Csa7G230940 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G230940
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionGlutaredoxin; contains IPR011905 (Glutaredoxin-like, plant II), IPR012336 (Thioredoxin-like fold)
LocationChr7 : 8094622 .. 8095290 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAGAAAATCTAAACATATAAAACCCTTCCGTAGATAGTAATATTGTTGGTTTGAGATATATATTCATCTCAACCCACCACCAAATAGTGTGAGAGACTTTCAAAGTGCAGTACACACTTTTGAAGGGCAATAAAGGGGGGAAAAAGGAGTTTTTTTTTTCTTAATATTTTAGAGTTAGTGAATGGAAAAGGTGAATAGATTAGCAGCTGAAAATGAAGTGCTAATAATAAGCAAGAGTTCTTGCTGCCTTTGTTATGCTGTGAGTGTTCTTCTAAGGGATCTTGGAGTTAGTCCCATGGTGTACGAGCTTGATCAAGACCCTGAAGGAAGAGACATGGAGAAGGCTCTTGTAAGGCTTCAAGGCTGCAACACGCCACCTGTTCCCGCTGTCTTCATTGCCGGAGACCTCGTCGGGTCAACCAATGAACTGATGTCTCTTCATCTTAGTGGAGATCTCAATCGAATGTTGAAACCCTACAAGGCGGTTCAAGAGAACTAGGGCTGATGGTGATGAATGATATATAACATCGTATTTGCCAAAAAGTTTATCGATTTTATATGTTATGTGTAATGAATAAAACGAAACTGTATGTCAGCAAGGGGTTTGAAAGTTGACATGGGCTTTTATAGCTTAGAAACCTTTTTTCTTTTCTATATTTTTAA

mRNA sequence

ATGGAAAAGGTGAATAGATTAGCAGCTGAAAATGAAGTGCTAATAATAAGCAAGAGTTCTTGCTGCCTTTGTTATGCTGTGAGTGTTCTTCTAAGGGATCTTGGAGTTAGTCCCATGGTGTACGAGCTTGATCAAGACCCTGAAGGAAGAGACATGGAGAAGGCTCTTGTAAGGCTTCAAGGCTGCAACACGCCACCTGTTCCCGCTGTCTTCATTGCCGGAGACCTCGTCGGGTCAACCAATGAACTGATGTCTCTTCATCTTAGTGGAGATCTCAATCGAATGTTGAAACCCTACAAGGCGGTTCAAGAGAACTAG

Coding sequence (CDS)

ATGGAAAAGGTGAATAGATTAGCAGCTGAAAATGAAGTGCTAATAATAAGCAAGAGTTCTTGCTGCCTTTGTTATGCTGTGAGTGTTCTTCTAAGGGATCTTGGAGTTAGTCCCATGGTGTACGAGCTTGATCAAGACCCTGAAGGAAGAGACATGGAGAAGGCTCTTGTAAGGCTTCAAGGCTGCAACACGCCACCTGTTCCCGCTGTCTTCATTGCCGGAGACCTCGTCGGGTCAACCAATGAACTGATGTCTCTTCATCTTAGTGGAGATCTCAATCGAATGTTGAAACCCTACAAGGCGGTTCAAGAGAACTAG

Protein sequence

MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQGCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN*
Homology
[Close]
BLAST of Csa7G230940 vs. Swiss-Prot
Match: GRXS9_ARATH (Monothiol glutaredoxin-S9 OS=Arabidopsis thaliana GN=GRXS9 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-28
Identity = 62/101 (61.39%), Postives = 82/101 (81.19%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           M+KV R+++E  V+I SKSSCC+ YAV VL +DLGV P V+E+D+DPE R++EKAL+RL 
Sbjct: 1   MDKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRL- 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKA 102
           GC+T PVPA+F+ G L+GSTNE+MSLHLSG L  ++KP++A
Sbjct: 61  GCST-PVPAIFVGGKLIGSTNEVMSLHLSGSLVPLVKPFQA 99

[Close]
BLAST of Csa7G230940 vs. Swiss-Prot
Match: GRC13_ARATH (Glutaredoxin-C13 OS=Arabidopsis thaliana GN=GRXC13 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-28
Identity = 61/102 (59.80%), Postives = 81/102 (79.41%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           M+KV R+++E  V+I +KSSCCLCYAV +L RDL V P ++E+D DP+ R++EKAL+RL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALLRL- 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAV 103
           GC+T  VPAVF+ G LVGSTNE+MSLHLSG L  ++KPY+++
Sbjct: 61  GCST-AVPAVFVGGKLVGSTNEVMSLHLSGSLVPLIKPYQSI 100

[Close]
BLAST of Csa7G230940 vs. Swiss-Prot
Match: GRC14_ARATH (Glutaredoxin-C14 OS=Arabidopsis thaliana GN=GRXC14 PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.2e-27
Identity = 60/101 (59.41%), Postives = 79/101 (78.22%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           M+KV R+++E  V+I +KSSCCLCYAV +L RDL V P ++E+D DP+ R++EKALVRL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALVRL- 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKA 102
           GC    VPAVF++G LVGSTN++MSLHLSG L  ++KPY++
Sbjct: 61  GC-ANAVPAVFVSGKLVGSTNDVMSLHLSGSLVPLIKPYQS 99

[Close]
BLAST of Csa7G230940 vs. Swiss-Prot
Match: GRS11_ARATH (Monothiol glutaredoxin-S11 OS=Arabidopsis thaliana GN=GRXS11 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.8e-27
Identity = 61/99 (61.62%), Postives = 79/99 (79.80%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           M+KV R+++E  V+I +KSSCCL YAV VL +DLGV+P ++E+D+DPE R++EKAL+RL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLSYAVQVLFQDLGVNPKIHEIDKDPECREIEKALMRL- 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPY 100
           GC + PVPAVFI G LVGSTNE+MS+HLS  L  ++KPY
Sbjct: 61  GC-SKPVPAVFIGGKLVGSTNEVMSMHLSSSLVPLVKPY 97

[Close]
BLAST of Csa7G230940 vs. Swiss-Prot
Match: GRXC1_ORYSJ (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.0e-25
Identity = 58/97 (59.79%), Postives = 75/97 (77.32%), Query Frame = 1 

Query: 1  MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
          M++VNRLAA+  V+I S SSCC+C+ V+ L  +LGV+P V ELD+DP G++MEKAL RL 
Sbjct: 1  MDRVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLL 60

Query: 61 GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLK 98
          G  +P VPAVFI G LVGST+++MSLHLSG+L  +L+
Sbjct: 61 G-RSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLR 96

[Close]
BLAST of Csa7G230940 vs. TrEMBL
Match: A0A0A0K5I6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G230940 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 5.1e-52
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ
Sbjct: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN 106
           GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN
Sbjct: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN 105

[Close]
BLAST of Csa7G230940 vs. TrEMBL
Match: A0A166HE67_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002796 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-32
Identity = 70/102 (68.63%), Postives = 88/102 (86.27%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           MEK++R+A+EN V+I SKS+CC+CYAV +L R+L V P+V+E+D+DPEGR+MEKAL+RL 
Sbjct: 1   MEKISRMASENGVVIFSKSTCCMCYAVDILFRELLVRPVVHEIDKDPEGREMEKALLRL- 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAV 103
           GCN P VPAVFI G LVGSTNE+MSLHLSG L  +LKPY+AV
Sbjct: 61  GCNAPAVPAVFIGGKLVGSTNEVMSLHLSGSLVTLLKPYQAV 101

[Close]
BLAST of Csa7G230940 vs. TrEMBL
Match: A0A166DAH0_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_005845 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.7e-32
Identity = 70/105 (66.67%), Postives = 87/105 (82.86%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           MEK++RL +EN V+I SKS+CCLCYAV +L ++L V P+VYE+D+DPEGR+MEKAL RL 
Sbjct: 1   MEKISRLVSENGVVIFSKSTCCLCYAVDILFQELEVRPVVYEIDKDPEGREMEKALYRL- 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN 106
           GC+ P VPAVFI G LVGSTNE+MSLHLSG L  ++KPY+AV  N
Sbjct: 61  GCSAPAVPAVFIGGKLVGSTNEVMSLHLSGSLVTLIKPYQAVLSN 104

[Close]
BLAST of Csa7G230940 vs. TrEMBL
Match: A0A103Y7I8_CYNCS (Glutaredoxin OS=Cynara cardunculus var. scolymus GN=Ccrd_017711 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.5e-32
Identity = 68/102 (66.67%), Postives = 88/102 (86.27%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           MEK+  L +EN V+I +KS+CCLCYAV++L ++L V+P+VYE+DQDPEGR+MEKAL + Q
Sbjct: 1   MEKIQSLTSENGVVIFTKSTCCLCYAVTILFQELRVNPVVYEIDQDPEGREMEKALPK-Q 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAV 103
           GCN+PPVPAVFI G LVGSTNE+MSLHLSG L  +LKPY+++
Sbjct: 61  GCNSPPVPAVFIGGKLVGSTNEVMSLHLSGSLIPLLKPYQSL 101

[Close]
BLAST of Csa7G230940 vs. TrEMBL
Match: A0A166DAI4_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_005846 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.5e-32
Identity = 70/105 (66.67%), Postives = 86/105 (81.90%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           MEK++RL +EN V+I SKS+CCLCYAV +L  +L V P+VYE+D+DPEGR+MEKAL RL 
Sbjct: 1   MEKISRLVSENGVVIFSKSTCCLCYAVDILFHELEVRPVVYEIDKDPEGREMEKALYRL- 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN 106
           GC+ P VPAVFI G LVGSTNE+MSLHLSG L  ++KPY+AV  N
Sbjct: 61  GCSAPAVPAVFIGGKLVGSTNEVMSLHLSGSLVTLIKPYQAVLSN 104

[Close]
BLAST of Csa7G230940 vs. TAIR10
Match: AT2G30540.1 (AT2G30540.1 Thioredoxin superfamily protein)

HSP 1 Score: 126.7 bits (317), Expect = 8.4e-30
Identity = 62/101 (61.39%), Postives = 82/101 (81.19%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           M+KV R+++E  V+I SKSSCC+ YAV VL +DLGV P V+E+D+DPE R++EKAL+RL 
Sbjct: 1   MDKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRL- 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKA 102
           GC+T PVPA+F+ G L+GSTNE+MSLHLSG L  ++KP++A
Sbjct: 61  GCST-PVPAIFVGGKLIGSTNEVMSLHLSGSLVPLVKPFQA 99

[Close]
BLAST of Csa7G230940 vs. TAIR10
Match: AT2G47880.1 (AT2G47880.1 Glutaredoxin family protein)

HSP 1 Score: 126.7 bits (317), Expect = 8.4e-30
Identity = 61/102 (59.80%), Postives = 81/102 (79.41%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           M+KV R+++E  V+I +KSSCCLCYAV +L RDL V P ++E+D DP+ R++EKAL+RL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALLRL- 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAV 103
           GC+T  VPAVF+ G LVGSTNE+MSLHLSG L  ++KPY+++
Sbjct: 61  GCST-AVPAVFVGGKLVGSTNEVMSLHLSGSLVPLIKPYQSI 100

[Close]
BLAST of Csa7G230940 vs. TAIR10
Match: AT3G62960.1 (AT3G62960.1 Thioredoxin superfamily protein)

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-28
Identity = 60/101 (59.41%), Postives = 79/101 (78.22%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           M+KV R+++E  V+I +KSSCCLCYAV +L RDL V P ++E+D DP+ R++EKALVRL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALVRL- 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKA 102
           GC    VPAVF++G LVGSTN++MSLHLSG L  ++KPY++
Sbjct: 61  GC-ANAVPAVFVSGKLVGSTNDVMSLHLSGSLVPLIKPYQS 99

[Close]
BLAST of Csa7G230940 vs. TAIR10
Match: AT1G06830.1 (AT1G06830.1 Glutaredoxin family protein)

HSP 1 Score: 122.5 bits (306), Expect = 1.6e-28
Identity = 61/99 (61.62%), Postives = 79/99 (79.80%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           M+KV R+++E  V+I +KSSCCL YAV VL +DLGV+P ++E+D+DPE R++EKAL+RL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLSYAVQVLFQDLGVNPKIHEIDKDPECREIEKALMRL- 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPY 100
           GC + PVPAVFI G LVGSTNE+MS+HLS  L  ++KPY
Sbjct: 61  GC-SKPVPAVFIGGKLVGSTNEVMSMHLSSSLVPLVKPY 97

[Close]
BLAST of Csa7G230940 vs. TAIR10
Match: AT2G47870.1 (AT2G47870.1 Thioredoxin superfamily protein)

HSP 1 Score: 108.2 bits (269), Expect = 3.1e-24
Identity = 50/102 (49.02%), Postives = 70/102 (68.63%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           ME+V  LA+E   +I +KSSCC+C+++  L  +LG SP ++ELD+DP+G DME+AL R+ 
Sbjct: 1   MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVF 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAV 103
           G N P VPAVF+ G  VGS  +++S H+ G L +MLK   A+
Sbjct: 61  GSN-PAVPAVFVGGRYVGSAKDVISFHVDGSLKQMLKASNAI 101

[Close]
BLAST of Csa7G230940 vs. NCBI nr
Match: gi|449444230|ref|XP_004139878.1| (PREDICTED: glutaredoxin-C13-like [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 7.4e-52
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ
Sbjct: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN 106
           GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN
Sbjct: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN 105

[Close]
BLAST of Csa7G230940 vs. NCBI nr
Match: gi|1021052362|gb|KZN10140.1| (hypothetical protein DCAR_002796 [Daucus carota subsp. sativus])

HSP 1 Score: 146.7 bits (369), Expect = 2.2e-32
Identity = 70/102 (68.63%), Postives = 88/102 (86.27%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           MEK++R+A+EN V+I SKS+CC+CYAV +L R+L V P+V+E+D+DPEGR+MEKAL+RL 
Sbjct: 1   MEKISRMASENGVVIFSKSTCCMCYAVDILFRELLVRPVVHEIDKDPEGREMEKALLRL- 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAV 103
           GCN P VPAVFI G LVGSTNE+MSLHLSG L  +LKPY+AV
Sbjct: 61  GCNAPAVPAVFIGGKLVGSTNEVMSLHLSGSLVTLLKPYQAV 101

[Close]
BLAST of Csa7G230940 vs. NCBI nr
Match: gi|1021047228|gb|KZN05008.1| (hypothetical protein DCAR_005845 [Daucus carota subsp. sativus])

HSP 1 Score: 146.0 bits (367), Expect = 3.8e-32
Identity = 70/105 (66.67%), Postives = 87/105 (82.86%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           MEK++RL +EN V+I SKS+CCLCYAV +L ++L V P+VYE+D+DPEGR+MEKAL RL 
Sbjct: 1   MEKISRLVSENGVVIFSKSTCCLCYAVDILFQELEVRPVVYEIDKDPEGREMEKALYRL- 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN 106
           GC+ P VPAVFI G LVGSTNE+MSLHLSG L  ++KPY+AV  N
Sbjct: 61  GCSAPAVPAVFIGGKLVGSTNEVMSLHLSGSLVTLIKPYQAVLSN 104

[Close]
BLAST of Csa7G230940 vs. NCBI nr
Match: gi|976918808|gb|KVI03968.1| (Glutaredoxin [Cynara cardunculus var. scolymus])

HSP 1 Score: 145.6 bits (366), Expect = 5.0e-32
Identity = 68/102 (66.67%), Postives = 88/102 (86.27%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           MEK+  L +EN V+I +KS+CCLCYAV++L ++L V+P+VYE+DQDPEGR+MEKAL + Q
Sbjct: 1   MEKIQSLTSENGVVIFTKSTCCLCYAVTILFQELRVNPVVYEIDQDPEGREMEKALPK-Q 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAV 103
           GCN+PPVPAVFI G LVGSTNE+MSLHLSG L  +LKPY+++
Sbjct: 61  GCNSPPVPAVFIGGKLVGSTNEVMSLHLSGSLIPLLKPYQSL 101

[Close]
BLAST of Csa7G230940 vs. NCBI nr
Match: gi|1021047229|gb|KZN05009.1| (hypothetical protein DCAR_005846 [Daucus carota subsp. sativus])

HSP 1 Score: 145.6 bits (366), Expect = 5.0e-32
Identity = 70/105 (66.67%), Postives = 86/105 (81.90%), Query Frame = 1 

Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60
           MEK++RL +EN V+I SKS+CCLCYAV +L  +L V P+VYE+D+DPEGR+MEKAL RL 
Sbjct: 1   MEKISRLVSENGVVIFSKSTCCLCYAVDILFHELEVRPVVYEIDKDPEGREMEKALYRL- 60

Query: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN 106
           GC+ P VPAVFI G LVGSTNE+MSLHLSG L  ++KPY+AV  N
Sbjct: 61  GCSAPAVPAVFIGGKLVGSTNEVMSLHLSGSLVTLIKPYQAVLSN 104

The following BLAST results are available for this feature:
BLAST of Csa7G230940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GRXS9_ARATH1.5e-2861.39Monothiol glutaredoxin-S9 OS=Arabidopsis thaliana GN=GRXS9 PE=3 SV=1[more]
GRC13_ARATH1.5e-2859.80Glutaredoxin-C13 OS=Arabidopsis thaliana GN=GRXC13 PE=3 SV=1[more]
GRC14_ARATH2.2e-2759.41Glutaredoxin-C14 OS=Arabidopsis thaliana GN=GRXC14 PE=3 SV=1[more]
GRS11_ARATH2.8e-2761.62Monothiol glutaredoxin-S11 OS=Arabidopsis thaliana GN=GRXS11 PE=3 SV=1[more]
GRXC1_ORYSJ2.0e-2559.79Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1[more]
BLAST of Csa7G230940 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5I6_CUCSA5.1e-52100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G230940 PE=4 SV=1[more]
A0A166HE67_DAUCA1.6e-3268.63Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002796 PE=4 SV=1[more]
A0A166DAH0_DAUCA2.7e-3266.67Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_005845 PE=4 SV=1[more]
A0A103Y7I8_CYNCS3.5e-3266.67Glutaredoxin OS=Cynara cardunculus var. scolymus GN=Ccrd_017711 PE=4 SV=1[more]
A0A166DAI4_DAUCA3.5e-3266.67Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_005846 PE=4 SV=1[more]
BLAST of Csa7G230940 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G30540.18.4e-3061.39 Thioredoxin superfamily protein[more]
AT2G47880.18.4e-3059.80 Glutaredoxin family protein[more]
AT3G62960.11.2e-2859.41 Thioredoxin superfamily protein[more]
AT1G06830.11.6e-2861.62 Glutaredoxin family protein[more]
AT2G47870.13.1e-2449.02 Thioredoxin superfamily protein[more]
BLAST of Csa7G230940 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449444230|ref|XP_004139878.1|7.4e-52100.00PREDICTED: glutaredoxin-C13-like [Cucumis sativus][more]
gi|1021052362|gb|KZN10140.1|2.2e-3268.63hypothetical protein DCAR_002796 [Daucus carota subsp. sativus][more]
gi|1021047228|gb|KZN05008.1|3.8e-3266.67hypothetical protein DCAR_005845 [Daucus carota subsp. sativus][more]
gi|976918808|gb|KVI03968.1|5.0e-3266.67Glutaredoxin [Cynara cardunculus var. scolymus][more]
gi|1021047229|gb|KZN05009.1|5.0e-3266.67hypothetical protein DCAR_005846 [Daucus carota subsp. sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002109Glutaredoxin
IPR011905GlrX-like_pln_2
IPR012336Thioredoxin-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0015035protein disulfide oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0022900 electron transport chain
cellular_component GO:0005623 cell
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU174012cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G230940.1Csa7G230940.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU174012CU174012transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 13..77
score: 1.
IPR002109GlutaredoxinPROFILEPS51354GLUTAREDOXIN_2coord: 1..103
score: 19
IPR011905Glutaredoxin-like, plant IITIGRFAMsTIGR02189TIGR02189coord: 4..102
score: 2.7
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 2..101
score: 9.0
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 1..101
score: 3.05
NoneNo IPR availablePANTHERPTHR10168GLUTAREDOXINcoord: 1..102
score: 5.9
NoneNo IPR availablePANTHERPTHR10168:SF57GLUTAREDOXIN-C13-RELATEDcoord: 1..102
score: 5.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G230940MELO3C012679Melon (DHL92) v3.5.1cumeB533
Csa7G230940MELO3C012679.2Melon (DHL92) v3.6.1cumedB512
Csa7G230940CSPI07G10290Wild cucumber (PI 183967)cpicuB354
Csa7G230940Cucsa.239210Cucumber (Gy14) v1cgycuB341
Csa7G230940CsGy7G009730Cucumber (Gy14) v2cgybcuB323
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G230940Cucumber (Chinese Long) v2cucuB175