Csa7G219270 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G219270
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 7847538 .. 7847902 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCCATAAGTGAGCGGGTGGCTAATAGGGCTTCACATGATGTGATACCACGCATCATGCAATGGAGTTGCACTTACTCACTTGGGTTAAAGGTGATTGAGTCACATGTCTTTGGGTCCCAAATGGGTTGTCTTGGTTTCTTTTGTTCTTCCACCTTCACTTTAGGGTTTAAGGTTTAATAACTAATAATTAATGGTTTATGTTTCAAATTCAGATATGTATGCAAGCAATTGAGCCAACACATGAAGAGCTTGCATACCTAGATACGGGTCTTGATATCCCTTCTACAGAAGGCTACAAAGATAACCTCGATGCTCCTCTTCGAGACGATGATGCTCCATCATTCAATCCTCATGCATAG

mRNA sequence

ATGTCATCCATAAGTGAGCGGGTGGCTAATAGGGCTTCACATGATGTGATACCACGCATCATGCAATGGAGTTGCACTTACTCACTTGGGTTAAAGATATGTATGCAAGCAATTGAGCCAACACATGAAGAGCTTGCATACCTAGATACGGGTCTTGATATCCCTTCTACAGAAGGCTACAAAGATAACCTCGATGCTCCTCTTCGAGACGATGATGCTCCATCATTCAATCCTCATGCATAG

Coding sequence (CDS)

ATGTCATCCATAAGTGAGCGGGTGGCTAATAGGGCTTCACATGATGTGATACCACGCATCATGCAATGGAGTTGCACTTACTCACTTGGGTTAAAGATATGTATGCAAGCAATTGAGCCAACACATGAAGAGCTTGCATACCTAGATACGGGTCTTGATATCCCTTCTACAGAAGGCTACAAAGATAACCTCGATGCTCCTCTTCGAGACGATGATGCTCCATCATTCAATCCTCATGCATAG

Protein sequence

MSSISERVANRASHDVIPRIMQWSCTYSLGLKICMQAIEPTHEELAYLDTGLDIPSTEGYKDNLDAPLRDDDAPSFNPHA*
Homology
[Close]
BLAST of Csa7G219270 vs. TrEMBL
Match: A0A0A0K8S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G219270 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 2.9e-39
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1 

Query: 1  MSSISERVANRASHDVIPRIMQWSCTYSLGLKICMQAIEPTHEELAYLDTGLDIPSTEGY 60
          MSSISERVANRASHDVIPRIMQWSCTYSLGLKICMQAIEPTHEELAYLDTGLDIPSTEGY
Sbjct: 1  MSSISERVANRASHDVIPRIMQWSCTYSLGLKICMQAIEPTHEELAYLDTGLDIPSTEGY 60

Query: 61 KDNLDAPLRDDDAPSFNPHA 81
          KDNLDAPLRDDDAPSFNPHA
Sbjct: 61 KDNLDAPLRDDDAPSFNPHA 80

[Close]
BLAST of Csa7G219270 vs. NCBI nr
Match: gi|700188958|gb|KGN44191.1| (hypothetical protein Csa_7G219270 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 4.2e-39
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1 

Query: 1  MSSISERVANRASHDVIPRIMQWSCTYSLGLKICMQAIEPTHEELAYLDTGLDIPSTEGY 60
          MSSISERVANRASHDVIPRIMQWSCTYSLGLKICMQAIEPTHEELAYLDTGLDIPSTEGY
Sbjct: 1  MSSISERVANRASHDVIPRIMQWSCTYSLGLKICMQAIEPTHEELAYLDTGLDIPSTEGY 60

Query: 61 KDNLDAPLRDDDAPSFNPHA 81
          KDNLDAPLRDDDAPSFNPHA
Sbjct: 61 KDNLDAPLRDDDAPSFNPHA 80

The following BLAST results are available for this feature:
BLAST of Csa7G219270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8S4_CUCSA2.9e-39100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G219270 PE=4 SV=1[more]
BLAST of Csa7G219270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188958|gb|KGN44191.1|4.2e-39100.00hypothetical protein Csa_7G219270 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G219270.1Csa7G219270.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G219270CSPI07G10070Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G219270Cucumber (Gy14) v1cgycuB218
Csa7G219270Cucurbita maxima (Rimu)cmacuB492
Csa7G219270Cucurbita moschata (Rifu)cmocuB482
Csa7G219270Bottle gourd (USVL1VR-Ls)culsiB497
Csa7G219270Cucumber (Gy14) v2cgybcuB323