKNVTSRS 199

[Close]
BLAST of Csa7G270580 vs. TrEMBL
Match: A0A0A0KD28_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006770 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-34
Identity = 78/104 (75.00%), Postives = 83/104 (79.81%), Query Frame = 1 

Query: 3   RNSRIFNLFYGIIVVCSF--DRTDPISLKVDYAEWELYPQVTALCIGNAKYFGGGMKIVP 62
           R  +  NL Y I  +  F   +     +KVD  EWELYPQVTALCIGNAKYFGGGMKIVP
Sbjct: 60  RYKKFGNLCYVIGALQGFMGHQNRDFRIKVDDGEWELYPQVTALCIGNAKYFGGGMKIVP 119

Query: 63  NADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRS 105
           N DPSNRSLEVVILQDFKWYDFILNLHKIYNGT+LTVKNVTSRS
Sbjct: 120 NVDPSNRSLEVVILQDFKWYDFILNLHKIYNGTHLTVKNVTSRS 163

[Close]
BLAST of Csa7G270580 vs. TrEMBL
Match: D7UCH8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g01770 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.8e-30
Identity = 68/104 (65.38%), Postives = 81/104 (77.88%), Query Frame = 1 

Query: 3   RNSRIFNLFYGIIVVCSF--DRTDPISLKVDYAEWELYPQVTALCIGNAKYFGGGMKIVP 62
           R  R  NL Y I  + +F   +   + +K+D  EWE+YPQVTALCIGNAK+FGGGMKI P
Sbjct: 200 RYKRFGNLCYVIGALQAFIGHQNQDLRIKIDDGEWEIYPQVTALCIGNAKFFGGGMKITP 259

Query: 63  NADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRS 105
           NADP + S EVVILQDFKWYDFILNLHK+Y GT+L+VKNV+SRS
Sbjct: 260 NADPRSGSFEVVILQDFKWYDFILNLHKLYKGTHLSVKNVSSRS 303

[Close]
BLAST of Csa7G270580 vs. TAIR10
Match: AT2G46090.1 (AT2G46090.1 Diacylglycerol kinase family protein)

HSP 1 Score: 132.1 bits (331), Expect = 2.4e-31
Identity = 62/98 (63.27%), Postives = 75/98 (76.53%), Query Frame = 1 

Query: 9   NLFYGIIVVCSF--DRTDPISLKVDYAEWELYPQVTALCIGNAKYFGGGMKIVPNADPSN 68
           NL Y I  + +F       + ++V+  EWE+YPQVTALC+GNAKYFGGGMKI PNA P N
Sbjct: 225 NLCYVIGALQAFMGHHNQDMRIRVNGGEWEIYPQVTALCVGNAKYFGGGMKITPNAIPGN 284

Query: 69  RSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRS 105
            +LEVV+LQ+FKWYDF+L LHK+YNGT+L+V NVTSRS
Sbjct: 285 GNLEVVVLQNFKWYDFVLKLHKLYNGTHLSVNNVTSRS 322

[Close]
BLAST of Csa7G270580 vs. NCBI nr
Match: gi|700189131|gb|KGN44364.1| (hypothetical protein Csa_7G270580 [Cucumis sativus])

HSP 1 Score: 263.5 bits (672), Expect = 2.0e-67
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1 

Query: 1   MERNSRIFNLFYGIIVVCSFDRTDPISLKVDYAEWELYPQVTALCIGNAKYFGGGMKIVP 60
           MERNSRIFNLFYGIIVVCSFDRTDPISLKVDYAEWELYPQVTALCIGNAKYFGGGMKIVP
Sbjct: 1   MERNSRIFNLFYGIIVVCSFDRTDPISLKVDYAEWELYPQVTALCIGNAKYFGGGMKIVP 60

Query: 61  NADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRSFMLETCGSRGEETIIE 120
           NADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRSFMLETCGSRGEETIIE
Sbjct: 61  NADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRSFMLETCGSRGEETIIE 120

Query: 121 LDLHGAL 128
           LDLHGAL
Sbjct: 121 LDLHGAL 127

[Close]
BLAST of Csa7G270580 vs. NCBI nr
Match: gi|778688574|ref|XP_011652782.1| (PREDICTED: uncharacterized protein LOC105435092 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 3.1e-36
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 30  VDYAEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHKI 89
           VDYAEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHKI
Sbjct: 543 VDYAEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHKI 602

Query: 90  YNGTYLTVKNVTSRS 105
           YNGTYLTVKNVTSRS
Sbjct: 603 YNGTYLTVKNVTSRS 617

[Close]
BLAST of Csa7G270580 vs. NCBI nr
Match: gi|700202421|gb|KGN57554.1| (hypothetical protein Csa_3G211980 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 3.1e-36
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 30  VDYAEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHKI 89
           VDYAEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHKI
Sbjct: 184 VDYAEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHKI 243

Query: 90  YNGTYLTVKNVTSRS 105
           YNGTYLTVKNVTSRS
Sbjct: 244 YNGTYLTVKNVTSRS 258

[Close]
BLAST of Csa7G270580 vs. NCBI nr
Match: gi|778730292|ref|XP_011659752.1| (PREDICTED: sphingoid long-chain bases kinase 2, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 156.4 bits (394), Expect = 3.4e-35
Identity = 74/76 (97.37%), Postives = 74/76 (97.37%), Query Frame = 1 

Query: 29  KVDYAEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHK 88
           KVD  EWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHK
Sbjct: 125 KVDDGEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHK 184

Query: 89  IYNGTYLTVKNVTSRS 105
           IYNGTYLTVKNVTSRS
Sbjct: 185 IYNGTYLTVKNVTSRS 200

[Close]
BLAST of Csa7G270580 vs. NCBI nr
Match: gi|700189172|gb|KGN44405.1| (hypothetical protein Csa_7G280850 [Cucumis sativus])

HSP 1 Score: 156.4 bits (394), Expect = 3.4e-35
Identity = 74/76 (97.37%), Postives = 74/76 (97.37%), Query Frame = 1 

Query: 29  KVDYAEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHK 88
           KVD  EWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHK
Sbjct: 124 KVDDGEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHK 183

Query: 89  IYNGTYLTVKNVTSRS 105
           IYNGTYLTVKNVTSRS
Sbjct: 184 IYNGTYLTVKNVTSRS 199

The following BLAST results are available for this feature:
BLAST of Csa7G270580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LCKB2_ARATH4.3e-3063.27Sphingoid long-chain bases kinase 2, mitochondrial OS=Arabidopsis thaliana GN=LC... [more]
BLAST of Csa7G270580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K611_CUCSA1.4e-67100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G270580 PE=4 SV=1[more]
A0A0A0L9B2_CUCSA2.1e-36100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G211980 PE=4 SV=1[more]
A0A0A0K3Y3_CUCSA2.4e-3597.37Uncharacterized protein OS=Cucumis sativus GN=Csa_7G280850 PE=4 SV=1[more]
A0A0A0KD28_CUCSA1.2e-3475.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006770 PE=4 SV=1[more]
D7UCH8_VITVI1.8e-3065.38Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g01770 PE=4 SV=... [more]
BLAST of Csa7G270580 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G46090.12.4e-3163.27 Diacylglycerol kinase family protein[more]
BLAST of Csa7G270580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189131|gb|KGN44364.1|2.0e-67100.00hypothetical protein Csa_7G270580 [Cucumis sativus][more]
gi|778688574|ref|XP_011652782.1|3.1e-36100.00PREDICTED: uncharacterized protein LOC105435092 [Cucumis sativus][more]
gi|700202421|gb|KGN57554.1|3.1e-36100.00hypothetical protein Csa_3G211980 [Cucumis sativus][more]
gi|778730292|ref|XP_011659752.1|3.4e-3597.37PREDICTED: sphingoid long-chain bases kinase 2, mitochondrial-like [Cucumis sati... [more]
gi|700189172|gb|KGN44405.1|3.4e-3597.37hypothetical protein Csa_7G280850 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016064NAD/diacylglycerol_kinase_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0016301 kinase activity
molecular_function GO:0003951 NAD+ kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G270580.1Csa7G270580.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016064NAD kinase/diacylglycerol kinase-like domainunknownSSF111331NAD kinase/diacylglycerol kinase-likecoord: 10..103
score: 2.16
NoneNo IPR availablePANTHERPTHR12358SPHINGOSINE KINASEcoord: 31..104
score: 3.7
NoneNo IPR availablePANTHERPTHR12358:SF43SPHINGOID LONG-CHAIN BASES KINASE 2, MITOCHONDRIALcoord: 31..104
score: 3.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G270580CsGy7G010950Cucumber (Gy14) v2cgybcuB323
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G270580Cucumber (Gy14) v1cgycuB348
Csa7G270580Cucurbita maxima (Rimu)cmacuB495
Csa7G270580Cucurbita moschata (Rifu)cmocuB484