Csa7G197800 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G197800
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 7115737 .. 7116953 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAACGACACCGGAGTGGAGGAGAAGAAATCAAAGTGGAAGCAGGAAAGTTAGCACAAGGAGAAGAACGAGAATGTGCTTTTTTTAGTTTTAGATTGAAGAGAAAGAAAGGGAGGGAAAATAAATGAAGGGCAATTTAGACATGTCACCCGTAATTTGTCCTAAAACTCGACGTTTTCAAAATCAATCATAAAATTCATTTATTACTCTATTTTTTGGCTTTTTTTTTTTGGCAATTTTCCAATATAAGTATATCTTTTCAAGTTTTGGTGGATGGAATTCTCACAAAAAGTTTCAACCCCTCCATAGGATTATACCGAGGAGATGCAATCTTTCCTTATTTGTTTCTTCCATGTACTGAATGTTACAATCACAATTTTTGAAACACGAGAGGGGCGATTGTGTGACACTTGTTCTAGCTTGATCAACAAGTTAGCTATTTTAAATCTAAAAGTCGTGAACAAAATCACGGCATGATGTAGCCCCCTTCACATTTTGAGAGAAATTTGTTTTATAAAACGTGAGAAAAATAAGGAAAACAACATTAAAGAAAAGATTGAAGAGTGTCAATTGTAAAGAAAGCTTAGATTGCAAAGAGTATAGCAAGACGTGGTCGAGGATTCAACTAGTATATCTCTCCAATAGTACATTTTAAACTTTTTTAGTTTTGATAGACTTGTATATATGAAAAGTGTGAATCACCATACTCAACGTTAGTGACATAAAAAGAAAAGCAATAGACTGGACAATGTACAAAACATAAAAATAGGTGGCTTAAGGATGTTTGGACATGCGACCATATGCAAACAATCTATGGACTCATTGCTTATGACATTGAATGCCCCTATGCTCGCCTCGTTAGGGAAGAATCTCTTTCTAACATTTTCGACATTAAATTAAATTGGTTCTACCCTCTTTTAACTCATCTCTCTCTCATTTTTTTTTTTAGATGACAACTTTTTCTTCTTCAAGGATTCTTACAATGATTGTCAATCTATTAGAAAAAACCTGGCTAAGTACGAAAAGGCTTCTGGTCAGACGATTAACAGAGGAAAATTTGTGATTATTGCTAGCAAGAATATTGCCCATGAGAAATTAAAGGTGATTGAAGATTGGCTTGGGGTGAACCACGTCAAGTCCTTTGGCATGTATCTTGGTCTTCCTGCAAATAACTATCAAGACAGAAATCAAGTATTTAAAGGTGTTAAATCGTGA

mRNA sequence

ATGAAAACGACACCGGAGTGGAGGAGAAGAAATCAAAGTGGAAGCAGGAAAGATTCTTACAATGATTGTCAATCTATTAGAAAAAACCTGGCTAAGTACGAAAAGGCTTCTGGTCAGACGATTAACAGAGGAAAATTTGTGATTATTGCTAGCAAGAATATTGCCCATGAGAAATTAAAGGTGATTGAAGATTGGCTTGGGGTGAACCACGTCAAGTCCTTTGGCATGTATCTTGGTCTTCCTGCAAATAACTATCAAGACAGAAATCAAGTATTTAAAGGTGTTAAATCGTGA

Coding sequence (CDS)

ATGAAAACGACACCGGAGTGGAGGAGAAGAAATCAAAGTGGAAGCAGGAAAGATTCTTACAATGATTGTCAATCTATTAGAAAAAACCTGGCTAAGTACGAAAAGGCTTCTGGTCAGACGATTAACAGAGGAAAATTTGTGATTATTGCTAGCAAGAATATTGCCCATGAGAAATTAAAGGTGATTGAAGATTGGCTTGGGGTGAACCACGTCAAGTCCTTTGGCATGTATCTTGGTCTTCCTGCAAATAACTATCAAGACAGAAATCAAGTATTTAAAGGTGTTAAATCGTGA

Protein sequence

MKTTPEWRRRNQSGSRKDSYNDCQSIRKNLAKYEKASGQTINRGKFVIIASKNIAHEKLKVIEDWLGVNHVKSFGMYLGLPANNYQDRNQVFKGVKS*
Homology
[Close]
BLAST of Csa7G197800 vs. TrEMBL
Match: A0A0A0K5A5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G197800 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 3.8e-49
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1 

Query: 1  MKTTPEWRRRNQSGSRKDSYNDCQSIRKNLAKYEKASGQTINRGKFVIIASKNIAHEKLK 60
          MKTTPEWRRRNQSGSRKDSYNDCQSIRKNLAKYEKASGQTINRGKFVIIASKNIAHEKLK
Sbjct: 1  MKTTPEWRRRNQSGSRKDSYNDCQSIRKNLAKYEKASGQTINRGKFVIIASKNIAHEKLK 60

Query: 61 VIEDWLGVNHVKSFGMYLGLPANNYQDRNQVFKGVKS 98
          VIEDWLGVNHVKSFGMYLGLPANNYQDRNQVFKGVKS
Sbjct: 61 VIEDWLGVNHVKSFGMYLGLPANNYQDRNQVFKGVKS 97

[Close]
BLAST of Csa7G197800 vs. NCBI nr
Match: gi|700188891|gb|KGN44124.1| (hypothetical protein Csa_7G197800 [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 5.4e-49
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1 

Query: 1  MKTTPEWRRRNQSGSRKDSYNDCQSIRKNLAKYEKASGQTINRGKFVIIASKNIAHEKLK 60
          MKTTPEWRRRNQSGSRKDSYNDCQSIRKNLAKYEKASGQTINRGKFVIIASKNIAHEKLK
Sbjct: 1  MKTTPEWRRRNQSGSRKDSYNDCQSIRKNLAKYEKASGQTINRGKFVIIASKNIAHEKLK 60

Query: 61 VIEDWLGVNHVKSFGMYLGLPANNYQDRNQVFKGVKS 98
          VIEDWLGVNHVKSFGMYLGLPANNYQDRNQVFKGVKS
Sbjct: 61 VIEDWLGVNHVKSFGMYLGLPANNYQDRNQVFKGVKS 97

The following BLAST results are available for this feature:
BLAST of Csa7G197800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5A5_CUCSA3.8e-49100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G197800 PE=4 SV=1[more]
BLAST of Csa7G197800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188891|gb|KGN44124.1|5.4e-49100.00hypothetical protein Csa_7G197800 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G197800.1Csa7G197800.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G197800Cucumber (Gy14) v2cgybcuB323
Csa7G197800Melon (DHL92) v3.6.1cumedB513
Csa7G197800Silver-seed gourdcarcuB0084
Csa7G197800Silver-seed gourdcarcuB0464
Csa7G197800Watermelon (97103) v2cuwmbB573
Csa7G197800Wax gourdcuwgoB709
Csa7G197800Cucurbita maxima (Rimu)cmacuB044
Csa7G197800Cucurbita maxima (Rimu)cmacuB491
Csa7G197800Cucurbita moschata (Rifu)cmocuB033
Csa7G197800Cucurbita moschata (Rifu)cmocuB479
Csa7G197800Melon (DHL92) v3.5.1cumeB534
Csa7G197800Watermelon (Charleston Gray)cuwcgB527
Csa7G197800Watermelon (97103) v1cuwmB569
Csa7G197800Cucurbita pepo (Zucchini)cpecuB593
Csa7G197800Cucurbita pepo (Zucchini)cpecuB802
Csa7G197800Bottle gourd (USVL1VR-Ls)culsiB504