Csa7G234660 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G234660
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Suppressor of silencing; contains IPR005380 (XS domain)
Location	Chr7 : 8313454 .. 8316861 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTTTGTGGGAAGTAGTGGAATTAATGCATGCTTTCTGTGCTTGTTGATACTTTTTGCAATTCTGGAGTCTTTGTTTCCACCTACACCCTAACATTTTGAGTGGTGCTTACCAACTTATTCCCATTTTGGTTCAAATTTGTAGGCTTGCATTATAGTTTGAACCTATTAAAAAATTCATACTTTGGGCCCCTAAAGAATGTTGTCCCCTCCTTTATATGCTTACTTTCAGGTCCTCTAGAGATTTTCCAGATATGCATGGCCTTATTATGCACACATACAACTCTGAGAGTGCTGACTCGCAAGTGGATCATTTGGGTTTACATAAAGCTCTCTGTGTATTAATGGGGTGGAACTACTCAAAGCCTCCTGATAATTCAAGAGGATACCGGTTTCTATCTGCTGACGAAGCAGCAGCTAACCAGGAGGATCTGATTATGTGGCCTCCTCTAGTTATCATCCATAACACTATTACTGGAAAGAGTAAAGATGGACGAATGGAGGGTTTGGGAAACAAAGCAATGGATAGTAAGATTAGAGGTATAATACACCTTCTTAAATCTTTTCGTTCTTCATTTCTGCTTGAATCAATTTATCTCATGTTTGGTAGAATAAGGTCTATCAACTAGGACACACTATGTCCATCTGTTTTAGGCAACAGATTTAGAATGTAGAGTACTTGATTGAATTTTTTAGTTGCTGATAAGAAACGTGGTTTTTTTGTATCTTACTTGTTTAGCTAATAAACCTAAAGTTGTATCTGAATGTTCCATGGATGAGTTGATGCCACACGTGGAACACTATGCTCATTCTGATATTGTCTTGTTCTGGCGTTAGTGCATCTGTTTCAAAGCCAATTGGAAGGAATTTTTTTAATGCTTTTGCTCAAGGAGAATATCTTATCCATAAAATGTGAATGAAGCTATTTCTCCCCCTTTCGTAGTCTTCTTTCTGGACCAAATCTCTGCTTCTTATCCGTAGAATGTGAATTGAAGCTGTTTCTCTTTTCCAATGTTCAAACGTTCACACATTGTAGGGAGGAAGGGCCACACTGTACATTGTACAAGTCCTTTTTTTCCTTAAAAAACATCTTTTGATAATTTACTTATCAGGTCTCTTCTCTCCTTATCTCTCTCAAGTCTGTCAGAGTCAGATGATTCATCTCTTATGCACAGTTTAGAAATTAGAGCAACTTAATTTCTTATTGATACAATTGCTGAAGAACTATGGTTATATTTAGTCTTCATAATATACTTCTTTGTTGAAGTACTTCTGTTATGTATTAGTATGGTTGCTGATCGTTATTAGGTTATATTTACCTGCTTTATACTGTAATTATAATTAATTTACCTAAAGTTTTTATCTGAATCCTCCATGGATATGTTGATGTCACATTGGTGTCTTTTAGGACTTTTCTGTTATTGTCCTGTTTTTGGCTTGGAAAGGCTGTTTTTCAGCTCATTTGAAGGGATTAATCCCTTTTCTAATTAAAATCCTTAGATCACTGTAGATTTCTTTGGAGTCCTTGATTTTTTTAAAAATTATCCTGCAATCTTGGTCTGCTGACATAAGTGAGATATGAATAGGTTTGCAGTCTGTAGAGAGCTTAATCTGAGAAATGTGCATATTACTATTGGCATGTTCTTTATGCACTAGATATGATTTTAAGCATCTCTCTGCATCTCAAATGTCGAGTTGAACATAGTTTTTATTTCTTTGTTTTAAACTATACCTTTCTTATCAATTAGGTTGTCTGATCTTATTATTATATTGTTTAGGCTTAAGTTTCATATGCTTTTTTTAATATAAGAAACGAAGGAGTCTTAACAGCAACCAAAGTTGATACAGTCTATGAGCAGGGGGAAGAGAAACCTATCTCTCAAAGGAAACTAATTACAAATTTTTTAATGATCTTAAGAGAAGTTAGCGGCAGGTTACATGAGATCTTTTGGTGATAAATTGATTAATTTCATTGCATATTATATATATATTCCTGCATTGTTTAAGACGCGTGAACTGGAAGAGGTTGGGGTTGTGATTTTGATTGTTTAATCCTAGACTGTACCTTCATCAACCTCTTATTTCGGCAGTATATTTTTGGATTGTATTCTTCATCTGTTTTAGTGTGGGAGACAAAGAGAGGTAGTGATAGGCTTTCCAATTTGATACTTTGCAATCTCAGATGGAAGACTTAGATTCCGATAAATTGGAGGCATTCTGATATTAAGTTATGCTTAACATCAGGGCAACTTTTTAATTTGAAACATTATTTAGTTTGTCTTCCTTGGTATTATAACAGTGTGCATTTAACCGTTCATTGTTAGTATTTATCATGCTAGTTTCTAGTGTGATGCTTTGTTAATTGGTAGACGTGATAATAATTTGGCTCTGATCGTCTTTTCAATTTATTATCATATGTGATTTGGGTTTTCCCATATTCTCAAGCTTCCTGTACTGGGTACTCGGGGTGTTCTTCCGTGCCATATGCCTGTACTGGGTACTTGGGATTTTGTGCCCTAATTTTTGTTTTAAATAATCGTGCCATACACCACGTTAGATTTGTACATTCTGAATCTTTTAAGCTTTAGTAAACAGTGGTCTAAAAATGTTTATTTGGTTTCTACATAGCCACCTCTGTTCTTAGTTCATGGTTTTGCCTTCTGTAATCCAACGCTGGTTTGCTATCGATCTATTGGCATTTAGCTGTCATGATGAGTCATTTGGCCCTTTTTTTTCAGACCTCGGGTTTGGGGGTGGTAAGTCCAAGTCTTTGTATGGAAGGGATGGTCATTTGGGCACAACTTTGATCAAGTTCTCGGGTGATCAGTCTGGCCTCAATGAAGCCAAGAGGCTGGCTGAATTTTTTGAGAAGGACAATCATGGACGTTCGGTTTGGGCTCGTGTGCGACCTGCAGCATATAGCAGGGACGATGATAAAAATCCAAACCTTGTGATGGTGGATGAAAAATCTGGAGAGAAGAAAAGGATTTTTTATGGCTATCTTGCAACTGCAGCTGATATGGACAAGGTTGATTTTGATACAAGGAAGAAGGTAACCATAGAGAGCTGTAGGGATTTCAAATCATCCAGGTAGATTTTCTCGATAAATATTGTTCAGCATATTGTTCAGCGCTTCTTCAATTTGTGTCCTTGGTTGAACCGCAACACTCAGATCCACCTCATTTATTAGCTCGATAGTTCATGGATGGAGTCTACCAAACAGCTTATTGAATTTTGTCCTTTGTCAAAAGGTGGTGGTCGGTTATGTTTTGTCTACCAGGAATCTCCCTGGATTGTTGCGTAAATTTTAATTCTACTGTGGAATATATGTGTATGGTAGGATGTGGAACATGGATCTGGTTTTTGCAGTTTTAAATCCTAATGATTGAAAAAAGCTTGAATTATTAGT

mRNA sequence

ATGCTTACTTTCAGGTCCTCTAGAGATTTTCCAGATATGCATGGCCTTATTATGCACACATACAACTCTGAGAGTGCTGACTCGCAAGTGGATCATTTGGGTTTACATAAAGCTCTCTGTGTATTAATGGGGTGGAACTACTCAAAGCCTCCTGATAATTCAAGAGGATACCGGTTTCTATCTGCTGACGAAGCAGCAGCTAACCAGGAGGATCTGATTATGTGGCCTCCTCTAGTTATCATCCATAACACTATTACTGGAAAGAGTAAAGATGGACGAATGGAGGGTTTGGGAAACAAAGCAATGGATAGTAAGATTAGAGACCTCGGGTTTGGGGGTGGTAAGTCCAAGTCTTTGTATGGAAGGGATGGTCATTTGGGCACAACTTTGATCAAGTTCTCGGGTGATCAGTCTGGCCTCAATGAAGCCAAGAGGCTGGCTGAATTTTTTGAGAAGGACAATCATGGACGTTCGGTTTGGGCTCGTGTGCGACCTGCAGCATATAGCAGGGACGATGATAAAAATCCAAACCTTGTGATGGTGGATGAAAAATCTGGAGAGAAGAAAAGGATTTTTTATGGCTATCTTGCAACTGCAGCTGATATGGACAAGGTTGATTTTGATACAAGGAAGAAGGTAACCATAGAGAGCTGTAGGGATTTCAAATCATCCAGGTAG

Coding sequence (CDS)

ATGCTTACTTTCAGGTCCTCTAGAGATTTTCCAGATATGCATGGCCTTATTATGCACACATACAACTCTGAGAGTGCTGACTCGCAAGTGGATCATTTGGGTTTACATAAAGCTCTCTGTGTATTAATGGGGTGGAACTACTCAAAGCCTCCTGATAATTCAAGAGGATACCGGTTTCTATCTGCTGACGAAGCAGCAGCTAACCAGGAGGATCTGATTATGTGGCCTCCTCTAGTTATCATCCATAACACTATTACTGGAAAGAGTAAAGATGGACGAATGGAGGGTTTGGGAAACAAAGCAATGGATAGTAAGATTAGAGACCTCGGGTTTGGGGGTGGTAAGTCCAAGTCTTTGTATGGAAGGGATGGTCATTTGGGCACAACTTTGATCAAGTTCTCGGGTGATCAGTCTGGCCTCAATGAAGCCAAGAGGCTGGCTGAATTTTTTGAGAAGGACAATCATGGACGTTCGGTTTGGGCTCGTGTGCGACCTGCAGCATATAGCAGGGACGATGATAAAAATCCAAACCTTGTGATGGTGGATGAAAAATCTGGAGAGAAGAAAAGGATTTTTTATGGCTATCTTGCAACTGCAGCTGATATGGACAAGGTTGATTTTGATACAAGGAAGAAGGTAACCATAGAGAGCTGTAGGGATTTCAAATCATCCAGGTAG

Protein sequence

MLTFRSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFLSADEAAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLYGRDGHLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVMVDEKSGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR*

Homology

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BLAST of Csa7G234660 vs. TrEMBL
Match: A0A0A0K3G5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G234660 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 1.6e-127
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1


Query: 1   MLTFRSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFL 60
           MLTFRSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFL
Sbjct: 1   MLTFRSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFL 60

Query: 61  SADEAAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLY 120
           SADEAAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLY
Sbjct: 61  SADEAAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLY 120

Query: 121 GRDGHLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVM 180
           GRDGHLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVM
Sbjct: 121 GRDGHLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVM 180

Query: 181 VDEKSGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR 226
           VDEKSGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR
Sbjct: 181 VDEKSGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR 225

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BLAST of Csa7G234660 vs. TrEMBL
Match: A0A061EL16_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_020625 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 4.1e-99
Identity = 171/222 (77.03%), Postives = 197/222 (88.74%), Query Frame = 1


Query: 4   FRSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFLSAD 63
           FRSS+DFPDMHGLIMHTY S++AD +VDHLGLHKALCVLMGWNYSKPPDNS+ YRFL AD
Sbjct: 275 FRSSKDFPDMHGLIMHTYYSDNADLRVDHLGLHKALCVLMGWNYSKPPDNSKVYRFLPAD 334

Query: 64  EAAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLYGRD 123
           EAAANQEDLIMWPP+VI+HNTITGKSKDGRMEGLGNKAMDSK+RDLGFG GKSKS+YGR+
Sbjct: 335 EAAANQEDLIMWPPVVIVHNTITGKSKDGRMEGLGNKAMDSKLRDLGFGSGKSKSMYGRE 394

Query: 124 GHLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVMVDE 183
           GHLG T++KF+GDQSGL +A RLAE+FEK+N GR  W+ V+P    +DD+KNP+LV VDE
Sbjct: 395 GHLGITVVKFAGDQSGLKDAVRLAEYFEKENRGRKGWSHVQPLTLGKDDEKNPSLVKVDE 454

Query: 184 KSGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR 226
           ++GEKKRIFYGYL T AD+DKVDFD RK+V IES R+ K  R
Sbjct: 455 RTGEKKRIFYGYLGTVADLDKVDFDMRKRVVIESRREHKGPR 496

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BLAST of Csa7G234660 vs. TrEMBL
Match: F6HDQ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03460 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 2.7e-98
Identity = 174/222 (78.38%), Postives = 196/222 (88.29%), Query Frame = 1


Query: 5   RSSRDFPDMHGLIMHTYNSES--ADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFLSA 64
           RSS+DFPDMH L+MHTYNS S  A+  VDHLGLHKALCVL+GWNYS PPDNS+ Y+FLSA
Sbjct: 360 RSSKDFPDMHALVMHTYNSNSDNANLLVDHLGLHKALCVLLGWNYSMPPDNSKTYQFLSA 419

Query: 65  DEAAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLYGR 124
           DEAAANQ+DLIMWPP VIIHNT++GK KDGRMEGLGNKAMD+K+RDLGFGGGKSKSLYGR
Sbjct: 420 DEAAANQDDLIMWPPTVIIHNTVSGKGKDGRMEGLGNKAMDNKLRDLGFGGGKSKSLYGR 479

Query: 125 DGHLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVMVD 184
           DGH G TL+KFSGDQSGL EA RL+EFFEKDNHGR  WARV+P    RD + NPNLV VD
Sbjct: 480 DGHQGITLVKFSGDQSGLKEAVRLSEFFEKDNHGRKGWARVQPLLPGRDSENNPNLVKVD 539

Query: 185 EKSGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSS 225
           E++GEKKRIFYGYLATA+D+DKVDF+TRKKV IES R++K S
Sbjct: 540 ERTGEKKRIFYGYLATASDLDKVDFETRKKVLIESKREYKPS 581

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BLAST of Csa7G234660 vs. TrEMBL
Match: V4U1T9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005817mg PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.3e-97
Identity = 167/225 (74.22%), Postives = 198/225 (88.00%), Query Frame = 1


Query: 1   MLTFRSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFL 60
           M  +RSS+DF DMHGLIMHTYNS++AD +VDHLGLHKALCVLMGWNYSKPPDNS+ Y+FL
Sbjct: 1   MQNYRSSKDFSDMHGLIMHTYNSDNADLRVDHLGLHKALCVLMGWNYSKPPDNSKAYKFL 60

Query: 61  SADEAAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLY 120
             DEAAANQ+DLIMWPP+VIIHNT+TGK KDGRMEGLGNKAMD  IRDLGFG GKSKSLY
Sbjct: 61  PPDEAAANQDDLIMWPPVVIIHNTLTGKGKDGRMEGLGNKAMDKTIRDLGFGTGKSKSLY 120

Query: 121 GRDGHLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVM 180
           GR+GHLG TL+KF+GDQSGL +A RLAE+FEKD+ GR VWARV+P +  +DD+ NP+LV 
Sbjct: 121 GREGHLGITLVKFAGDQSGLKDAVRLAEYFEKDSRGRKVWARVQPLSLGKDDENNPSLVT 180

Query: 181 VDEKSGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR 226
           VD+++GEKKRI YGY+ TA+D+DKVDF+TRKK  IES R+ K+S+
Sbjct: 181 VDQRTGEKKRILYGYIGTASDLDKVDFETRKKAVIESRREIKASK 225

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BLAST of Csa7G234660 vs. TrEMBL
Match: A0A067GGL4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012147mg PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 3.8e-97
Identity = 167/221 (75.57%), Postives = 196/221 (88.69%), Query Frame = 1


Query: 5   RSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFLSADE 64
           RSS+DF DMHGLIMHTYNS++AD +VDHLGLHKALCVLMGWNYSKPPDNS+ Y+FL  DE
Sbjct: 250 RSSKDFSDMHGLIMHTYNSDNADLRVDHLGLHKALCVLMGWNYSKPPDNSKAYKFLPPDE 309

Query: 65  AAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLYGRDG 124
           AAANQ+DLIMWPP+VIIHNT+TGK KDGRMEGLGNKAMD  IRDLGFG GKSKSLYGR+G
Sbjct: 310 AAANQDDLIMWPPVVIIHNTLTGKGKDGRMEGLGNKAMDKTIRDLGFGTGKSKSLYGREG 369

Query: 125 HLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVMVDEK 184
           HLG TL+KF+GDQSGL +A RLAE+FEKD+ GR VWARV+P +  +DD+ NP+LV VD++
Sbjct: 370 HLGITLVKFAGDQSGLKDAVRLAEYFEKDSRGRKVWARVQPLSLGKDDENNPSLVTVDQR 429

Query: 185 SGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR 226
           +GEKKRI YGYL TA+D+DKVDF+TRKK  IES R+ K+S+
Sbjct: 430 TGEKKRILYGYLGTASDLDKVDFETRKKAVIESRREIKASK 470

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BLAST of Csa7G234660 vs. TAIR10
Match: AT3G22430.1 (AT3G22430.1 Domain of unknown function XS (InterPro:IPR005380))

HSP 1 Score: 307.8 bits (787), Expect = 5.7e-84
Identity = 144/221 (65.16%), Postives = 172/221 (77.83%), Query Frame = 1


Query: 5   RSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFLSADE 64
           RSS+D  D H L+MHTY S+ + S+V HLGLHKALCVLMGWN+SK PDNS+ Y+ L ADE
Sbjct: 290 RSSKDVQDTHSLVMHTYCSDDSSSRVHHLGLHKALCVLMGWNFSKAPDNSKAYQNLPADE 349

Query: 65  AAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLYGRDG 124
           AA NQ  LI+WPP VI+ NT TGK K+GRMEG GNK MD++IR+LG  GGKSKSLYGR+G
Sbjct: 350 AAINQAQLIIWPPHVIVQNTSTGKGKEGRMEGFGNKTMDNRIRELGLTGGKSKSLYGREG 409

Query: 125 HLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVMVDEK 184
           HLG TL KF+GD SGL +A R+AE+FEK N GR  W RV+P   S+DD+KNP LV VD +
Sbjct: 410 HLGITLFKFAGDDSGLRDAMRMAEYFEKINRGRKSWGRVQPLTPSKDDEKNPGLVEVDGR 469

Query: 185 SGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR 226
           +GEKKRIFYGYLAT  D+DKVD +T+KK TIES R+   ++
Sbjct: 470 TGEKKRIFYGYLATVTDLDKVDVETKKKTTIESLRELTRTK 510

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BLAST of Csa7G234660 vs. TAIR10
Match: AT5G23570.1 (AT5G23570.1 XS domain-containing protein / XS zinc finger domain-containing protein-related)

HSP 1 Score: 51.2 bits (121), Expect = 9.6e-07
Identity = 36/131 (27.48%), Postives = 57/131 (43.51%), Query Frame = 1


Query: 73  IMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLYGRDGHLGTTLIK 132
           I+WPP+VII NT   K  + +  G+GN+ +        +   +++  YG  GH G +++ 
Sbjct: 301 IVWPPMVIIMNTRLDKDDNDKWLGMGNQELLEYFDK--YEALRARHSYGPQGHRGMSVLM 360

Query: 133 FSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVMVDEKSGEKKRIF 192
           F    +G  EA+RL     +    R  W + R                    SG  +++ 
Sbjct: 361 FESSATGYLEAERLHRELAEMGLDRIAWGQKRSMF-----------------SGGVRQL- 411

Query: 193 YGYLATAADMD 204
           YG+LAT  D+D
Sbjct: 421 YGFLATKQDLD 411

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BLAST of Csa7G234660 vs. NCBI nr
Match: gi|700189012|gb|KGN44245.1| (hypothetical protein Csa_7G234660 [Cucumis sativus])

HSP 1 Score: 463.4 bits (1191), Expect = 2.3e-127
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1


Query: 1   MLTFRSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFL 60
           MLTFRSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFL
Sbjct: 1   MLTFRSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFL 60

Query: 61  SADEAAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLY 120
           SADEAAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLY
Sbjct: 61  SADEAAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLY 120

Query: 121 GRDGHLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVM 180
           GRDGHLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVM
Sbjct: 121 GRDGHLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVM 180

Query: 181 VDEKSGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR 226
           VDEKSGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR
Sbjct: 181 VDEKSGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR 225

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BLAST of Csa7G234660 vs. NCBI nr
Match: gi|449444110|ref|XP_004139818.1| (PREDICTED: uncharacterized protein LOC101210911 [Cucumis sativus])

HSP 1 Score: 455.7 bits (1171), Expect = 4.8e-125
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1


Query: 5   RSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFLSADE 64
           RSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFLSADE
Sbjct: 344 RSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFLSADE 403

Query: 65  AAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLYGRDG 124
           AAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLYGRDG
Sbjct: 404 AAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLYGRDG 463

Query: 125 HLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVMVDEK 184
           HLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVMVDEK
Sbjct: 464 HLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVMVDEK 523

Query: 185 SGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR 226
           SGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR
Sbjct: 524 SGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR 564

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BLAST of Csa7G234660 vs. NCBI nr
Match: gi|659092627|ref|XP_008447151.1| (PREDICTED: uncharacterized protein LOC103489668 [Cucumis melo])

HSP 1 Score: 451.8 bits (1161), Expect = 6.9e-124
Identity = 219/221 (99.10%), Postives = 219/221 (99.10%), Query Frame = 1


Query: 5   RSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFLSADE 64
           RSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFLSADE
Sbjct: 338 RSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFLSADE 397

Query: 65  AAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLYGRDG 124
           AAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLYGRDG
Sbjct: 398 AAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLYGRDG 457

Query: 125 HLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVMVDEK 184
           HLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRS WARVRPAAYSRDDDKNPNLV VDEK
Sbjct: 458 HLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSAWARVRPAAYSRDDDKNPNLVKVDEK 517

Query: 185 SGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR 226
           SGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR
Sbjct: 518 SGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR 558

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BLAST of Csa7G234660 vs. NCBI nr
Match: gi|590658116|ref|XP_007034759.1| (Uncharacterized protein TCM_020625 [Theobroma cacao])

HSP 1 Score: 369.0 bits (946), Expect = 5.9e-99
Identity = 171/222 (77.03%), Postives = 197/222 (88.74%), Query Frame = 1


Query: 4   FRSSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFLSAD 63
           FRSS+DFPDMHGLIMHTY S++AD +VDHLGLHKALCVLMGWNYSKPPDNS+ YRFL AD
Sbjct: 275 FRSSKDFPDMHGLIMHTYYSDNADLRVDHLGLHKALCVLMGWNYSKPPDNSKVYRFLPAD 334

Query: 64  EAAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLYGRD 123
           EAAANQEDLIMWPP+VI+HNTITGKSKDGRMEGLGNKAMDSK+RDLGFG GKSKS+YGR+
Sbjct: 335 EAAANQEDLIMWPPVVIVHNTITGKSKDGRMEGLGNKAMDSKLRDLGFGSGKSKSMYGRE 394

Query: 124 GHLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVMVDE 183
           GHLG T++KF+GDQSGL +A RLAE+FEK+N GR  W+ V+P    +DD+KNP+LV VDE
Sbjct: 395 GHLGITVVKFAGDQSGLKDAVRLAEYFEKENRGRKGWSHVQPLTLGKDDEKNPSLVKVDE 454

Query: 184 KSGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR 226
           ++GEKKRIFYGYL T AD+DKVDFD RK+V IES R+ K  R
Sbjct: 455 RTGEKKRIFYGYLGTVADLDKVDFDMRKRVVIESRREHKGPR 496

[Close]

BLAST of Csa7G234660 vs. NCBI nr
Match: gi|297737052|emb|CBI26253.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 366.3 bits (939), Expect = 3.8e-98
Identity = 174/222 (78.38%), Postives = 196/222 (88.29%), Query Frame = 1


Query: 5   RSSRDFPDMHGLIMHTYNSES--ADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFLSA 64
           RSS+DFPDMH L+MHTYNS S  A+  VDHLGLHKALCVL+GWNYS PPDNS+ Y+FLSA
Sbjct: 285 RSSKDFPDMHALVMHTYNSNSDNANLLVDHLGLHKALCVLLGWNYSMPPDNSKTYQFLSA 344

Query: 65  DEAAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRDLGFGGGKSKSLYGR 124
           DEAAANQ+DLIMWPP VIIHNT++GK KDGRMEGLGNKAMD+K+RDLGFGGGKSKSLYGR
Sbjct: 345 DEAAANQDDLIMWPPTVIIHNTVSGKGKDGRMEGLGNKAMDNKLRDLGFGGGKSKSLYGR 404

Query: 125 DGHLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSVWARVRPAAYSRDDDKNPNLVMVD 184
           DGH G TL+KFSGDQSGL EA RL+EFFEKDNHGR  WARV+P    RD + NPNLV VD
Sbjct: 405 DGHQGITLVKFSGDQSGLKEAVRLSEFFEKDNHGRKGWARVQPLLPGRDSENNPNLVKVD 464

Query: 185 EKSGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSS 225
           E++GEKKRIFYGYLATA+D+DKVDF+TRKKV IES R++K S
Sbjct: 465 ERTGEKKRIFYGYLATASDLDKVDFETRKKVLIESKREYKPS 506

The following BLAST results are available for this feature:

BLAST of Csa7G234660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3G5_CUCSA	1.6e-127	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G234660 PE=4 SV=1	[more]
A0A061EL16_THECC	4.1e-99	77.03	Uncharacterized protein OS=Theobroma cacao GN=TCM_020625 PE=4 SV=1	[more]
F6HDQ3_VITVI	2.7e-98	78.38	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03460 PE=4 SV=...	[more]
V4U1T9_9ROSI	1.3e-97	74.22	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005817mg PE=4 SV=1	[more]
A0A067GGL4_CITSI	3.8e-97	75.57	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012147mg PE=4 SV=1	[more]

BLAST of Csa7G234660 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22430.1	5.7e-84	65.16	Domain of unknown function XS (InterPro:IPR005380)	[more]
AT5G23570.1	9.6e-07	27.48	XS domain-containing protein / XS zinc finger domain-containing prot...	[more]

BLAST of Csa7G234660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700189012\|gb\|KGN44245.1\|	2.3e-127	100.00	hypothetical protein Csa_7G234660 [Cucumis sativus]	[more]
gi\|449444110\|ref\|XP_004139818.1\|	4.8e-125	100.00	PREDICTED: uncharacterized protein LOC101210911 [Cucumis sativus]	[more]
gi\|659092627\|ref\|XP_008447151.1\|	6.9e-124	99.10	PREDICTED: uncharacterized protein LOC103489668 [Cucumis melo]	[more]
gi\|590658116\|ref\|XP_007034759.1\|	5.9e-99	77.03	Uncharacterized protein TCM_020625 [Theobroma cacao]	[more]
gi\|297737052\|emb\|CBI26253.3\|	3.8e-98	78.38	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005380	XS_domain

Vocabulary: **Biological Process**
Term	Definition
GO:0031047	gene silencing by RNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031047	gene silencing by RNA
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU095883	cucumber EST collection version 3.0	transcribed_cluster
CU115416	cucumber EST collection version 3.0	transcribed_cluster
CU121996	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa7G234660.1	Csa7G234660.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU121996	CU121996	transcribed_cluster
CU095883	CU095883	transcribed_cluster
CU115416	CU115416	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005380	XS domain	PFAM	PF03468	XS	coord: 70..203 score: 1.2
None	No IPR available	PANTHER	PTHR21596	RIBONUCLEASE P SUBUNIT P38	coord: 5..221 score: 2.4E
None	No IPR available	PANTHER	PTHR21596:SF11	SUBFAMILY NOT NAMED	coord: 5..221 score: 2.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa7G234660	Cla009413	Watermelon (97103) v1	cuwmB613
Csa7G234660	MELO3C012650	Melon (DHL92) v3.5.1	cumeB533
Csa7G234660	ClCG06G006230	Watermelon (Charleston Gray)	cuwcgB560
Csa7G234660	Lsi09G013180	Bottle gourd (USVL1VR-Ls)	culsiB486
Csa7G234660	MELO3C012650.2	Melon (DHL92) v3.6.1	cumedB512
Csa7G234660	Cla97C06G115730	Watermelon (97103) v2	cuwmbB545
Csa7G234660	Bhi12G001520	Wax gourd	cuwgoB652
Csa7G234660	CSPI07G10560	Wild cucumber (PI 183967)	cpicuB354
Csa7G234660	Cucsa.239490	Cucumber (Gy14) v1	cgycuB341
Csa7G234660	CmaCh08G011410	Cucurbita maxima (Rimu)	cmacuB917
Csa7G234660	CmaCh17G002320	Cucurbita maxima (Rimu)	cmacuB386
Csa7G234660	CmoCh17G002200	Cucurbita moschata (Rifu)	cmocuB376
Csa7G234660	CmoCh08G011180	Cucurbita moschata (Rifu)	cmocuB903
Csa7G234660	Cp4.1LG17g01510	Cucurbita pepo (Zucchini)	cpecuB347
Csa7G234660	Cp4.1LG12g01950	Cucurbita pepo (Zucchini)	cpecuB159
Csa7G234660	CsGy7G009900	Cucumber (Gy14) v2	cgybcuB323
Csa7G234660	Carg05416	Silver-seed gourd	carcuB0082
Csa7G234660	Carg15904	Silver-seed gourd	carcuB0355

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa7G234660	Cucumber (Chinese Long) v2	cucuB175