Csa7G184150 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G184150
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 6660499 .. 6661836 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGAATCTTCGACCCTCTTCAAGCTTGGCAACGGTTCCAGTTTCACTGTTTGGTCCAATCGGTGGTTTGATTCGCTGACTCTTAACTTCTGTTTTCCCAAGGTTGTTCGAAGATTGCTTTCTTACACAACGGATCTTTTGCGCTCTCTTACCCAACGGATCTTTTGCTGCACTTTGGGTCCTTTCTTGTTCTGCTTGGTCCTTATTTATCTGTGGGTTGGTGGATTTTTCATTCACTGCAACATGGCCCTTATATATCTTGGCTCCCTTTGTAAAGAAGGGGCCGAGACTATTTTTGAAATTTTTTGTCAACGGCTTCGCTTGCGAAGCTTTGGTTTGGGCATAATAAAAGGATATTTTATGTCAAAAGAAACAGGGTGGTTGGATTGTTTCGATATAGACAACAGGAACACTGCAGCTGGTGCATCCTATGCAAGGAATTTGAAGCCTTTTCTTTGTAGAACTTTGTTTGAATTGGCTTGCGTTTCCACTCCCAGATCGCTAGAAGAACATCCCCAGTCATGCTTACCAGTGGAGAGTAAAGAATTCTGGGCAAAGATTTGTATTGGCAAGATAGTTTGATTGAAGTAGCTGATTGCCTCTTCTTGATGTTCTCTTTCCTTTCATCTTGAAGCTTTTGGTGTGCATTTTTCAGATTATAGTAGCCTATGTTTGTGAGAGCATTTAAGTTTTACTTTGTATCTAGTTCTTTTCTGATGTTTCCAACCTTGGTTGCTTTGAATAGCTTGTTGCTTTATCTTTTGTGATCATTTTTAGGTCGTTTTCATTTTTAGGCCGTTTTCATTTTTTGTTGCCCGGGTACTTCCTTTGTTTCAGCTTTAGGCTGTATTTTCCTTTGTCATTTTGCTCTTTGCTCTTTGTATAATTATCTTGTACATAGAGTCTCGTATATTATTAATAATAAAGAGGCTCGTCTCCGTTTAAAAAAATATATATTTGAAACAAGCGATGGGCAAGTGTAGTAAAGATGTGAAGAAAATATATTAATGGAATTATGCAAACAAAATCCACTTAATAAGACCATGATGTGATGTGTCAAGATGGGGGAATGATTTTGAGATGAGAGCTTTTTGTTTGACTTGTCAGAGCTGTTCTTTGTTTTGTTGGTGCAAAATCCTACCTCCATGGGGAAAAATTAATTTTCTTTGAACTGACAATTAGAATGAGAAAAAAAAGGTCTAAATCTTATATCATATAAGCTTTGGTCAAAATAGGTTTGTGCAGATAAAACTGCTCTAGAAACATACTTCGTTTACCAAGCACTTGGCATTGTCCGAGTACTGATTCTATTTTTATATGTTACAGCATGCGTAA

mRNA sequence

ATGATGGAATCTTCGACCCTCTTCAAGCTTGGCAACGGTTCCAGTTTCACTGTTTGGTCCAATCGGTGGTTTGATTCGCTGACTCTTAACTTCTGTTTTCCCAAGGTTGTTCGAAGATTGCTTTCTTACACAACGGATCTTTTGCGCTCTCTTACCCAACGGATCTTTTGCTGCACTTTGGGTCCTTTCTTGTTCTGCTTGGTCCTTATTTATCTGTGGGTTGGTGGATTTTTCATTCACTGCAACATGGCCCTTATATATCTTGGCTCCCTTTGTAAAGAAGGGGCCGAGACTATTTTTGAAATTTTTTGTCAACGGCTTCGCTTGCGAAGCTTTGGTTTGGGCATAATAAAAGGATATTTTATGTCAAAAGAAACAGGGTGGTTGGATTGTTTCGATATAGACAACAGGAACACTGCAGCTGGTGCATCCTATGCAAGGAATTTGAAGCCTTTTCTTTGTAGAACTTTGTTTGAATTGGCTTGCCATGCGTAA

Coding sequence (CDS)

ATGATGGAATCTTCGACCCTCTTCAAGCTTGGCAACGGTTCCAGTTTCACTGTTTGGTCCAATCGGTGGTTTGATTCGCTGACTCTTAACTTCTGTTTTCCCAAGGTTGTTCGAAGATTGCTTTCTTACACAACGGATCTTTTGCGCTCTCTTACCCAACGGATCTTTTGCTGCACTTTGGGTCCTTTCTTGTTCTGCTTGGTCCTTATTTATCTGTGGGTTGGTGGATTTTTCATTCACTGCAACATGGCCCTTATATATCTTGGCTCCCTTTGTAAAGAAGGGGCCGAGACTATTTTTGAAATTTTTTGTCAACGGCTTCGCTTGCGAAGCTTTGGTTTGGGCATAATAAAAGGATATTTTATGTCAAAAGAAACAGGGTGGTTGGATTGTTTCGATATAGACAACAGGAACACTGCAGCTGGTGCATCCTATGCAAGGAATTTGAAGCCTTTTCTTTGTAGAACTTTGTTTGAATTGGCTTGCCATGCGTAA

Protein sequence

MMESSTLFKLGNGSSFTVWSNRWFDSLTLNFCFPKVVRRLLSYTTDLLRSLTQRIFCCTLGPFLFCLVLIYLWVGGFFIHCNMALIYLGSLCKEGAETIFEIFCQRLRLRSFGLGIIKGYFMSKETGWLDCFDIDNRNTAAGASYARNLKPFLCRTLFELACHA*
Homology
[Close]
BLAST of Csa7G184150 vs. TrEMBL
Match: A0A0A0K3L7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G184150 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.6e-92
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

Query: 1   MMESSTLFKLGNGSSFTVWSNRWFDSLTLNFCFPKVVRRLLSYTTDLLRSLTQRIFCCTL 60
           MMESSTLFKLGNGSSFTVWSNRWFDSLTLNFCFPKVVRRLLSYTTDLLRSLTQRIFCCTL
Sbjct: 1   MMESSTLFKLGNGSSFTVWSNRWFDSLTLNFCFPKVVRRLLSYTTDLLRSLTQRIFCCTL 60

Query: 61  GPFLFCLVLIYLWVGGFFIHCNMALIYLGSLCKEGAETIFEIFCQRLRLRSFGLGIIKGY 120
           GPFLFCLVLIYLWVGGFFIHCNMALIYLGSLCKEGAETIFEIFCQRLRLRSFGLGIIKGY
Sbjct: 61  GPFLFCLVLIYLWVGGFFIHCNMALIYLGSLCKEGAETIFEIFCQRLRLRSFGLGIIKGY 120

Query: 121 FMSKETGWLDCFDIDNRNTAAGASYARNLKPFLCRTLFELACHA 165
           FMSKETGWLDCFDIDNRNTAAGASYARNLKPFLCRTLFELACHA
Sbjct: 121 FMSKETGWLDCFDIDNRNTAAGASYARNLKPFLCRTLFELACHA 164

[Close]
BLAST of Csa7G184150 vs. NCBI nr
Match: gi|700188860|gb|KGN44093.1| (hypothetical protein Csa_7G184150 [Cucumis sativus])

HSP 1 Score: 346.7 bits (888), Expect = 2.3e-92
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

Query: 1   MMESSTLFKLGNGSSFTVWSNRWFDSLTLNFCFPKVVRRLLSYTTDLLRSLTQRIFCCTL 60
           MMESSTLFKLGNGSSFTVWSNRWFDSLTLNFCFPKVVRRLLSYTTDLLRSLTQRIFCCTL
Sbjct: 1   MMESSTLFKLGNGSSFTVWSNRWFDSLTLNFCFPKVVRRLLSYTTDLLRSLTQRIFCCTL 60

Query: 61  GPFLFCLVLIYLWVGGFFIHCNMALIYLGSLCKEGAETIFEIFCQRLRLRSFGLGIIKGY 120
           GPFLFCLVLIYLWVGGFFIHCNMALIYLGSLCKEGAETIFEIFCQRLRLRSFGLGIIKGY
Sbjct: 61  GPFLFCLVLIYLWVGGFFIHCNMALIYLGSLCKEGAETIFEIFCQRLRLRSFGLGIIKGY 120

Query: 121 FMSKETGWLDCFDIDNRNTAAGASYARNLKPFLCRTLFELACHA 165
           FMSKETGWLDCFDIDNRNTAAGASYARNLKPFLCRTLFELACHA
Sbjct: 121 FMSKETGWLDCFDIDNRNTAAGASYARNLKPFLCRTLFELACHA 164

The following BLAST results are available for this feature:
BLAST of Csa7G184150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3L7_CUCSA1.6e-92100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G184150 PE=4 SV=1[more]
BLAST of Csa7G184150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188860|gb|KGN44093.1|2.3e-92100.00hypothetical protein Csa_7G184150 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU139963cucumber EST collection version 3.0transcribed_cluster
CU168306cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G184150.1Csa7G184150.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU168306CU168306transcribed_cluster
CU139963CU139963transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G184150Cucurbita maxima (Rimu)cmacuB044
Csa7G184150Cucurbita moschata (Rifu)cmocuB033
Csa7G184150Melon (DHL92) v3.5.1cumeB534
Csa7G184150Watermelon (Charleston Gray)cuwcgB527
Csa7G184150Watermelon (97103) v1cuwmB569
Csa7G184150Cucurbita pepo (Zucchini)cpecuB802
Csa7G184150Bottle gourd (USVL1VR-Ls)culsiB504
Csa7G184150Cucumber (Gy14) v2cgybcuB323
Csa7G184150Melon (DHL92) v3.6.1cumedB513
Csa7G184150Silver-seed gourdcarcuB1046
Csa7G184150Watermelon (97103) v2cuwmbB573
Csa7G184150Wax gourdcuwgoB709