Csa7G169080 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G169080
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 6437996 .. 6438211 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGACGAAACGATGACGACGAGATGGTGGCCACAGACGAGGAGGAGACAAGATGGATGGATGGCTGGTGAAATGCTGGAAGGGGTGACGCTTAGCTCCAAAGGACGACACTTGGGCTTGGGTGAGGCGAACGGTGAGTCGTCGACGGTGGTCAACGAACGACGAACAAAGACGGAACAACTAGGGCGGCGACGGGTAGGGTTCTTTGAATGA

mRNA sequence

ATGGTTGACGAAACGATGACGACGAGATGGTGGCCACAGACGAGGAGGAGACAAGATGGATGGATGGCTGGTGAAATGCTGGAAGGGGTGACGCTTAGCTCCAAAGGACGACACTTGGGCTTGGGTGAGGCGAACGGTGAGTCGTCGACGGTGGTCAACGAACGACGAACAAAGACGGAACAACTAGGGCGGCGACGGGTAGGGTTCTTTGAATGA

Coding sequence (CDS)

ATGGTTGACGAAACGATGACGACGAGATGGTGGCCACAGACGAGGAGGAGACAAGATGGATGGATGGCTGGTGAAATGCTGGAAGGGGTGACGCTTAGCTCCAAAGGACGACACTTGGGCTTGGGTGAGGCGAACGGTGAGTCGTCGACGGTGGTCAACGAACGACGAACAAAGACGGAACAACTAGGGCGGCGACGGGTAGGGTTCTTTGAATGA

Protein sequence

MVDETMTTRWWPQTRRRQDGWMAGEMLEGVTLSSKGRHLGLGEANGESSTVVNERRTKTEQLGRRRVGFFE*
Homology
[Close]
BLAST of Csa7G169080 vs. TrEMBL
Match: A0A0A0K8G3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G169080 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.2e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1  MVDETMTTRWWPQTRRRQDGWMAGEMLEGVTLSSKGRHLGLGEANGESSTVVNERRTKTE 60
          MVDETMTTRWWPQTRRRQDGWMAGEMLEGVTLSSKGRHLGLGEANGESSTVVNERRTKTE
Sbjct: 1  MVDETMTTRWWPQTRRRQDGWMAGEMLEGVTLSSKGRHLGLGEANGESSTVVNERRTKTE 60

Query: 61 QLGRRRVGFFE 72
          QLGRRRVGFFE
Sbjct: 61 QLGRRRVGFFE 71

[Close]
BLAST of Csa7G169080 vs. NCBI nr
Match: gi|700188843|gb|KGN44076.1| (hypothetical protein Csa_7G169080 [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1  MVDETMTTRWWPQTRRRQDGWMAGEMLEGVTLSSKGRHLGLGEANGESSTVVNERRTKTE 60
          MVDETMTTRWWPQTRRRQDGWMAGEMLEGVTLSSKGRHLGLGEANGESSTVVNERRTKTE
Sbjct: 1  MVDETMTTRWWPQTRRRQDGWMAGEMLEGVTLSSKGRHLGLGEANGESSTVVNERRTKTE 60

Query: 61 QLGRRRVGFFE 72
          QLGRRRVGFFE
Sbjct: 61 QLGRRRVGFFE 71

The following BLAST results are available for this feature:
BLAST of Csa7G169080 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8G3_CUCSA1.2e-33100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G169080 PE=4 SV=1[more]
BLAST of Csa7G169080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188843|gb|KGN44076.1|1.8e-33100.00hypothetical protein Csa_7G169080 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G169080.1Csa7G169080.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G169080CSPI07G08890Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G169080Cucumber (Gy14) v2cgybcuB323