Csa7G220330 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G220330
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 7897035 .. 7897246 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACTAACAGTAGCACTGTTGAAGATGATTCTAAATCCCTATGGCAATATGTGATTAAGATTAAGAAGTTAAGTGACGGAGGTGGAAATTTTTCATGGCAATGCAATTTTTGTCACGTTATAAAGAAGAGCTCATATACAAGAGTGAGAGCTCACTTGCTGAAGATAGTTGGTCAAGGAATTGGGTCATGTCTAAAGGTTACTCCTAA

mRNA sequence

ATGGAAACTAACAGTAGCACTGTTGAAGATGATTCTAAATCCCTATGGCAATATGTGATTAAGATTAAGAAGTTAAGTGACGGAGAAGAGCTCATATACAAGAGTGAGAGCTCACTTGCTGAAGATAGTTGGTCAAGGAATTGGGTCATGTCTAAAGGTTACTCCTAA

Coding sequence (CDS)

ATGGAAACTAACAGTAGCACTGTTGAAGATGATTCTAAATCCCTATGGCAATATGTGATTAAGATTAAGAAGTTAAGTGACGGAGAAGAGCTCATATACAAGAGTGAGAGCTCACTTGCTGAAGATAGTTGGTCAAGGAATTGGGTCATGTCTAAAGGTTACTCCTAA

Protein sequence

METNSSTVEDDSKSLWQYVIKIKKLSDGEELIYKSESSLAEDSWSRNWVMSKGYS*
Homology
[Close]
BLAST of Csa7G220330 vs. TrEMBL
Match: A0A0A0K5G7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G220330 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 5.9e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1  METNSSTVEDDSKSLWQYVIKIKKLSDGEELIYKSESSLAEDSWSRNWVMSKGYS 56
          METNSSTVEDDSKSLWQYVIKIKKLSDGEELIYKSESSLAEDSWSRNWVMSKGYS
Sbjct: 1  METNSSTVEDDSKSLWQYVIKIKKLSDGEELIYKSESSLAEDSWSRNWVMSKGYS 55

[Close]
BLAST of Csa7G220330 vs. NCBI nr
Match: gi|700188966|gb|KGN44199.1| (hypothetical protein Csa_7G220330 [Cucumis sativus])

HSP 1 Score: 114.0 bits (284), Expect = 8.5e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1  METNSSTVEDDSKSLWQYVIKIKKLSDGEELIYKSESSLAEDSWSRNWVMSKGYS 56
          METNSSTVEDDSKSLWQYVIKIKKLSDGEELIYKSESSLAEDSWSRNWVMSKGYS
Sbjct: 1  METNSSTVEDDSKSLWQYVIKIKKLSDGEELIYKSESSLAEDSWSRNWVMSKGYS 55

The following BLAST results are available for this feature:
BLAST of Csa7G220330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5G7_CUCSA5.9e-23100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G220330 PE=4 SV=1[more]
BLAST of Csa7G220330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188966|gb|KGN44199.1|8.5e-23100.00hypothetical protein Csa_7G220330 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU085158cucumber EST collection version 3.0transcribed_cluster
CU122309cucumber EST collection version 3.0transcribed_cluster
CU122335cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G220330.1Csa7G220330.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU085158CU085158transcribed_cluster
CU122309CU122309transcribed_cluster
CU122335CU122335transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G220330Cucumber (Gy14) v1cgycuB218
Csa7G220330Cucurbita maxima (Rimu)cmacuB492
Csa7G220330Cucurbita moschata (Rifu)cmocuB482
Csa7G220330Cucumber (Gy14) v2cgybcuB323