Csa7G230900 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G230900
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 8066176 .. 8066406 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCGGTGCAGTAAGGGTAAGGCGAGGAAGGCACTTTTGAAAGAAAGAGGAAACTACGTTTTGAAATGGGAGTTCAGGTTGGTGTCGAGAAGGGTTGTTGAGGAGTCAGACGTTGAAGTCCTGAACGCAGTGAGAATATGCAGTAGAGAAGTGGCTGCTTGGAGGGAAGAATGGAAAAGGGACAGGTGTCGTGTAGCTAAAATCTTGGATATGAGGTGGCGAGATTAA

mRNA sequence

ATGAGGCGGTGCAGTAAGGGTAAGGCGAGGAAGGCACTTTTGAAAGAAAGAGGAAACTACGTTTTGAAATGGGAGTTCAGGTTGGTGTCGAGAAGGGTTGTTGAGGAGTCAGACGTTGAAGTCCTGAACGCAGTGAGAATATGCAGTAGAGAAGTGGCTGCTTGGAGGGAAGAATGGAAAAGGGACAGGTGTCGTGTAGCTAAAATCTTGGATATGAGGTGGCGAGATTAA

Coding sequence (CDS)

ATGAGGCGGTGCAGTAAGGGTAAGGCGAGGAAGGCACTTTTGAAAGAAAGAGGAAACTACGTTTTGAAATGGGAGTTCAGGTTGGTGTCGAGAAGGGTTGTTGAGGAGTCAGACGTTGAAGTCCTGAACGCAGTGAGAATATGCAGTAGAGAAGTGGCTGCTTGGAGGGAAGAATGGAAAAGGGACAGGTGTCGTGTAGCTAAAATCTTGGATATGAGGTGGCGAGATTAA

Protein sequence

MRRCSKGKARKALLKERGNYVLKWEFRLVSRRVVEESDVEVLNAVRICSREVAAWREEWKRDRCRVAKILDMRWRD*
Homology
[Close]
BLAST of Csa7G230900 vs. TrEMBL
Match: A0A0A0K3E3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G230900 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 2.9e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 

Query: 1  MRRCSKGKARKALLKERGNYVLKWEFRLVSRRVVEESDVEVLNAVRICSREVAAWREEWK 60
          MRRCSKGKARKALLKERGNYVLKWEFRLVSRRVVEESDVEVLNAVRICSREVAAWREEWK
Sbjct: 1  MRRCSKGKARKALLKERGNYVLKWEFRLVSRRVVEESDVEVLNAVRICSREVAAWREEWK 60

Query: 61 RDRCRVAKILDMRWRD 77
          RDRCRVAKILDMRWRD
Sbjct: 61 RDRCRVAKILDMRWRD 76

[Close]
BLAST of Csa7G230900 vs. NCBI nr
Match: gi|700188982|gb|KGN44215.1| (hypothetical protein Csa_7G230900 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 4.1e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 

Query: 1  MRRCSKGKARKALLKERGNYVLKWEFRLVSRRVVEESDVEVLNAVRICSREVAAWREEWK 60
          MRRCSKGKARKALLKERGNYVLKWEFRLVSRRVVEESDVEVLNAVRICSREVAAWREEWK
Sbjct: 1  MRRCSKGKARKALLKERGNYVLKWEFRLVSRRVVEESDVEVLNAVRICSREVAAWREEWK 60

Query: 61 RDRCRVAKILDMRWRD 77
          RDRCRVAKILDMRWRD
Sbjct: 61 RDRCRVAKILDMRWRD 76

The following BLAST results are available for this feature:
BLAST of Csa7G230900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3E3_CUCSA2.9e-36100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G230900 PE=4 SV=1[more]
BLAST of Csa7G230900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188982|gb|KGN44215.1|4.1e-36100.00hypothetical protein Csa_7G230900 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0043170 macromolecule metabolic process
biological_process GO:0044238 primary metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G230900.1Csa7G230900.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G230900CSPI07G10260Wild cucumber (PI 183967)cpicuB354
Csa7G230900Cucsa.239190Cucumber (Gy14) v1cgycuB341
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G230900Cucumber (Chinese Long) v2cucuB175
Csa7G230900Melon (DHL92) v3.5.1cumeB533
Csa7G230900Cucumber (Gy14) v2cgybcuB323
Csa7G230900Melon (DHL92) v3.6.1cumedB512