Csa7G212640 (gene) Cucumber (Chinese Long) v2

NameCsa7G212640
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 7606324 .. 7606515 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGACCATTAGACAGTGGCAATTCAAGAAGCCCAAGATATTCAATGTTTATCATTCTCACAGTGATATTAAAGTTGACACCAATGCACCAAGGATCTTCCTAGTAGCAGAACTCGTTCCAAAGAAATTTCCCCTCATGATGGTCGTCAAAAGCATCGCCCTCCACCCCCTCCCTGTTGCCTCTGCTTGA

mRNA sequence

ATGCCGACCATTAGACAGTGGCAATTCAAGAAGCCCAAGATATTCAATGTTTATCATTCTCACAGTGATATTAAAGTTGACACCAATGCACCAAGGATCTTCCTAGTAGCAGAACTCGTTCCAAAGAAATTTCCCCTCATGATGGTCGTCAAAAGCATCGCCCTCCACCCCCTCCCTGTTGCCTCTGCTTGA

Coding sequence (CDS)

ATGCCGACCATTAGACAGTGGCAATTCAAGAAGCCCAAGATATTCAATGTTTATCATTCTCACAGTGATATTAAAGTTGACACCAATGCACCAAGGATCTTCCTAGTAGCAGAACTCGTTCCAAAGAAATTTCCCCTCATGATGGTCGTCAAAAGCATCGCCCTCCACCCCCTCCCTGTTGCCTCTGCTTGA

Protein sequence

MPTIRQWQFKKPKIFNVYHSHSDIKVDTNAPRIFLVAELVPKKFPLMMVVKSIALHPLPVASA*
BLAST of Csa7G212640 vs. TrEMBL
Match: A0A0A0K3T6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G212640 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 5.3e-28
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1

Query: 1  MPTIRQWQFKKPKIFNVYHSHSDIKVDTNAPRIFLVAELVPKKFPLMMVVKSIALHPLPV 60
          MPTIRQWQFKKPKIFNVYHSHSDIKVDTNAPRIFLVAELVPKKFPLMMVVKSIALHPLPV
Sbjct: 1  MPTIRQWQFKKPKIFNVYHSHSDIKVDTNAPRIFLVAELVPKKFPLMMVVKSIALHPLPV 60

Query: 61 ASA 64
          ASA
Sbjct: 61 ASA 63

BLAST of Csa7G212640 vs. NCBI nr
Match: gi|700188940|gb|KGN44173.1| (hypothetical protein Csa_7G212640 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 7.6e-28
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1

Query: 1  MPTIRQWQFKKPKIFNVYHSHSDIKVDTNAPRIFLVAELVPKKFPLMMVVKSIALHPLPV 60
          MPTIRQWQFKKPKIFNVYHSHSDIKVDTNAPRIFLVAELVPKKFPLMMVVKSIALHPLPV
Sbjct: 1  MPTIRQWQFKKPKIFNVYHSHSDIKVDTNAPRIFLVAELVPKKFPLMMVVKSIALHPLPV 60

Query: 61 ASA 64
          ASA
Sbjct: 61 ASA 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K3T6_CUCSA5.3e-28100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G212640 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700188940|gb|KGN44173.1|7.6e-28100.00hypothetical protein Csa_7G212640 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU155361cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G212640.1Csa7G212640.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU155361CU155361transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None