Csa7G074290 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G074290
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 5060149 .. 5060729 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAAAGAGAATGCTGGGAAGGACAAAGAACGAAAGGAATTGAGCCAGATTGAGGCAGTAAGCGAATAAACTCTCTATTCTTTCTATCTTTGTTGATGCCTAAGCATAGTACATCTCATGTCAGCTTTATTGTAGATAGGTATTGGGTTAAAGACATGATAAAGTTAAAATTATAATCAAAGTTATGAGATCTCATGTCAACTTTATTGCAGATAGGGATTGGGTTATAGACATAAAGTTAAATTATAACCATACTCAAGACTTAGCTATACAATCAAAGAAATAGATATTGTCATTGTATCGGAAATATTTGAATGACATTTTCGCCAAAATCAACATTTTAAATCTCGGATTCAACAAATACTTTAGCAAATAATATAAACACAAAAATAGAAGTGGGAATCTGATTTTAATTATTGTTCATAATTGCACTTATTTTCTTTATGTTGATAATTCTTATTTTTTATATGCTAACAATTAACTAGAAGCAAGTGGCTGCTGGCCAATGGCCTTCATCGGATAATTATCTGTCGAGGACCTCACCGGTACCGCCATCAAGCAATGGAGTATCAAGTTGA

mRNA sequence

ATGAGAAAAGAGAATGCTGGGAAGGACAAAGAACGAAAGGAATTGAGCCAGATTGAGGCAAAGCAAGTGGCTGCTGGCCAATGGCCTTCATCGGATAATTATCTGTCGAGGACCTCACCGGTACCGCCATCAAGCAATGGAGTATCAAGTTGA

Coding sequence (CDS)

ATGAGAAAAGAGAATGCTGGGAAGGACAAAGAACGAAAGGAATTGAGCCAGATTGAGGCAAAGCAAGTGGCTGCTGGCCAATGGCCTTCATCGGATAATTATCTGTCGAGGACCTCACCGGTACCGCCATCAAGCAATGGAGTATCAAGTTGA

Protein sequence

MRKENAGKDKERKELSQIEAKQVAAGQWPSSDNYLSRTSPVPPSSNGVSS*
Homology
[Close]
BLAST of Csa7G074290 vs. TrEMBL
Match: A0A0A0K2Q0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074290 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-19
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 1 

Query: 1  MRKENAGKDKERKELSQIEAKQVAAGQWPSSDNYLSRTSPVPPSSNGVSS 51
          MRKENAGKDKERKELSQIEAKQVAAGQWPSSDNYLSRTSPVPPSSNGVSS
Sbjct: 1  MRKENAGKDKERKELSQIEAKQVAAGQWPSSDNYLSRTSPVPPSSNGVSS 50

[Close]
BLAST of Csa7G074290 vs. NCBI nr
Match: gi|700188712|gb|KGN43945.1| (hypothetical protein Csa_7G074290 [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 1.8e-19
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 1 

Query: 1  MRKENAGKDKERKELSQIEAKQVAAGQWPSSDNYLSRTSPVPPSSNGVSS 51
          MRKENAGKDKERKELSQIEAKQVAAGQWPSSDNYLSRTSPVPPSSNGVSS
Sbjct: 1  MRKENAGKDKERKELSQIEAKQVAAGQWPSSDNYLSRTSPVPPSSNGVSS 50

The following BLAST results are available for this feature:
BLAST of Csa7G074290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2Q0_CUCSA1.2e-19100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074290 PE=4 SV=1[more]
BLAST of Csa7G074290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188712|gb|KGN43945.1|1.8e-19100.00hypothetical protein Csa_7G074290 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU108368cucumber EST collection version 3.0transcribed_cluster
CU137955cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G074290.1Csa7G074290.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU108368CU108368transcribed_cluster
CU137955CU137955transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 1..21
scor

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G074290Watermelon (97103) v2cuwmbB516
Csa7G074290Watermelon (97103) v2cuwmbB530
Csa7G074290Watermelon (97103) v2cuwmbB554
Csa7G074290Watermelon (97103) v2cuwmbB569
Csa7G074290Wax gourdcuwgoB663
Csa7G074290Wax gourdcuwgoB686
Csa7G074290Cucumber (Chinese Long) v2cucuB079
Csa7G074290Cucumber (Chinese Long) v2cucuB083
Csa7G074290Cucumber (Gy14) v1cgycuB322
Csa7G074290Cucurbita maxima (Rimu)cmacuB146
Csa7G074290Cucurbita maxima (Rimu)cmacuB528
Csa7G074290Cucurbita moschata (Rifu)cmocuB137
Csa7G074290Cucurbita moschata (Rifu)cmocuB519
Csa7G074290Melon (DHL92) v3.5.1cumeB530
Csa7G074290Melon (DHL92) v3.5.1cumeB549
Csa7G074290Watermelon (Charleston Gray)cuwcgB538
Csa7G074290Watermelon (Charleston Gray)cuwcgB547
Csa7G074290Watermelon (Charleston Gray)cuwcgB568
Csa7G074290Watermelon (97103) v1cuwmB576
Csa7G074290Watermelon (97103) v1cuwmB595
Csa7G074290Watermelon (97103) v1cuwmB605
Csa7G074290Cucurbita pepo (Zucchini)cpecuB258
Csa7G074290Cucurbita pepo (Zucchini)cpecuB695
Csa7G074290Bottle gourd (USVL1VR-Ls)culsiB492
Csa7G074290Bottle gourd (USVL1VR-Ls)culsiB495
Csa7G074290Bottle gourd (USVL1VR-Ls)culsiB537
Csa7G074290Cucumber (Gy14) v2cgybcuB087
Csa7G074290Cucumber (Gy14) v2cgybcuB091
Csa7G074290Cucumber (Gy14) v2cgybcuB324
Csa7G074290Melon (DHL92) v3.6.1cumedB509
Csa7G074290Melon (DHL92) v3.6.1cumedB526
Csa7G074290Silver-seed gourdcarcuB0233
Csa7G074290Silver-seed gourdcarcuB0827