Csa7G067560 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G067560
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRING finger protein; contains IPR011016 (Zinc finger, RING-CH-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type)
LocationChr7 : 4199434 .. 4200237 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGAACAAATCTTTGGTCCTTGCAGATATGGTTCTGGTTCCTATATAGGTATGTCACTAAGAATTACTGATCCTGACCTAAGGCATCAACCACAAAGCCAAATTCGAACGCCACCCAACTCGCCAACACTTGTCAAACAAATCGATCTGAATTTCAAAGTTGAAGTAAAATGCCAACACTACTTTCAAGCAGGTGAAGGAGGCAACAGTACATTTGCAACAGCTTTACTTAGTGAACACATAAGTTCACATCATCCCTTGCCAACTTTGCAACTTCCTGTCTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCGGTTACTTTTTCGGGAGTTTCAAATTTATAGAGCCATCATCAACATTGAACTTGTGGTTGACGAAATAATAAAACATTGGGTTAAAAAAGTAGATGAAGAGAATAGTACTTCTCAGGTGTTTGAAGAGATTTATCCTCTCGAAATTACGATAGAGTTGTTGGTTTATCAAATGATTCATGCAATAGACCAACCACATGAAATTATGATGGATCAACCACAAGTGATGATGGTTCCAACAAGCGAGAGTGCTATGGAGAGTATGCTGAAGAAAGTGGAAAACGAAGAAATAGTGAAATTTGGCGACAACAAAAGCATTAATTGTGTTATCTGTTTGGAAGAGATTAGTAAAGAGAAGAAAGGAAGTGAGGCAGTGGTGTTACAGATGCCATGCTTGCATATGTTTCATGAAGAATGCATAAGGAAGTGGTTGAAGAGAAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAACAATTGA

mRNA sequence

ATGGCCGAACAAATCTTTGGTCCTTGCAGATATGGTTCTGGTTCCTATATAGGTATGTCACTAAGAATTACTGATCCTGACCTAAGGCATCAACCACAAAGCCAAATTCGAACGCCACCCAACTCGCCAACACTTGTCAAACAAATCGATCTGAATTTCAAAGTTGAAGTAAAATGCCAACACTACTTTCAAGCAGGTGAAGGAGGCAACAGTACATTTGCAACAGCTTTACTTAGTGAACACATAAGTTCACATCATCCCTTGCCAACTTTGCAACTTCCTGTCTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCGGTTACTTTTTCGGGAGTTTCAAATTTATAGAGCCATCATCAACATTGAACTTGTGGTTGACGAAATAATAAAACATTGGGTTAAAAAAGTAGATGAAGAGAATAGTACTTCTCAGGTGTTTGAAGAGATTTATCCTCTCGAAATTACGATAGAGTTGTTGGTTTATCAAATGATTCATGCAATAGACCAACCACATGAAATTATGATGGATCAACCACAAGTGATGATGGTTCCAACAAGCGAGAGTGCTATGGAGAGTATGCTGAAGAAAGTGGAAAACGAAGAAATAGTGAAATTTGGCGACAACAAAAGCATTAATTGTGTTATCTGTTTGGAAGAGATTAGTAAAGAGAAGAAAGGAAGTGAGGCAGTGGTGTTACAGATGCCATGCTTGCATATGTTTCATGAAGAATGCATAAGGAAGTGGTTGAAGAGAAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAACAATTGA

Coding sequence (CDS)

ATGGCCGAACAAATCTTTGGTCCTTGCAGATATGGTTCTGGTTCCTATATAGGTATGTCACTAAGAATTACTGATCCTGACCTAAGGCATCAACCACAAAGCCAAATTCGAACGCCACCCAACTCGCCAACACTTGTCAAACAAATCGATCTGAATTTCAAAGTTGAAGTAAAATGCCAACACTACTTTCAAGCAGGTGAAGGAGGCAACAGTACATTTGCAACAGCTTTACTTAGTGAACACATAAGTTCACATCATCCCTTGCCAACTTTGCAACTTCCTGTCTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCGGTTACTTTTTCGGGAGTTTCAAATTTATAGAGCCATCATCAACATTGAACTTGTGGTTGACGAAATAATAAAACATTGGGTTAAAAAAGTAGATGAAGAGAATAGTACTTCTCAGGTGTTTGAAGAGATTTATCCTCTCGAAATTACGATAGAGTTGTTGGTTTATCAAATGATTCATGCAATAGACCAACCACATGAAATTATGATGGATCAACCACAAGTGATGATGGTTCCAACAAGCGAGAGTGCTATGGAGAGTATGCTGAAGAAAGTGGAAAACGAAGAAATAGTGAAATTTGGCGACAACAAAAGCATTAATTGTGTTATCTGTTTGGAAGAGATTAGTAAAGAGAAGAAAGGAAGTGAGGCAGTGGTGTTACAGATGCCATGCTTGCATATGTTTCATGAAGAATGCATAAGGAAGTGGTTGAAGAGAAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAACAATTGA

Protein sequence

MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN*
Homology
[Close]
BLAST of Csa7G067560 vs. Swiss-Prot
Match: HRD1_CAEBR (E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis briggsae GN=sel-11 PE=3 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 4.3e-08
Identity = 32/99 (32.32%), Postives = 48/99 (48.48%), Query Frame = 1 

Query: 162 YQMIHAIDQPHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEI 221
           YQ + A+   H+  +D   V++   + +AM S    V N+E+          C+IC EE+
Sbjct: 250 YQSVRAL---HKAFLD---VILSRRAINAMNSQFPVVSNDELSAM----DATCIICREEM 309

Query: 222 SKEKKGSEAVVLQMPCLHMFHEECIRKWLKRSHYCPTCR 261
           + E         ++PC H+FH  C+R W +R   CPTCR
Sbjct: 310 TVESSPK-----RLPCSHVFHAHCLRSWFQRQQTCPTCR 333

[Close]
BLAST of Csa7G067560 vs. Swiss-Prot
Match: RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.7e-08
Identity = 27/93 (29.03%), Postives = 47/93 (50.54%), Query Frame = 1 

Query: 175 MMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQ 234
           ++D    +  P +++ +ES+ + V             + C +CL E  +E+      V++
Sbjct: 55  LVDWEHHLPPPAAKAVVESLPRTVIRSS------KAELKCPVCLLEFEEEE-----TVIE 114

Query: 235 MPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 268
           MPC H+FH  CI  WL +++ CP CR  +PT++
Sbjct: 115 MPCHHLFHSNCILPWLSKTNSCPLCRHELPTDD 136

[Close]
BLAST of Csa7G067560 vs. Swiss-Prot
Match: RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.7e-08
Identity = 27/93 (29.03%), Postives = 47/93 (50.54%), Query Frame = 1 

Query: 175 MMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQ 234
           ++D    +  P +++ +ES+ + V +           + C +CL E   E+      V++
Sbjct: 55  LVDWEHHLPPPAAKAVVESLPRTVISSA------KADLKCPVCLLEFEAEE-----TVIE 114

Query: 235 MPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 268
           MPC H+FH  CI  WL +++ CP CR  +PT++
Sbjct: 115 MPCHHLFHSNCILPWLSKTNSCPLCRHELPTDD 136

[Close]
BLAST of Csa7G067560 vs. Swiss-Prot
Match: RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07
Identity = 29/81 (35.80%), Postives = 40/81 (49.38%), Query Frame = 1 

Query: 185 PTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEE 244
           P S+SA+ES+ +     EI         NC +C E        +E    +MPC H+FH++
Sbjct: 174 PASKSAIESLPRV----EISDCHIGSEANCAVCTEIFE-----TETEAREMPCKHLFHDD 233

Query: 245 CIRKWLKRSHYCPTCRFSMPT 266
           CI  WL   + CP CRF +P+
Sbjct: 234 CIVPWLSIRNSCPVCRFELPS 245

[Close]
BLAST of Csa7G067560 vs. Swiss-Prot
Match: RN181_DROME (E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster GN=CG7694 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-07
Identity = 28/86 (32.56%), Postives = 46/86 (53.49%), Query Frame = 1 

Query: 182 MMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMF 241
           M +   E++  ++L+ +   EIVK  +   + C +C E   + +K        +PC H F
Sbjct: 39  MEIEVPEASKRAILE-LPVHEIVKSDEGGDLECSVCKEPAEEGQK-----YRILPCKHEF 98

Query: 242 HEECIRKWLKRSHYCPTCRFSMPTNN 268
           HEECI  WLK+++ CP CR+ + T++
Sbjct: 99  HEECILLWLKKTNSCPLCRYELETDD 118

[Close]
BLAST of Csa7G067560 vs. TrEMBL
Match: A0A0A0K7L0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 5.9e-153
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII
Sbjct: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120

Query: 121 NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ 180
           NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ
Sbjct: 121 NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ 180

Query: 181 VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM 240
           VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM
Sbjct: 181 VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM 240

Query: 241 FHEECIRKWLKRSHYCPTCRFSMPTNN 268
           FHEECIRKWLKRSHYCPTCRFSMPTNN
Sbjct: 241 FHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]
BLAST of Csa7G067560 vs. TrEMBL
Match: A0A0A0K493_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067540 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 3.8e-104
Identity = 196/268 (73.13%), Postives = 223/268 (83.21%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAE  F  C   +G ++GMSLRITDPDL  QPQSQ +TP NSPT VKQI+L  KVEVKCQ
Sbjct: 1   MAEHNFDDCM-STGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQA E G+ TFA+ L+ EHI SHHP PT QLPVS+F+HG++TLKRLLF++FQI+R II
Sbjct: 61  H-FQADEEGD-TFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGII 120

Query: 121 NIELVVDEIIKHWVKKV-DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180
           NI+LV DEII+HWVKK  D EN++  + EEIYPLEITIELL+ +MIHAIDQP E + DQP
Sbjct: 121 NIQLVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETI-DQP 180

Query: 181 QVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLH 240
           QV MVP SESAMESMLK+VE EEIVK G++KSINCVICLEEISK+ KGSE VVLQMPCLH
Sbjct: 181 QVTMVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLH 240

Query: 241 MFHEECIRKWLKRSHYCPTCRFSMPTNN 268
           MFHEECIR WLK SHYCPTCRFSMP NN
Sbjct: 241 MFHEECIRTWLKTSHYCPTCRFSMPINN 264

[Close]
BLAST of Csa7G067560 vs. TrEMBL
Match: A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.2e-102
Identity = 200/268 (74.63%), Postives = 223/268 (83.21%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAEQ F  C   SG Y+GMSLRITDP         I+T  NSPT VKQIDLNFKVEVKCQ
Sbjct: 1   MAEQNFDDCT--SGYYMGMSLRITDP---------IQTRSNSPTSVKQIDLNFKVEVKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQAGE  ++TFAT  LSEHI +H P P LQLPVSIFKHGDKTLKRLLF++FQ++RAII
Sbjct: 61  H-FQAGEE-DTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAII 120

Query: 121 NIELVVDEIIKHWVKKV-DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180
           NIELV D+IIKHWVKKV D++ + S VFEEIYPLEITIE+LV QMI A+DQP E + DQP
Sbjct: 121 NIELVTDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETI-DQP 180

Query: 181 QVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLH 240
           QV MVPTS+SAM+SMLK+VENEEI+K GD KSI+CVICLE+ISKE+KGSE VVLQMPCLH
Sbjct: 181 QVRMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLH 240

Query: 241 MFHEECIRKWLKRSHYCPTCRFSMPTNN 268
           MFHEECIRKWLK SHYCPTCRFSM  NN
Sbjct: 241 MFHEECIRKWLKTSHYCPTCRFSMTINN 254

[Close]
BLAST of Csa7G067560 vs. TrEMBL
Match: E5GCQ3_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.4e-98
Identity = 187/271 (69.00%), Postives = 224/271 (82.66%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAE+IF  CRYGSGSY+GMSLRITDP+ RHQP +QI    +SPTLV+QI L FKV++KCQ
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQ  EGGN   +T L+ EHI S H   T QLP+SIFKHGDKTLKR+LFREF++Y  II
Sbjct: 61  H-FQVWEGGNG-HSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDII 120

Query: 121 NIELVVDEIIKHWVKKV----DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMM 180
           NIEL+ +EIIKHWV+KV    D+EN+++ +F++IYPLEI I LLV +MI A+ QP   M+
Sbjct: 121 NIELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAV-QPRLAMI 180

Query: 181 DQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMP 240
           DQP  +MVPTS+SA+ESMLK+VENEEI+K GD++SINCV+CLEEISKE+KGSE  VLQMP
Sbjct: 181 DQP--LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMP 240

Query: 241 CLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 268
           CLHMFHEECIRKWLK SHYCPTCRFSMP +N
Sbjct: 241 CLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]
BLAST of Csa7G067560 vs. TrEMBL
Match: E5GCQ4_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 3.9e-96
Identity = 193/271 (71.22%), Postives = 223/271 (82.29%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRH-QPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60
           MAEQ    C   +G Y+GMSLRITDPDLRH QPQSQI+T PNSP LVKQIDLNFK++VKC
Sbjct: 1   MAEQNLDACM-SAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKC 60

Query: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120
           QH F AGE G STFAT LLSEHI S    P LQLP+SIFK GDKTLKRLLF++FQ++R I
Sbjct: 61  QH-FGAGEEG-STFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGI 120

Query: 121 INIELVVDEIIKHWVKKVDEEN-STSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQ 180
           +N+ELVVDEIIKHW++KV+E+  + S+VF EIYPLEI IELLV +MI AI       +DQ
Sbjct: 121 VNVELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAI-------IDQ 180

Query: 181 PQ-VMMVPTSESAMESMLKKVE-NEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMP 240
           PQ VMMVPTS++AMESMLK+VE NEE++K GD+ SI+CVICLE+I KE+K S  VVLQMP
Sbjct: 181 PQEVMMVPTSDNAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMP 240

Query: 241 CLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 268
           CLHMFHEECIRKWLK SH+CPTCRFSMP NN
Sbjct: 241 CLHMFHEECIRKWLKTSHFCPTCRFSMPINN 260

[Close]
BLAST of Csa7G067560 vs. TAIR10
Match: AT1G14200.1 (AT1G14200.1 RING/U-box superfamily protein)

HSP 1 Score: 65.5 bits (158), Expect = 5.8e-11
Identity = 41/127 (32.28%), Postives = 58/127 (45.67%), Query Frame = 1 

Query: 138 DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPTSESAMESMLKK 197
           D++ ST Q      PL        + MI +     +   D  +    P  +S +E+M + 
Sbjct: 42  DDQGSTDQTTRRGDPLSPR-----FVMIGSRSGLDDFFSDGGKQGRSPALKSEVENMPRV 101

Query: 198 VENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRKWLKRSHYCP 257
           V  E+  K+G +    C ICL+E SK       V  +MPC H FH +C+ +WL R   CP
Sbjct: 102 VIGEDKEKYGGS----CAICLDEWSKGD-----VAAEMPCKHKFHSKCVEEWLGRHATCP 154

Query: 258 TCRFSMP 265
            CR+ MP
Sbjct: 162 MCRYEMP 154

[Close]
BLAST of Csa7G067560 vs. TAIR10
Match: AT1G18770.1 (AT1G18770.1 RING/U-box superfamily protein)

HSP 1 Score: 62.4 bits (150), Expect = 4.9e-10
Identity = 28/80 (35.00%), Postives = 44/80 (55.00%), Query Frame = 1 

Query: 185 PTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEE 244
           P S+  ++S+ +K+        G+     C+ICLEE S+ ++     V+ +PC H F +E
Sbjct: 34  PASKLVVKSLARKIYKMTTSSTGEM----CIICLEEFSEGRR-----VVTLPCGHDFDDE 93

Query: 245 CIRKWLKRSHYCPTCRFSMP 265
           C+ KW + +H CP CRF +P
Sbjct: 94  CVLKWFETNHSCPLCRFKLP 104

[Close]
BLAST of Csa7G067560 vs. TAIR10
Match: AT5G37250.1 (AT5G37250.1 RING/U-box superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09
Identity = 28/93 (30.11%), Postives = 44/93 (47.31%), Query Frame = 1 

Query: 168 IDQPHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKG 227
           ++   ++M     V    T +  +E      +  E+   GD +   C ICLE+ S+    
Sbjct: 96  VEVTRDVMFSSIAVRSTDTFQRLLEE-----QTMELTDLGDEEETTCSICLEDFSESH-- 155

Query: 228 SEAVVLQMPCLHMFHEECIRKWLKRSHYCPTCR 261
            + ++L   C H+FH+ CI +WLKR   CP CR
Sbjct: 156 DDNIILLPDCFHLFHQNCIFEWLKRQRSCPLCR 181

[Close]
BLAST of Csa7G067560 vs. TAIR10
Match: AT5G59550.1 (AT5G59550.1 zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 58.5 bits (140), Expect = 7.1e-09
Identity = 29/81 (35.80%), Postives = 40/81 (49.38%), Query Frame = 1 

Query: 185 PTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEE 244
           P S+SA+ES+ +     EI         NC +C E        +E    +MPC H+FH++
Sbjct: 174 PASKSAIESLPRV----EISDCHIGSEANCAVCTEIFE-----TETEAREMPCKHLFHDD 233

Query: 245 CIRKWLKRSHYCPTCRFSMPT 266
           CI  WL   + CP CRF +P+
Sbjct: 234 CIVPWLSIRNSCPVCRFELPS 245

[Close]
BLAST of Csa7G067560 vs. TAIR10
Match: AT1G26800.1 (AT1G26800.1 RING/U-box superfamily protein)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08
Identity = 27/53 (50.94%), Postives = 28/53 (52.83%), Query Frame = 1 

Query: 214 CVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTN 267
           CVICLEE       SE  V +MPC H FH  CI KWL     CP CR+ MP +
Sbjct: 113 CVICLEEWK-----SEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]
BLAST of Csa7G067560 vs. NCBI nr
Match: gi|700188568|gb|KGN43801.1| (hypothetical protein Csa_7G067560 [Cucumis sativus])

HSP 1 Score: 548.1 bits (1411), Expect = 8.4e-153
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII
Sbjct: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120

Query: 121 NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ 180
           NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ
Sbjct: 121 NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ 180

Query: 181 VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM 240
           VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM
Sbjct: 181 VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM 240

Query: 241 FHEECIRKWLKRSHYCPTCRFSMPTNN 268
           FHEECIRKWLKRSHYCPTCRFSMPTNN
Sbjct: 241 FHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]
BLAST of Csa7G067560 vs. NCBI nr
Match: gi|778730182|ref|XP_011659721.1| (PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus])

HSP 1 Score: 386.0 bits (990), Expect = 5.5e-104
Identity = 196/268 (73.13%), Postives = 223/268 (83.21%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAE  F  C   +G ++GMSLRITDPDL  QPQSQ +TP NSPT VKQI+L  KVEVKCQ
Sbjct: 1   MAEHNFDDCM-STGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQA E G+ TFA+ L+ EHI SHHP PT QLPVS+F+HG++TLKRLLF++FQI+R II
Sbjct: 61  H-FQADEEGD-TFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGII 120

Query: 121 NIELVVDEIIKHWVKKV-DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180
           NI+LV DEII+HWVKK  D EN++  + EEIYPLEITIELL+ +MIHAIDQP E + DQP
Sbjct: 121 NIQLVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETI-DQP 180

Query: 181 QVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLH 240
           QV MVP SESAMESMLK+VE EEIVK G++KSINCVICLEEISK+ KGSE VVLQMPCLH
Sbjct: 181 QVTMVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLH 240

Query: 241 MFHEECIRKWLKRSHYCPTCRFSMPTNN 268
           MFHEECIR WLK SHYCPTCRFSMP NN
Sbjct: 241 MFHEECIRTWLKTSHYCPTCRFSMPINN 264

[Close]
BLAST of Csa7G067560 vs. NCBI nr
Match: gi|700188567|gb|KGN43800.1| (hypothetical protein Csa_7G067550 [Cucumis sativus])

HSP 1 Score: 380.9 bits (977), Expect = 1.8e-102
Identity = 200/268 (74.63%), Postives = 223/268 (83.21%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAEQ F  C   SG Y+GMSLRITDP         I+T  NSPT VKQIDLNFKVEVKCQ
Sbjct: 1   MAEQNFDDCT--SGYYMGMSLRITDP---------IQTRSNSPTSVKQIDLNFKVEVKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQAGE  ++TFAT  LSEHI +H P P LQLPVSIFKHGDKTLKRLLF++FQ++RAII
Sbjct: 61  H-FQAGEE-DTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAII 120

Query: 121 NIELVVDEIIKHWVKKV-DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180
           NIELV D+IIKHWVKKV D++ + S VFEEIYPLEITIE+LV QMI A+DQP E + DQP
Sbjct: 121 NIELVTDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETI-DQP 180

Query: 181 QVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLH 240
           QV MVPTS+SAM+SMLK+VENEEI+K GD KSI+CVICLE+ISKE+KGSE VVLQMPCLH
Sbjct: 181 QVRMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLH 240

Query: 241 MFHEECIRKWLKRSHYCPTCRFSMPTNN 268
           MFHEECIRKWLK SHYCPTCRFSM  NN
Sbjct: 241 MFHEECIRKWLKTSHYCPTCRFSMTINN 254

[Close]
BLAST of Csa7G067560 vs. NCBI nr
Match: gi|659111003|ref|XP_008455525.1| (PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo])

HSP 1 Score: 367.5 bits (942), Expect = 2.0e-98
Identity = 187/271 (69.00%), Postives = 224/271 (82.66%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAE+IF  CRYGSGSY+GMSLRITDP+ RHQP +QI    +SPTLV+QI L FKV++KCQ
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQ  EGGN   +T L+ EHI S H   T QLP+SIFKHGDKTLKR+LFREF++Y  II
Sbjct: 61  H-FQVWEGGNG-HSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDII 120

Query: 121 NIELVVDEIIKHWVKKV----DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMM 180
           NIEL+ +EIIKHWV+KV    D+EN+++ +F++IYPLEI I LLV +MI A+ QP   M+
Sbjct: 121 NIELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAV-QPRLAMI 180

Query: 181 DQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMP 240
           DQP  +MVPTS+SA+ESMLK+VENEEI+K GD++SINCV+CLEEISKE+KGSE  VLQMP
Sbjct: 181 DQP--LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMP 240

Query: 241 CLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 268
           CLHMFHEECIRKWLK SHYCPTCRFSMP +N
Sbjct: 241 CLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]
BLAST of Csa7G067560 vs. NCBI nr
Match: gi|659111005|ref|XP_008455526.1| (PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo])

HSP 1 Score: 359.4 bits (921), Expect = 5.5e-96
Identity = 193/271 (71.22%), Postives = 223/271 (82.29%), Query Frame = 1 

Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRH-QPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60
           MAEQ    C   +G Y+GMSLRITDPDLRH QPQSQI+T PNSP LVKQIDLNFK++VKC
Sbjct: 1   MAEQNLDACM-SAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKC 60

Query: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120
           QH F AGE G STFAT LLSEHI S    P LQLP+SIFK GDKTLKRLLF++FQ++R I
Sbjct: 61  QH-FGAGEEG-STFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGI 120

Query: 121 INIELVVDEIIKHWVKKVDEEN-STSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQ 180
           +N+ELVVDEIIKHW++KV+E+  + S+VF EIYPLEI IELLV +MI AI       +DQ
Sbjct: 121 VNVELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAI-------IDQ 180

Query: 181 PQ-VMMVPTSESAMESMLKKVE-NEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMP 240
           PQ VMMVPTS++AMESMLK+VE NEE++K GD+ SI+CVICLE+I KE+K S  VVLQMP
Sbjct: 181 PQEVMMVPTSDNAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMP 240

Query: 241 CLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 268
           CLHMFHEECIRKWLK SH+CPTCRFSMP NN
Sbjct: 241 CLHMFHEECIRKWLKTSHFCPTCRFSMPINN 260

The following BLAST results are available for this feature:
BLAST of Csa7G067560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HRD1_CAEBR4.3e-0832.32E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis briggsae GN=sel-11 PE=3 SV=2[more]
RN181_RAT5.7e-0829.03E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1[more]
RN181_MOUSE9.7e-0829.03E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1[more]
RDUF2_ARATH1.3e-0735.80E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1[more]
RN181_DROME1.7e-0732.56E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster GN=CG7694 ... [more]
BLAST of Csa7G067560 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7L0_CUCSA5.9e-153100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1[more]
A0A0A0K493_CUCSA3.8e-10473.13Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067540 PE=4 SV=1[more]
A0A0A0K2A1_CUCSA1.2e-10274.63Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1[more]
E5GCQ3_CUCME1.4e-9869.00Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GCQ4_CUCME3.9e-9671.22Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
BLAST of Csa7G067560 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G14200.15.8e-1132.28 RING/U-box superfamily protein[more]
AT1G18770.14.9e-1035.00 RING/U-box superfamily protein[more]
AT5G37250.11.4e-0930.11 RING/U-box superfamily protein[more]
AT5G59550.17.1e-0935.80 zinc finger (C3HC4-type RING finger) family protein[more]
AT1G26800.11.2e-0850.94 RING/U-box superfamily protein[more]
BLAST of Csa7G067560 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188568|gb|KGN43801.1|8.4e-153100.00hypothetical protein Csa_7G067560 [Cucumis sativus][more]
gi|778730182|ref|XP_011659721.1|5.5e-10473.13PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus][more]
gi|700188567|gb|KGN43800.1|1.8e-10274.63hypothetical protein Csa_7G067550 [Cucumis sativus][more]
gi|659111003|ref|XP_008455525.1|2.0e-9869.00PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo][more]
gi|659111005|ref|XP_008455526.1|5.5e-9671.22PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G067560.1Csa7G067560.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 213..260
score: 1.1
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 214..259
score: 2.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 214..260
score: 13
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 213..260
score: 0.
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 210..261
score: 1.0
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 147..267
score: 1.7
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 197..264
score: 2.04

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G067560Watermelon (97103) v2cuwmbB518
Csa7G067560Watermelon (97103) v2cuwmbB530
Csa7G067560Watermelon (97103) v2cuwmbB558
Csa7G067560Wax gourdcuwgoB651
Csa7G067560Wax gourdcuwgoB661
Csa7G067560Wax gourdcuwgoB674
Csa7G067560Cucumber (Gy14) v1cgycuB322
Csa7G067560Cucurbita maxima (Rimu)cmacuB146
Csa7G067560Cucurbita maxima (Rimu)cmacuB157
Csa7G067560Cucurbita maxima (Rimu)cmacuB528
Csa7G067560Cucurbita maxima (Rimu)cmacuB534
Csa7G067560Cucurbita moschata (Rifu)cmocuB135
Csa7G067560Cucurbita moschata (Rifu)cmocuB137
Csa7G067560Cucurbita moschata (Rifu)cmocuB519
Csa7G067560Cucurbita moschata (Rifu)cmocuB525
Csa7G067560Cucurbita moschata (Rifu)cmocuB770
Csa7G067560Melon (DHL92) v3.5.1cumeB530
Csa7G067560Melon (DHL92) v3.5.1cumeB562
Csa7G067560Watermelon (Charleston Gray)cuwcgB514
Csa7G067560Watermelon (Charleston Gray)cuwcgB532
Csa7G067560Watermelon (Charleston Gray)cuwcgB547
Csa7G067560Watermelon (97103) v1cuwmB556
Csa7G067560Watermelon (97103) v1cuwmB575
Csa7G067560Cucurbita pepo (Zucchini)cpecuB258
Csa7G067560Cucurbita pepo (Zucchini)cpecuB264
Csa7G067560Cucurbita pepo (Zucchini)cpecuB472
Csa7G067560Cucurbita pepo (Zucchini)cpecuB694
Csa7G067560Cucurbita pepo (Zucchini)cpecuB695
Csa7G067560Bottle gourd (USVL1VR-Ls)culsiB518
Csa7G067560Bottle gourd (USVL1VR-Ls)culsiB520
Csa7G067560Bottle gourd (USVL1VR-Ls)culsiB522
Csa7G067560Cucumber (Gy14) v2cgybcuB324
Csa7G067560Melon (DHL92) v3.6.1cumedB509
Csa7G067560Melon (DHL92) v3.6.1cumedB539
Csa7G067560Silver-seed gourdcarcuB0207
Csa7G067560Silver-seed gourdcarcuB0316
Csa7G067560Silver-seed gourdcarcuB0411
Csa7G067560Silver-seed gourdcarcuB0487
Csa7G067560Silver-seed gourdcarcuB0750
Csa7G067560Silver-seed gourdcarcuB0751