Csa7G075560 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G075560
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 5217293 .. 5217644 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAGATTTAGATTACAAAATGACTCTAAGTTAGTGTTGGCATCAACAGCAGGGTCGTCACCAAACAATAAACCGATCAATTAGCAAGAAAATGGTGGATTCCGAAAGAATCACCTCCTTGGGGCTGCTGGGTTCATCAATTGCAATTGCTTTGTTCTGTTTGGTAGGGTCCTGGATGGATATCTGGCGGCGATCTGTGGTTGTGATTGTGGGCAAGAAGCGGCTAGAAGAATTAGATAGAAATACATCTCGGAATTTGGCGAGCTGGTTCATGCACATCTCTACGGTGGGCGAAATCTTCATAAAAAGTGAGATTGGGAAAGAGAAGAAGAAGAAGGAAATAAAGTTATGA

mRNA sequence

ATGGTGGATTCCGAAAGAATCACCTCCTTGGGGCTGCTGGGTTCATCAATTGCAATTGCTTTGTTCTGTTTGGTAGGGTCCTGGATGGATATCTGGCGGCGATCTGTGGTTGTGATTGTGGGCAAGAAGCGGCTAGAAGAATTAGATAGAAATACATCTCGGAATTTGGCGAGCTGGTTCATGCACATCTCTACGGTGGGCGAAATCTTCATAAAAAGTGAGATTGGGAAAGAGAAGAAGAAGAAGGAAATAAAGTTATGA

Coding sequence (CDS)

ATGGTGGATTCCGAAAGAATCACCTCCTTGGGGCTGCTGGGTTCATCAATTGCAATTGCTTTGTTCTGTTTGGTAGGGTCCTGGATGGATATCTGGCGGCGATCTGTGGTTGTGATTGTGGGCAAGAAGCGGCTAGAAGAATTAGATAGAAATACATCTCGGAATTTGGCGAGCTGGTTCATGCACATCTCTACGGTGGGCGAAATCTTCATAAAAAGTGAGATTGGGAAAGAGAAGAAGAAGAAGGAAATAAAGTTATGA

Protein sequence

MVDSERITSLGLLGSSIAIALFCLVGSWMDIWRRSVVVIVGKKRLEELDRNTSRNLASWFMHISTVGEIFIKSEIGKEKKKKEIKL*
Homology
[Close]
BLAST of Csa7G075560 vs. TrEMBL
Match: A0A0A0K2U2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G075560 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.1e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1 

Query: 1  MVDSERITSLGLLGSSIAIALFCLVGSWMDIWRRSVVVIVGKKRLEELDRNTSRNLASWF 60
          MVDSERITSLGLLGSSIAIALFCLVGSWMDIWRRSVVVIVGKKRLEELDRNTSRNLASWF
Sbjct: 1  MVDSERITSLGLLGSSIAIALFCLVGSWMDIWRRSVVVIVGKKRLEELDRNTSRNLASWF 60

Query: 61 MHISTVGEIFIKSEIGKEKKKKEIKL 87
          MHISTVGEIFIKSEIGKEKKKKEIKL
Sbjct: 61 MHISTVGEIFIKSEIGKEKKKKEIKL 86

[Close]
BLAST of Csa7G075560 vs. NCBI nr
Match: gi|700188742|gb|KGN43975.1| (hypothetical protein Csa_7G075560 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 1.5e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1 

Query: 1  MVDSERITSLGLLGSSIAIALFCLVGSWMDIWRRSVVVIVGKKRLEELDRNTSRNLASWF 60
          MVDSERITSLGLLGSSIAIALFCLVGSWMDIWRRSVVVIVGKKRLEELDRNTSRNLASWF
Sbjct: 1  MVDSERITSLGLLGSSIAIALFCLVGSWMDIWRRSVVVIVGKKRLEELDRNTSRNLASWF 60

Query: 61 MHISTVGEIFIKSEIGKEKKKKEIKL 87
          MHISTVGEIFIKSEIGKEKKKKEIKL
Sbjct: 61 MHISTVGEIFIKSEIGKEKKKKEIKL 86

The following BLAST results are available for this feature:
BLAST of Csa7G075560 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2U2_CUCSA1.1e-39100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G075560 PE=4 SV=1[more]
BLAST of Csa7G075560 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188742|gb|KGN43975.1|1.5e-39100.00hypothetical protein Csa_7G075560 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU084675cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G075560.1Csa7G075560.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU084675CU084675transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G075560CSPI07G08030Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G075560Watermelon (97103) v1cuwmB576
Csa7G075560Watermelon (97103) v1cuwmB605
Csa7G075560Cucurbita pepo (Zucchini)cpecuB258
Csa7G075560Cucurbita pepo (Zucchini)cpecuB695
Csa7G075560Bottle gourd (USVL1VR-Ls)culsiB492
Csa7G075560Bottle gourd (USVL1VR-Ls)culsiB495
Csa7G075560Bottle gourd (USVL1VR-Ls)culsiB537
Csa7G075560Cucumber (Gy14) v2cgybcuB087
Csa7G075560Cucumber (Gy14) v2cgybcuB091
Csa7G075560Cucumber (Gy14) v2cgybcuB324
Csa7G075560Melon (DHL92) v3.6.1cumedB509
Csa7G075560Melon (DHL92) v3.6.1cumedB526
Csa7G075560Silver-seed gourdcarcuB0233
Csa7G075560Silver-seed gourdcarcuB0827
Csa7G075560Watermelon (97103) v2cuwmbB530
Csa7G075560Watermelon (97103) v2cuwmbB554
Csa7G075560Watermelon (97103) v2cuwmbB569
Csa7G075560Wax gourdcuwgoB663
Csa7G075560Cucumber (Chinese Long) v2cucuB079
Csa7G075560Cucumber (Chinese Long) v2cucuB083
Csa7G075560Cucumber (Gy14) v1cgycuB322
Csa7G075560Cucurbita maxima (Rimu)cmacuB146
Csa7G075560Cucurbita maxima (Rimu)cmacuB528
Csa7G075560Cucurbita moschata (Rifu)cmocuB137
Csa7G075560Cucurbita moschata (Rifu)cmocuB519
Csa7G075560Melon (DHL92) v3.5.1cumeB530
Csa7G075560Melon (DHL92) v3.5.1cumeB549
Csa7G075560Watermelon (Charleston Gray)cuwcgB538
Csa7G075560Watermelon (Charleston Gray)cuwcgB547
Csa7G075560Watermelon (Charleston Gray)cuwcgB568