Csa7G207010 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G207010
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 7352852 .. 7353195 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATGGGCTCCTTACTTCTTCTCCAATCCCTTCAATGGAGTTTGTGATGGATCAACTTCAGAGGTTTAAGGAAATGGTAGTGTGCAGCCAAAGGATTTGGTTGTGGGAGACAAATTCAACGAATCCCTTTTTGATGGTCCCTAGTCCCAATCGCCAGCATCGGATCCCCAATCCCAAATGTCAAACTGGTTGTTATTCATCAATGCCTTGAGTGGTCACCAGTCGACGATCCTTGATCTCCATCAGCAGTCTGCAGTCGTCGGTCTTGGTTTTCAATCATCCATACCGAATTCTTAGTGCCAATCGCTGGTCAGAATTCCGCAGTCCCAGTCCACCACTAG

mRNA sequence

ATGAAATGGGCTCCTTACTTCTTCTCCAATCCCTTCAATGGAGTTTGTGATGGATCAACTTCAGAGTCCCAATCGCCAGCATCGGATCCCCAATCCCAAATGTCAAACTGGTTGTTATTCATCAATGCCTTGAGTGGTCACCAGTCGACGATCCTTGATCTCCATCAGCAGTCTGCAGTCGTCGGTCTTGTGCCAATCGCTGGTCAGAATTCCGCAGTCCCAGTCCACCACTAG

Coding sequence (CDS)

ATGAAATGGGCTCCTTACTTCTTCTCCAATCCCTTCAATGGAGTTTGTGATGGATCAACTTCAGAGTCCCAATCGCCAGCATCGGATCCCCAATCCCAAATGTCAAACTGGTTGTTATTCATCAATGCCTTGAGTGGTCACCAGTCGACGATCCTTGATCTCCATCAGCAGTCTGCAGTCGTCGGTCTTGTGCCAATCGCTGGTCAGAATTCCGCAGTCCCAGTCCACCACTAG

Protein sequence

MKWAPYFFSNPFNGVCDGSTSESQSPASDPQSQMSNWLLFINALSGHQSTILDLHQQSAVVGLVPIAGQNSAVPVHH*
Homology
[Close]
BLAST of Csa7G207010 vs. TrEMBL
Match: A0A0A0K396_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G207010 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.5e-37
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1 

Query: 1  MKWAPYFFSNPFNGVCDGSTSESQSPASDPQSQMSNWLLFINALSGHQSTILDLHQQSAV 60
          MKWAPYFFSNPFNGVCDGSTSESQSPASDPQSQMSNWLLFINALSGHQSTILDLHQQSAV
Sbjct: 1  MKWAPYFFSNPFNGVCDGSTSESQSPASDPQSQMSNWLLFINALSGHQSTILDLHQQSAV 60

Query: 61 VGLVPIAGQNSAVPVHH 78
          VGLVPIAGQNSAVPVHH
Sbjct: 61 VGLVPIAGQNSAVPVHH 77

[Close]
BLAST of Csa7G207010 vs. NCBI nr
Match: gi|700188917|gb|KGN44150.1| (hypothetical protein Csa_7G207010 [Cucumis sativus])

HSP 1 Score: 162.9 bits (411), Expect = 2.2e-37
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1 

Query: 1  MKWAPYFFSNPFNGVCDGSTSESQSPASDPQSQMSNWLLFINALSGHQSTILDLHQQSAV 60
          MKWAPYFFSNPFNGVCDGSTSESQSPASDPQSQMSNWLLFINALSGHQSTILDLHQQSAV
Sbjct: 1  MKWAPYFFSNPFNGVCDGSTSESQSPASDPQSQMSNWLLFINALSGHQSTILDLHQQSAV 60

Query: 61 VGLVPIAGQNSAVPVHH 78
          VGLVPIAGQNSAVPVHH
Sbjct: 61 VGLVPIAGQNSAVPVHH 77

The following BLAST results are available for this feature:
BLAST of Csa7G207010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K396_CUCSA1.5e-37100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G207010 PE=4 SV=1[more]
BLAST of Csa7G207010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188917|gb|KGN44150.1|2.2e-37100.00hypothetical protein Csa_7G207010 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU144084cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G207010.1Csa7G207010.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU144084CU144084transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G207010CSPI07G09670Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G207010Watermelon (97103) v2cuwmbB562
Csa7G207010Wax gourdcuwgoB692
Csa7G207010Cucumber (Gy14) v1cgycuB334
Csa7G207010Cucurbita maxima (Rimu)cmacuB493
Csa7G207010Cucurbita moschata (Rifu)cmocuB483
Csa7G207010Melon (DHL92) v3.5.1cumeB534
Csa7G207010Watermelon (Charleston Gray)cuwcgB518
Csa7G207010Watermelon (97103) v1cuwmB555
Csa7G207010Bottle gourd (USVL1VR-Ls)culsiB510
Csa7G207010Cucumber (Gy14) v2cgybcuB323
Csa7G207010Melon (DHL92) v3.6.1cumedB513