Csa7G066190 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G066190
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 3981917 .. 3982180 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGTTTTACTCTTCTCATTGCGTTTGTTGCAACATTGCTTCTTTCAAGCTTGAGTTCTTCTTCCTCTTCCTCCTCCTCCATTATCGTATCTCGTAAGCTCTTGGCTTCGGATTTTCCAGGGCTCCCGGATTTCAACGTGCCACCATTTTACCCTGAATTCAAATTGCCTCCTCCATTTTCATTTTTTGGCCCCAATACTCCTTCTTCCATCTTTCCCAACTTCCCATTTTTCTCTCCACCCACTAATCCTTCTCCTTGA

mRNA sequence

ATGGCTCGTTTTACTCTTCTCATTGCGTTTGTTGCAACATTGCTTCTTTCAAGCTTGAGTTCTTCTTCCTCTTCCTCCTCCTCCATTATCGTATCTCGTAAGCTCTTGGCTTCGGATTTTCCAGGGCTCCCGGATTTCAACGTGCCACCATTTTACCCTGAATTCAAATTGCCTCCTCCATTTTCATTTTTTGGCCCCAATACTCCTTCTTCCATCTTTCCCAACTTCCCATTTTTCTCTCCACCCACTAATCCTTCTCCTTGA

Coding sequence (CDS)

ATGGCTCGTTTTACTCTTCTCATTGCGTTTGTTGCAACATTGCTTCTTTCAAGCTTGAGTTCTTCTTCCTCTTCCTCCTCCTCCATTATCGTATCTCGTAAGCTCTTGGCTTCGGATTTTCCAGGGCTCCCGGATTTCAACGTGCCACCATTTTACCCTGAATTCAAATTGCCTCCTCCATTTTCATTTTTTGGCCCCAATACTCCTTCTTCCATCTTTCCCAACTTCCCATTTTTCTCTCCACCCACTAATCCTTCTCCTTGA

Protein sequence

MARFTLLIAFVATLLLSSLSSSSSSSSSIIVSRKLLASDFPGLPDFNVPPFYPEFKLPPPFSFFGPNTPSSIFPNFPFFSPPTNPSP*
Homology
[Close]
BLAST of Csa7G066190 vs. TrEMBL
Match: A0A0A0K7G8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066190 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.0e-42
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MARFTLLIAFVATLLLSSLSSSSSSSSSIIVSRKLLASDFPGLPDFNVPPFYPEFKLPPP 60
          MARFTLLIAFVATLLLSSLSSSSSSSSSIIVSRKLLASDFPGLPDFNVPPFYPEFKLPPP
Sbjct: 1  MARFTLLIAFVATLLLSSLSSSSSSSSSIIVSRKLLASDFPGLPDFNVPPFYPEFKLPPP 60

Query: 61 FSFFGPNTPSSIFPNFPFFSPPTNPSP 88
          FSFFGPNTPSSIFPNFPFFSPPTNPSP
Sbjct: 61 FSFFGPNTPSSIFPNFPFFSPPTNPSP 87

[Close]
BLAST of Csa7G066190 vs. NCBI nr
Match: gi|700188528|gb|KGN43761.1| (hypothetical protein Csa_7G066190 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 5.7e-42
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MARFTLLIAFVATLLLSSLSSSSSSSSSIIVSRKLLASDFPGLPDFNVPPFYPEFKLPPP 60
          MARFTLLIAFVATLLLSSLSSSSSSSSSIIVSRKLLASDFPGLPDFNVPPFYPEFKLPPP
Sbjct: 1  MARFTLLIAFVATLLLSSLSSSSSSSSSIIVSRKLLASDFPGLPDFNVPPFYPEFKLPPP 60

Query: 61 FSFFGPNTPSSIFPNFPFFSPPTNPSP 88
          FSFFGPNTPSSIFPNFPFFSPPTNPSP
Sbjct: 61 FSFFGPNTPSSIFPNFPFFSPPTNPSP 87

The following BLAST results are available for this feature:
BLAST of Csa7G066190 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7G8_CUCSA4.0e-42100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066190 PE=4 SV=1[more]
BLAST of Csa7G066190 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188528|gb|KGN43761.1|5.7e-42100.00hypothetical protein Csa_7G066190 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU133583cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G066190.1Csa7G066190.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU133583CU133583transcribed_cluster