Csa7G192710 (gene) Cucumber (Chinese Long) v2

NameCsa7G192710
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 6964607 .. 6964853 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATTGAGGTAATTAAATACAATTTGAGGTATTTTTAGTTCTTCGTTCCCTCACCCATTTTCCTTAATTTCTTTGGAGTGCCCTCAAATCCACCTCAATCCTTGCCTTAAATTCAGTTGAGGAGATTATCATCATTCATCAACAAACCTCTTTGTTATCGGCTTGTTGGAGAATTTCAAGAGTTGTTTGGAGAAAGGAAAAGAAAAGACTATCTAGTCTTTTACTTGTTTGGCTCGAGGATTAA

mRNA sequence

ATGAAATTGAGTGCCCTCAAATCCACCTCAATCCTTGCCTTAAATTCAGTTGAGGAGATTATCATCATTCATCAACAAACCTCTTTGTTATCGGCTTGTTGGAGAATTTCAAGAGTTGTTTGGAGAAAGGAAAAGAAAAGACTATCTAGTCTTTTACTTGTTTGGCTCGAGGATTAA

Coding sequence (CDS)

ATGAAATTGAGTGCCCTCAAATCCACCTCAATCCTTGCCTTAAATTCAGTTGAGGAGATTATCATCATTCATCAACAAACCTCTTTGTTATCGGCTTGTTGGAGAATTTCAAGAGTTGTTTGGAGAAAGGAAAAGAAAAGACTATCTAGTCTTTTACTTGTTTGGCTCGAGGATTAA

Protein sequence

MKLSALKSTSILALNSVEEIIIIHQQTSLLSACWRISRVVWRKEKKRLSSLLLVWLED*
BLAST of Csa7G192710 vs. TrEMBL
Match: A0A0A0K368_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G192710 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 6.2e-23
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1

Query: 1  MKLSALKSTSILALNSVEEIIIIHQQTSLLSACWRISRVVWRKEKKRLSSLLLVWLED 59
          MKLSALKSTSILALNSVEEIIIIHQQTSLLSACWRISRVVWRKEKKRLSSLLLVWLED
Sbjct: 1  MKLSALKSTSILALNSVEEIIIIHQQTSLLSACWRISRVVWRKEKKRLSSLLLVWLED 58

BLAST of Csa7G192710 vs. NCBI nr
Match: gi|700188877|gb|KGN44110.1| (hypothetical protein Csa_7G192710 [Cucumis sativus])

HSP 1 Score: 114.0 bits (284), Expect = 8.9e-23
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1

Query: 1  MKLSALKSTSILALNSVEEIIIIHQQTSLLSACWRISRVVWRKEKKRLSSLLLVWLED 59
          MKLSALKSTSILALNSVEEIIIIHQQTSLLSACWRISRVVWRKEKKRLSSLLLVWLED
Sbjct: 1  MKLSALKSTSILALNSVEEIIIIHQQTSLLSACWRISRVVWRKEKKRLSSLLLVWLED 58

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K368_CUCSA6.2e-23100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G192710 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700188877|gb|KGN44110.1|8.9e-23100.00hypothetical protein Csa_7G192710 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G192710.1Csa7G192710.1mRNA


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..33
score:

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None