Csa7G219820 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G219820
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 7888003 .. 7888761 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAGAAACACCGAAAAAAATACATTTCCCCCCGCCCCAAGTTCAACCTCTCTGCTTCCATTTTTTCTTCTCCATATAAAACCCATCACTATCCATTCCTTGGTTCTCAATTTGTTCTCCGATTTTGACCGGTAAGCTTCCTTTTCAATCTCCATATTTTTGTTTCTCTCTTTCCCTTTCCTCAAATCCTTATGTTGCCCCAATTTTAGGTTGCGAAATTGTATTCATCGATCCGAATTGAGGCACAACAGAGTTTCGAATCTCCATTTGATTCAGCGAGGTGGCGGTTTTTGCTCTAGCTTGGAGACCTGCGGGTTTGAATTCCTTTTTCATTTTCAATATTTTTTAGCTGATTGATTATTGATTCGTCTGTTGCCGAAAGTGCTCTATTGATGATCGTTCTCAATTTGGTCGCCAGTTTCTTTTGTCCTTGTCCTTGGAAGAGCATTTTTTGTGCTTTTAATGTTTTCTGGATTTCGTTAGGGCTTATCTAGAATATGTTTTCATGGTCTTTGTGGTGAAACGGAAATATAGTTTGTTGGTGTTTCCATGATTATTGTTTGAATGCGAAATACCTCCCTGCTTATACATTAGAAAGTCAACTGAGTCGAGGCACGATGTATCAATTATATGAAAAGAAAAAAAATACAATCATTGAAATCTGCCATACATCGGTCTCTCTTGACTTTGTTTTGTTTTGCCTTTAACGTAATTTAAGGAACGAGATTATGATGAGTTGTATGTATATTCAGGTAG

mRNA sequence

ATGCAAAGAAACACCGAAAAAAATACATTTCCCCCCGCCCCAAGTTCAACCTCTCTGCTTCCATTTTTTCTTCTCCATATAAAACCCATCACTATCCATTCCTTGGTTCTCAATTTGTTCTCCGATTTTGACCGGTTGCGAAATTGTATTCATCGATCCGAATTGAGGCACAACAGAGTTTCGAATCTCCATTTGATTCAGCGAGGTGGCGGTTTTTGCTCTAGCTTGGAGACCTGCGGGTAG

Coding sequence (CDS)

ATGCAAAGAAACACCGAAAAAAATACATTTCCCCCCGCCCCAAGTTCAACCTCTCTGCTTCCATTTTTTCTTCTCCATATAAAACCCATCACTATCCATTCCTTGGTTCTCAATTTGTTCTCCGATTTTGACCGGTTGCGAAATTGTATTCATCGATCCGAATTGAGGCACAACAGAGTTTCGAATCTCCATTTGATTCAGCGAGGTGGCGGTTTTTGCTCTAGCTTGGAGACCTGCGGGTAG

Protein sequence

MQRNTEKNTFPPAPSSTSLLPFFLLHIKPITIHSLVLNLFSDFDRLRNCIHRSELRHNRVSNLHLIQRGGGFCSSLETCG*
Homology
[Close]
BLAST of Csa7G219820 vs. TrEMBL
Match: A0A0A0K7A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G219820 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 2.9e-39
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1 

Query: 1  MQRNTEKNTFPPAPSSTSLLPFFLLHIKPITIHSLVLNLFSDFDRLRNCIHRSELRHNRV 60
          MQRNTEKNTFPPAPSSTSLLPFFLLHIKPITIHSLVLNLFSDFDRLRNCIHRSELRHNRV
Sbjct: 1  MQRNTEKNTFPPAPSSTSLLPFFLLHIKPITIHSLVLNLFSDFDRLRNCIHRSELRHNRV 60

Query: 61 SNLHLIQRGGGFCSSLETCG 81
          SNLHLIQRGGGFCSSLETCG
Sbjct: 61 SNLHLIQRGGGFCSSLETCG 80

[Close]
BLAST of Csa7G219820 vs. NCBI nr
Match: gi|700188964|gb|KGN44197.1| (hypothetical protein Csa_7G219820 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 4.2e-39
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1 

Query: 1  MQRNTEKNTFPPAPSSTSLLPFFLLHIKPITIHSLVLNLFSDFDRLRNCIHRSELRHNRV 60
          MQRNTEKNTFPPAPSSTSLLPFFLLHIKPITIHSLVLNLFSDFDRLRNCIHRSELRHNRV
Sbjct: 1  MQRNTEKNTFPPAPSSTSLLPFFLLHIKPITIHSLVLNLFSDFDRLRNCIHRSELRHNRV 60

Query: 61 SNLHLIQRGGGFCSSLETCG 81
          SNLHLIQRGGGFCSSLETCG
Sbjct: 61 SNLHLIQRGGGFCSSLETCG 80

The following BLAST results are available for this feature:
BLAST of Csa7G219820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7A2_CUCSA2.9e-39100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G219820 PE=4 SV=1[more]
BLAST of Csa7G219820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188964|gb|KGN44197.1|4.2e-39100.00hypothetical protein Csa_7G219820 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G219820.1Csa7G219820.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G219820Cucurbita maxima (Rimu)cmacuB492
Csa7G219820Cucurbita moschata (Rifu)cmocuB482
Csa7G219820Cucumber (Gy14) v2cgybcuB323
Csa7G219820Cucumber (Gy14) v1cgycuB218